Ll_transcript_240780

• Id Trinity: FTRINITY_DN53080_c0_g5_i15
• Name Transcript: Ll_transcript_240780
• Sequence: TTCAATAGTAATATATTTGTGATATGGTGTAAGTGTAAACATCACTTAAATAATCTATACATGTATATAGAAATGAAATAGAGTATTTTTTGAGTCTTGG CTTATAAAAAAGGTAGGTTCTTGAAAGCAACTAAAAACATAGTCCCACTCTCCTAGAAACACTACAACATACTAGAATATTGGGTAGAAGCAGATTTTCA TTATTCTCCCTTCGTTATATTAAAGGTAAAGTTTTTATTAACATGTCAAAGTTTAATGATTCTCCCTTCGTTAAATTGGGTAGATATGATTTCTTCAATT TTATGCTTTTAATTATATCTCAATTATTTGAGTTCCAAATTCATATTATTTATGTTTTCTGTTTTAGTCTTCTCTTCAAAATCTTTGTACAAAATTCAGA AATAGTTTATACAATCAGTTGAAATCGTTACTTGCTTAATTGCTTTGTTTGTTAGAAGAAAGGATTGAGTTTGGAATTTTATAACAGTCAAATTTGTTTT TAAGTTTTAACCCTTTTTGTAAATGATGATTATGATTATAGTTATAGTGAAAATTAAGTTGAATTTGTACTGAATCATTTTTTGTTTCTGGTTAGTGTAC AACATAGTTTGTTCACATGGAAACTCTTTCATATGGTTCTGCACCATGTTGTCAAATTGTGAACTCAAACTGGAAATCAGTGGATAAGTCCTCGAATTCG CGTAAATCGAGGGTTTCTTATAATTCCTATAAGATTTCTATATGTGGGGGTGTGAGATTTTATGATATGGTGCTTCAGCAAAGAGGTTTTAGGCCACAAA ATTCTGTTGAAGGGTCAAGAAGAATAAAACTCAAGGTGTATAGTGGAAATTATGATGGTTATGTGATTGGTGAAGAGGAATCAAGAGATATTTCAGGGTT AGAGGAACATGCAACTAAGGTTCTAATTCCCGGTCTTCCAGATGAATCAATTGGTGAATCCGGGGTTTCAATAAGTAGTTGTTTTAGGGAATGGAAGCCT AAACTCAACATGCACTATGAGAAAGCTGGGTGTGAAAACTTCGGTTCCTCACATGTTCTCTTTCTTCCTGGCTTTGGTGTTGGTTCTTTCCATTATGAGA AGCAACTGAAGGATTTAGGCCGCGATTTTCGAGTATGGGCACTCGATTTTCTAGGACAGGGAATGTCTCTACCTTTTGAAGACCCTGCCCCTTTGTCCAA GGAAGGGACTACATCAAATGGAAATATTTCTTCATGGGGTTTTGGAGATGAGACTGAGCCATGGGCAGCTAAGCTTGTATATTCTGCTGATTTATGGCAA GAACAAGTTCGCTACTTCGTAGAAGAGGTCATTGGTGAACCAGTCTACGTTGTGGGCAACTCGCTAGGAGGATATGTTGCATTGTATTTTGCAGCATGCA ACCCACATTTAGTTAAAGGTGTCACATTGCTGAATGCAACACCTTTTTGGGGGTTTCTTCCTAATCCAGTAAAATCTCCAAGACTAGCCAAAATATTTCC ATGGGCTGGAACATTCCCCCTACCTTCAAATATAAAGAGACTTACGGAGTTGTTTATTTTACTCAAACTTCTCAATTAGGACATTTTCTGTATGGTAGCT GCAAATCCATTCACATATGAGTAACATAATATTAAGAAACACAACTTAAGGGTTAGTTTGGGAGTTGGATTTTGGAGGGGAACGAAAGGAAAAGGAAGGC TTGGGAGCCATGAAATACACTTTTGAGGTGGGAGAAAATTAGTGATCCTAAAAGTATCGCTGACGTGCTCAATCAGGTTTATGCAGATCATTCGACAAAT GTTGATAATGTGTTTTCACGGATAGTTGACATCACAAGGCATCCTGCTGCTGCAGCATCATTTGCTTCAATTATGTGTGCTCCTCAAGGAGAATTATCCT TCAGTGAAACATTATCTAGATGTCGAACGAACAATGTGCCAATCTGCCTCATGTATGGAAAAGAAGATCCATGGGTTACACCATTTTGGGGAGTTCAGGT TAAAAATAAGGTGCCCGAAGCTCCATATTATCAGATCAGCCCTGCTGGTCATTGCCCACATGATGAAGTTCCTGAGGTCATAAATTTCTTACTTCGTGGG TGGATCAGAAACATAGAGTCTCAGGGTTCTTTGTCCTTACCTTTGCTTGAAGAGTTAGACAGTATGAAACAAAATATTGACAGAGAGTTAGAATTTCCCA GAGAAGGTTCAAAAAAATCAGTGATGGTCAAATTTTTAGGTTCCAGTATCTCACTTTGGGACAGGATAAGATCTTACATTAAATCTGATTCCAAGTTCAG GAATTTGGCAGCCAAATCTCAATGATATGTCACACTATGCCCTCTTCAATGCCTCAAGTATATACCAACTTTGTATATTCTCTTCTCTTATTTATAGTTT ATAAAAATGTTTTAAGTTGCGATTACGATCGCGATTGCAATCATGGTTGTGGTTATTACGATTGTAGTCATTGCGACTATACAAGTTGTTTTAGAATCAG TCCTCAATGACTTTGCTTAATATCTATTCCCTTTTCTTTTAATTAAGAGTCTAACTTGAAGATTTGAACTATAATCTACCTATCACAAGAAAAGCTTTAT TGTTGTTCTGATATGTGTCATTTTTCTTCCCAACCAATCCTTTGTTAGTAACCTTTACTTGGCAAAGGGAAGGAAAGAAAGAAAGCAGGACATGTTTAAT TCTGGATAATCCAAATTCTTAAAATATGTGCACTGATAGTGTAAAGTTTTTTACATTGTCGCACATCATTCATCATTGATTTGTATTACTTTTATT
• Tissue: flowers
• Gene name: LI_gene_30602;
• Additional information: details;

Expression of Ll_transcript_240780

FPKM

• FPAB: 11.2
• FPNAB: 4.5
• LF1: 5.5
• LF2: 18.2
• LF3: 22.9
• LF4: 15.6
• UF1: 5.2
• UF2: 13.5
• UF3: 23.2
• UF4: 20.5

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_240780

• Blastp: Pheophytinase, chloroplastic from Arabidopsis with 66.53% of identity
• Blastx: Pheophytinase, chloroplastic from Arabidopsis with 66.53% of identity
• Eggnog: Alpha beta hydrolase(COG0596)
• Kegg: Link to kegg annotations (AT5G13800)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019425829.1)
• Pfam: alpha/beta hydrolase fold (PF00561.19)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;