| Id Trinity | FTRINITY_DN53085_c2_g3_i8 |
|---|---|
| Name Transcript | Ll_transcript_241771 |
| Sequence | CTTTTCTCCCTCATTTTCCCACAGTCTTAACCTCTCTCTCACTCTCTCTCTGAATAGGGCAAGAAATATATAACTTTATGTCACATAATTTCTCTTTAAA TATTCACTATACTTTGTCTTTAAATATAACAATAATCATATATATATATATAACATTTCTTGTAGAAGGAGAACTTAAAGGAGTCTGAGCTTTGAGTTGG GAAAGCAAGAATGCTTTGGGAGGATTTCTCCAACATATTTGGTGCAACAAAGCTCAGAACTATGTATTGGAATTCATGGCTTCCATTAGACTCACCATGC TTATTGGAGCATGTAGTTTTACCTGTGGAACTTGTGTTCTTTGTGATCTTATTAGTCCAAATTCTCAGAAAAAGTTTGAACCTGAATAGAAAGCAGAACA AACTCTCAGAACAAGGTATCACAGAGATGCATAATCCAACTGTGATAAAGTTTGGTTTTGCATACAAAATCAGCATAGTTTGCACCATTTTATTACTAGC TGTTCATGCATCAATGGTAGTGTTATTGAGTCTCAATCATGAGAATCAGTGTAACTCTGAACTTAAGGCTTTTACATCAGAGATAGTTCAAGTGTTATCA TGGGGAGTTAGTCTTATAGCAATGTTCAAGATATCAAAATCAAATGTTTATTTCCATTGGATTCTAAGGGTTTGGTGGATTTTCAGTTTCATTCTGAGTG TGATTAGTACTACTCTTCATGTCAATTTTAGTTTCGCGAATATCGGTCAAATTGGTGTAAGAGAATATGCAGATTTCATTGGTTTGATTGCTTCAACAAT CCTTTTGATCATATCATCAAGAGGGAAAACAGGCATTGTGTTAATTGCTGCTACAAATGGCTTATCTAACCCTCTTCTCGGAGAGAAAACGGAGAAAATT TCGGAGTGTGAAAGGGAATCTCCATATGGAAAATCAACTTTTATGCAACTCATTAGCTTCTCCTGGCTCAATCCCTTGTTTGCAGTAGGATACAAGAAGC CTCTTGATCAGAACGACATTCCGGATGTCGATATCAAGGACTCTGCCGAGTTTCTAACGAGTTCCTTTAATGAGAGCCTTAGACAAGTCAAAGAAAAAGA CGGTACTACAAACCCGTCTATCTACAAGGCAATCTATTTGTTAGCTAGGAAGAAAGCAGCGCTGAACGCGCTTTTTGCAGTAATAAGTGCTTCAGCGTCA TATGTCGGCCCGTACTTGATTACTGACTTTGTGGATTTCCTAGGGGAAAAGGAAACTCGTGGCTTGAGGACCGGGTACCTTCTATCGATAGCCTTCTCGT GTGGCAAAATGGTTGAAACAATATCTCAAAGGCAATGGAATTTCGGAGCGAGGCAGTTAGGCCTTCGCCTCAGAGCTGCATTGACAACACACATATATAA GAAGGGCTTGAACCTGTCGAGTAGATCGCGCCAAAGTCATTCGGGTGGTGAGATAATGAACCTCATGAGTGTAGATGTGCAGAGAGTCACGGATTTCGTT TGGCACGTAAACGTAATTTGGATGCTGCCTGTGCAAATTTCTTTGGCAGTCTACATTCTGCATACAAATCTCGGATTAGGTTCATTGGCTGCATTAGCTG CTACATTGGCTGTTATGACTTTGAATATACCTCTCACCAAAATACAGAAGAAATATCAATCCAAGATCATGGAGGCTAAGGATGAAAGAATGAAAACCAC TTCGGAAATTCTGAGAAACATGAGGACTTTGAAGCTTCAAGCATGGGATACTCAATTTGGTCAACGGATCGAAACATTGCGGAAAAATGAGTATAATTGG TTAATGAAGTCCTTAAGACAAGCTGCACTTTCTGCTTTTATCTTTTGGGGATCACCTACATTCATTTCTGTGATAACCTTTTGGGCATGTATGTTCATAG GAGTTGAACTTACGGCTGCAAGGGTCTTATCGGCTTTCGCAACGTTCCGAATGTTACAGAGTCCTATATTTAGCCTGCCTGATTTACTCAATGTCATTGC TCAAGGAAAAGTTTCGGTTGATAGGATTGCTTCTTACCTTAAGGAGGAAGAAATCCAACACGACGTGATTGAATATGTCGCGAAGGATAGAACAGAAAAC GACATAGTTATTGATAAAGGGAGATTCAGCTGGGATCCTGATTCAAGAAGTCCAACCATTGATGAGATAGATTTAAAGGTTAAGAGGGGAATGAAGGTGG CAATTTGCGGATCCGTAGGTTCCGGCAAATCTAGTCTTCTCTCGGGCATTTTGGGAGAAATATATAAACAGTCCGGGACAGTGAAGATCAGTGGAACAAA AGCTTATGTTCCGCAGTCGCCGTGGATTCTAACAGGAAACATTCGGGAGAATATTACCTTCGGAAAGGAGTATGATCATGAGAAGTATGAAAAAACAGTG GAAGCTTGTGCATTGAAAAAGGACTTTGAGTTATTCTCCTGTGGTGATCTCACAGGGATAGGAGAAAGAGGTATCAATATGAGTGGAGGACAGAAGCAAA GGATACAAATCGCTCGAGCAGTTTACCAAGACGCCGACATATATCTTCTCGATGACCCTTTCAGTGCTGTTGATGCTCATACCGGCACACACCTCTTTAA GGAGTGCCTAATGGGGATTCTGAAAGAGAAAACCGTGCTTTTCGTCACACACCAAGTTGAGTTTCTTCCAGCAGCAGACCTCATTCTGGTGATGAAAAAT GGAAAGATTGCACAAGCCGGAAAATACGAAGAACTTCTAAAGCAAAATATAGGATTTGAAGTTTTAGTAGGTGCTCATAATGTAGCTCTAGAGTCAGTTC TAATGGTTGAAAAATCAACTAGAACAGCTCTAGCCGAAAGGGAATCGAACATCAATTCCAGCTCAAATATTAAACCTGTGCACATACAGCGTGACTCGGC GCAAGATAATCCTCCGGAGAGCAAAGGAAATGAAGGAAAGTTGGTACAAGATGAAGAAAGAGAAAGAGGAAGCATATCAAAAGAAGTTTACTGGTCTTAT ATGACAACTTACAAAGGTGGAATTATGGCTCCAATCATAGTTTTGGCACAGACTTCATTCCAAATACTTCAGATTGCAAGTAACTATTGGATGGCTTGGG TTTGTCCGACAACAACCGATGCTAAGCCTTTATTCGAGATGAATTTCATACTACTTATTTATATGGCACTATCTATTGCTAGTGCACTTTGTGTTCTTCT GAGAGCTATGTTGGTAGCAAGTGTTGGACTTGAGACAGCACAGACACTTTTCACAAACTTGTTGCATAATGTGCTCCGAGCACCCATGTCGTTTTTCGAT TCAACCCCAACTGGAAGAATCTTGAACAGGGCCTCCTCAGATCAAAGTGTGTTGGACTTGGAAATGGCAACCAAGTTAGGATGGTGTGCCTTCTCCGTAA TAGAGATTCTCGGCACTATTGCCGTAATGTCGCAGGTAGCATGGGAAGTATTTGTCATCTTCATTCCAGTAACTGGAATCTGCATATGGTATCAGCGATA TTATACGCCGACAGCGAGAGAACTGGCTCGCTTAGCACAGATACGAATTTCTCCAATTCTCCACCATTTTTCCGAATCTTTAGCAGGAACAGCATCGATA AGAGCCTTTGATCAAGAAAGCCGTTTCGTATACACAAATCTCGGTCTTGTAGATGGCCACTCAAAGCCATGGTTTCATAATGTGTCTGCAATGGAATGGC TTTCTTTCAGATTGAATTTACTTTCGAATTTTGTTTTCGCCTTCTCGCTGGTTTTGCTAGTGACCCTCCCTGAAGGAATAATCAATCCAAGCATTGCAGG GTTGGCAGTAACATATGGTATCAATCTGAATGTTTTGCAAGCTTCAGTTATATGGAACATATGCAATGCAGAAAATAAGATGATATCGGTCGAACGAGTT CTTCAGTACTCAAGTATACCACATGAAGCACCTCTTGTGATCGAAGATTCCAGGCCACCTAGGAACTGGCCTGAAACCGGAACGATTTCTTTAAAAAATT TGGAGGTACGTTATGCTGAGCATCTTCCGTCTGTGTTGAAAAACATCACTTGTACATTTCCTGGAAGGAAGAAAATCGGTGTGGTAGGACGTACCGGTAG TGGAAAATCGACCCTCATACAGGCCCTTTTCCGGATTGTTGAACCTAGAGAAGGAAGCATTATCATTGACAATGTAGATATATGCAAGATAGGCCTCCAT GACTTGAGAACAAGGCTTAGCATCATTCCACAAGACCCTTCACTATTTGAAGGCACAGTTAGAGGAAACTTGGATCCACTGCAGCAATACTCAGACAATG AAGTTTGGGAGGCTCTAGATAAATGTCAGCTAGGTGATATAGTAAGAGACAAGAAACAGAAGCTTGAATCACAAGTGGTTGAAAATGGTGAGAATTGGAG TGCAGGCCAAAGACAATTATTTTGTCTAGGAAGAGCCTTACTCAAAAAAAGTAGCATACTAGTGTTAGATGAAGCAACAGCCTCAGTGGACTCTGCTACT GATGGTATCATACAGAAGATCATCAGTCAAGAGTTCCAAGATCGGACCGTCGTCACGATAGCCCATCGGATCCACACCGTTATCGATAGCGATTTGGTTT TGGTGCTTAGTGATGGGAGAATTGCAGAGTATGATGAACCATCAAAGTTACTTGAGAGAGAAGATTCATTCTTCTTTAAGCTTATAAAGGAGTATTCAAG GAGATCACATACTTTCAACACCATGGAATAATTCAAGGACATTATGGAAAGGGATTCTTAGTGGGACAAAAAGTCTCCAAAATATCCCAACATGTTCCAA AAATTGTGTCACTTAGTAATACGCTACTTTTTCAGAAAAGTCGATACAAAATGTCACAGTTTTTGGAACGGAAGATGTGATCCCTTTAAATAAACCACTA GTGATACAAATAAAGGGATTATTGGCCCTATGTGAGGTAGTATTGTTGTAATACTTATTCCAAAATAAAATTAGATATAGGCTATAGTTTTGAGTATCAA AGAGTAAACTTGGAGACTAGAATTAATGTAAGATTTCATATGTATAATAGATTTAGAACATCAATAAATATTAAGATTGCATATCTCTTGAAGATATATT TTTCAC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_30642; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_241771
| Blastp | ABC transporter C family member 9 from Arabidopsis with 63.03% of identity |
|---|---|
| Blastx | ABC transporter C family member 9 from Arabidopsis with 64.5% of identity |
| Eggnog | (ABC) transporter(COG1132) |
| Kegg | Link to kegg annotations (AT3G60160) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019463470.1) |
| Pfam | ABC transporter transmembrane region (PF00664.22) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |