| Id Trinity | FTRINITY_DN53078_c1_g1_i7 |
|---|---|
| Name Transcript | Ll_transcript_241205 |
| Sequence | CAAGTAGCCCTATTATCATTCCTATTAACAACAACACTTTTGCATCGAAGAATAAGGATGAAGACCATAAAATATATAAAAATAATTTCATTTGTAGTGT TGTTTTTAAATAAATATGGTGTAGTTAATTATTTTTCAATGGGCCGGGCTGGAGTGGTGGAAGCCCAAGAAGAAAGGAGATTGGGGTTTTAAATGAATGA GGAAATCAAAGGTGGTGATTGTTGAAGTGGTAGAAGGAGTTGTTGTTGTTGTTGTTGTGTAATTGAATTGATTGATTCTGTTTGCGAAGGCATAGAGAGA AAGAGAGAGAGAGAGAGATAGAAGAAATGGAAGGAGGAGGTGAAGAAGTAAACATACAGGAATTGGCCTCCAATCTCTGTATATACAAAGATCAACTTCA CCAGGTCAGACAACTTTTAAATGATGATCCTGTTAACTCTGACTATGTCGACATGGAAAGGGAGCTTACTGAGGTGATTGCTTTGACTGAAGAGCTCCTT GCAACTGCAAGGCAAAATGAATTCTCTGGTTCAAGAGCTGGTCCAAATGCTAGTGCAGCTCCAAGCCCATCAAAGCACAAGGAGAATGAATTGGATCTGG AAAGTAGCTCTGATCATCAAGGGAAATTTTCTGTTGGCACTAAAGTTCAGGCAGTTTGGAGTGAAGACGGGGAGTGGTACGATGCAACAATTGAGGCTTA TACACCAAATGGTTATTTTGTGATTTATGACAATTGGGGTAATAAAGAAGAGGTGGATCCTGCCAATGTAAGACCAATTCAAGAAGGCACTGTCGATGCA TTGTTAGAAGCTGAGCGAGTTGCTGAGGCTACAAAACAGGCTATCAAACGTAAAATTGCACAGGCTGCATCTATTGATTTTCAATCAAAAAGTTTACCTG CAAAGCTTCGTATAGAGCCTGATGATCCAGAGGATGTGGTGAGTTGTTCCGGAAGACTTTCGTTCTCTGTTCTTTATTTTTCATACCCGTAAATATTTTC TAATTTCTTTGTGAGAATTGTTATCGCCAGTATTGATGGAGTGCTTTGGTTAGTCTCTCAATCTCTTTGCTGCTTTTAATAAAATATTGGATTACCCTTC TATCAAAATAAAAATAAAATTAAGTATTTGTTGATATGAAAACAGAAGTGCTTAGTCGTGGGATTCTGAAGCTTTTATTTTTTTACGAAGTTTATCTGCC AGTTAGTTAGGATGCTATACATCATATGTTTGCTAACTCAATGATTACAGAAAGCTTCCAAGCGGAAGAAAATACATGCCTTTAAGTCTAAGATGCGGAT AGAACAGCTTGAAGTCACACAAAATAAACGGCAAAATGCTTGGCAACAGTTTCAGTCAACAAAAGGAAAGACAAAAAAGGTTGGTTTCTTCTCAGGAAGA AAGCGGGAGAGTATTTTCAAATCCCCTGATGATCCTCAAGGAAAGGTTGGTGTGACTGGAAGTGGGAAAGGTTTGACAGATTTCCAGAAGAGAGAAAAGC ATTTTCATCTCAAGGATGGGACGGTTGAGAATGATGAATGATTAGGCTATATAGCTTTTAACCTTGCCATTAAATTGTATGTGACATGTACTTACAAAGT AAACCATTATTCACTTTAGAGGTCCATTGACTATGCATATGTTTTCATGCAAAATGCTTTGAAAGTCTTGTAATTTTAATAGTGCGATTAGTTTAATTAA GCTAAGGGTCCAATGTATTTTGCTTCAAATTTTATCTAAAATCTTGCTGCCTTTTGGACCTTCAACTTGCTTCATGCTCCAACCATAATAAACGGTGAGG TACCCATGTGTTAATCTAGAAAATGTTATTTCTTCTTTAAAACTATTTTGTAATCATGTAAATCAATAGTTCAGGGTCATTCCCATTTTATAG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_30580; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_241205
| Blastp | Survival of motor neuron-related-splicing factor 30 from Silurana with 33.56% of identity |
|---|---|
| Blastx | Survival of motor neuron-related-splicing factor 30 from Silurana with 33.56% of identity |
| Eggnog | Survival motor neuron domain containing 1(ENOG4110IGD) |
| Kegg | Link to kegg annotations (448621) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019463305.1) |
| Pfam | Survival motor neuron protein (SMN) (PF06003.11) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |