Id Trinity | FTRINITY_DN53075_c5_g1_i5 |
---|---|
Name Transcript | Ll_transcript_241968 |
Sequence | ATAACACACCCTTCCCTTAAAATTATGGAGCAATAATCTTGTTGCTGAATATTTTTTTCGCTACTTTGTTTTGGCTAAGCTAAAGCTCTTCCAAAGTGCA GGTTCAATATTGTGACACTAATGGGTCACCTTCTGAATCTACTCCATGTAACATCTTTCTTAACCAAACTAACTTTCTATCACTTCCCCAATTTACTTCA CCACAATACATGTTCTTATCCTCCAAAAGTTTCCAAATTTCAGAAATATCATGCTACCCCATTGGCTTTGCAAGGTAGTGGGGATATAGCAGGTCATGTT GAGAGCCCATTTAAGCATAAGATTTACATTAATAATGGAGGAGAGTTGAATGGTATTCCTCATATACAAACTCTTAGAGAATTTCCCAGGGCGGAGCTTT TTGAAAAGGTAGTCATGGTCCGATTTGATTCTAACATATTGCTCAAGCAAGAGTCTAACCAGACGACTCCGTCAGGTTTTAATGCACTTTTTACGATTAA ATATTTATATGAAGCTGGAGCAAAGGTAATCCTTGTAAGTGACTGGAATAGAAATGGTTCAGAGCTTCACACAGAGTCAGTTGCAGATTTCTTATCAGAA ATTCTCCAAATACAAGTTGTTCCAATGCAAGGCATTTCTTGTAACAAGCTAAAAAACGTGAAAGACCACATTAAAGAGAATATCCATCTTCTGGAGAATC TTTCTTATTTTAAAGACGAAGTTTCCAATTGCTTGGAGTTTGCTAGAGTATTATCGTCGGGAGTCGATATCTTTGTCAACGACTCCTTCTCCAACTCTCA TAAAGTTCTAGCATCAACGGTTGGTGTTACCCGCTTCTGCTATGCCTGTATAGCTGGTTTTCACTTTGAGGAGAGGCTCTGTCTACTGAAGAATGTCGGA GAAGCCAGCAAGAAACCATATGTTGCAATTATTGGTGGGGGTAATCTCTATGATAAAGCAGCATCTTTTCATTTTTTAGCATCCAAGTGCGAGGGTTTCT TGTTTGTTGGAATGATATCATTTCAAATAATGTATGCATTAGGAGTATCAGTTCCTCTTAATTTGGTGGACCGAAAGGCACTTGATGAAGCTCTAGACAT AGTGAGACTTGCTCAAGATACAAATGTACAAATTTTGTATCCAAAAGATTTTTGGTGCCGGAATAAACAGAATCCATCACAACTGCAAGTATTTCCTTCT CATGGAATTTCTGATGGTTGGGTGCCTGTTGACCTTGGACCGGTATCATTGGATGAAATAAGTTCCTTTCTTACAAATTGTAAGAAAATCATGTGGATTG GTCCAGTGAAATTTGTTGATTCAAGTAAATACACAAATGGGGCATCTAGATTGGCAGAAGTTCTTGATCAGCTAAGCCAAAGTAACTGTGAAATAACTGC AGTTGGAACTACGGCATGCCAACTAATGAGGCAGAAAAAAAGTTCATTATCCTTTATAAGTATGATTGAGAATGCTACAGTTGTCTGGGAATTTCTTAAA GGAAGAAAACTGCCCGGTGTTATGGCAGTAGACAGGGCATATCCTTTTGAAATCAAGTGGAATGATGTTTATTCTGATCCAGCTCAACCTCTTGTTGTTG ATATCGGAAGTGGTAATGGGCTTTTTCTCCTCGAAATGGCTAGAAGGAAGCGAGATTTGAACTTCCTTGGTTTGGAGATTAATGAAAAGCTTGTTTTGCG TTGTCTGGATTCGACTCATCAATATGGCCTTAAGAATGGGTATTTTATTGCTACTAATGCAACATCAACATTTCGTTCCATCGTTTCTTCTAACCCAGGA GAGTTAGTTCTTGTCTCAATACAGTGTCCAAACCCCGATTTCAATAAACCTGGGCATAGATGGAGAATGCTGCAGAGGTCTTTAATTGAAGCCATAGTGG ATCTTCTAGCATCTGATGGGAAGGTCTTTCTGCAATCTGATGTAGAAGCTGTAGCAATAAGCATGAAAGAACAATTTCTCAGATATGGCAAGGGTAAGCT TGATTTGGTGCATGGCCAAAATGAGTGGCTTGAGGAAAACCCTTTTGGAGTTAGATCAGACTGGGAAAAACATGTTTTAGAGCGCGGGGCCCCGATGTAT CGAATGATGTTTTCTAAATCATCTGATATTAGTGAAGTTTCAGCTGCAAATGATGTAATCCAAAAAGATGATTAATCCATGAAACCCCTCCAAGGGATTG CTGCTTTTGCAGAATCTTTCTATCACAGAGCTAATGGTTTCTCCCTGTCAGGCAATGTTGCAGGTACACTGTTTTTTCATGAATTTTATCTTATTATGAC ATGGATAAATTATGAAATAATAAGAGGCTGAGTCTCGGCACAACAGTAAGATTGTTTGTCTTGTGACCTGGAGGTCATCGGTTCAAATCCTGGAAATAGT CTCCTCACTTGTGAAGGTAAGGTTGCGTGTATCTCCCTCTCCATATCTTACTAGGTGAGAATCTCGTGTACTAGACCGCCCTTATATATGAACTCCGAAC TATTGATCTTGTGCAGGGTTCAAATTCCTAACATTTGGAATTATGTGAAGAGTTGTTAATGAGCATAATCAGATATTCAACAAGAGAATCTGATCAAGGA TGTCCAAAAGCTAGCATTGTGTAACTTTATATTGAAGTTATACAAGGCATAGAAAATCATAATTTCAAATACATGACATTTTGTCATTTCATGCATATAT ACACATCTCACTTGGTGAATGGTACAAAATTTGTGTAGGGAATGCAAAAAAGCCTAAATCTAACATTTTTTAGTTGACAACCAAACCAACTTTTCTTCTA GTGTGAATTTCATATTTGAATTTTACACAGAAAACACCAAATTATCACTTGCGCGGGAACTAACATCAATAAGATTTTGACAACACATTGATCATGGTTT CACCAATCTCAGTATGTGCAATAAGAGGTGGTGTGTATCATTGTGGCAAACCATACATTTAGTGTCAAGATTGGACTATCATATTCTGACAATACTATGT CACTTCTTGAGTATATCTTCT BLAST |
Tissue | flowers |
Gene name | LI_gene_30558; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_241968
Blastp | Phosphoglycerate kinase from Synechococcus with 32.5% of identity |
---|---|
Blastx | Phosphoglycerate kinase from Synechococcus with 32.5% of identity |
Eggnog | phosphoglycerate kinase(COG0126) |
Kegg | Link to kegg annotations (Synpcc7942_1116) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019442814.1) |
Pfam | Phosphoglycerate kinase (PF00162.18) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |