Ll_transcript_243148

• Id Trinity: FTRINITY_DN53095_c2_g1_i6
• Name Transcript: Ll_transcript_243148
• Sequence: CCTCCATTGGATGCTCCCTTGATGTAACCCTATTTCCCCTTTTCACCTTTTTTAGGGTTCCAATTTCAATTTTTTTAAAAAGTGCTCTTTGGAATTTTAT TACTGTGATCTCTCGATTTTAGATCAAATCATTAATGGGGTTGTCTTAATTTTTGTAATTAATGTTGGGTTTCCAGAAATGTGGCATTTTGTTTTGAAAC TTTCATTGGGTCATGTTCATCTTAGCTTGGTTTTTGACTTCTCTGATTTGAGAACTGGAGGATTTTGTTGATTGATGCTCATTGTGATAATGATTTTGCA GATAATTTCTCCATATCACTTGTACTTGAACCCTAGACTGGTAGTGAAACAATATCAGTATTGGCGTCTAGTTACTAATTTCTTGTACTTCAGGAAAATG GGTAAACTTTTCGCTGCTCATCTTTTCAATGATTTTTATACATTAAATTGACGTGTTGGTTTCTTATTTACTTCAATTTAGTTCCATTGTGGCAACATTT TAAATTATTTTTTATTTTTTATTTTTACGTTAACATACCCCACTAAGTGGAGCCTTTTGCACAAACCAAACCGATATGGTTATGGTCTATGGATGAGATG CACCCATTCTTTGAGTGAGCAGTCAATCTAAGGGTGAATTTGGTGCAACCGTAAGTTTATTACTTAGTAACCATGAGGTCACGACTTTAAATTCTGGAAT CAGTCTCTCCGCTTGCAGGCGTTATGTCTACGTCTACCCTCTCCAGCCCCACTAAGTAGGAGCCTTGTGTACTTGGTCATCCTTATTTGTAGTCAATCTG ATCCTCTTAATAGAATTTAAGGAGAATGGATGTGTACAAAGTTCCAGCTTCAAGAAATTAAAGCATTAAACTAGGCTTTTGTGGCCTTGTGGGCCTATCA GAAGCAACAACATTGTTTTATTTGATTCCTTGTTGCTTTGAGGGCATAGCATATTTCTTGCTTCATATTTAGGCAAGAACGTAGTTACAAAATTTGCGAA ACTCCCAAATCTATCGTAAATTGGATCATGCATTTCAGACCATGGTGCTTTTGCAATAGTATGGGTCCAGATTGCCCAAATGCAATCCATCCCCACAGAT AAGAAGGAAGTGGCAGATTGAAGCTTACACTGATGGTTTGATTTGATGTGTACATAAATCACTAGTCTCTTAATTTAAATGGGTTTATAATGTATAACAC AGCTCCGCCATGCCCATGTACAACCCTTTTCTTTTTGTCAGCACCTCCTGTCATGATTTATTACTCTCGAGTTCTTGACATACACCAGCCATTTTCCTAA ATTACAATGACACACAGCAAATCCCCTCTAACAATCACGTATGATAAATTGTTCCTCTGCTTTTGTTAGTCCAGCATTTAAAGCAAACTTCTTGTGCTTA TCCCTTTTTTAACAGATATCATATACACGAATAGGCATATTTGCCTGCAACAACTGCATATTCTCTGCTCATATTTGTTTCACATTGTTCGATATCTAAT TTTAAAGCTGTCAATTATATATCTAACATTGACCCAATATTTTCTTATTGAATTGGCAGACTTGGATTTCTTGTTTCATATGTTTTTTCTTGCTCGGTAC TGCAAGCTTTTAGAGGAGAACTCGTTCAGAGGGAGGACTTATGATTTCTTGTACATGCTCTTATTTGGTGGCACTGTATTGACTGGAATTGTTCTACTTG GTGGGATGATACCTTATTTGTCAGAGTCCTTTGGAAAAATTATATTCCTTAGCAACTCATTGACATTTATGATGGTTTACGTTTGGAGCAAACAAAACCC CTTCATTCATATGAACTTCCTAGGCCTCTTTACCTTCACTGCTGCTTACCTTCCATGGGTTCTCTTGGGATTCTCTGTCCTTGTTGGTGCTAGTGCCTGG GTGGATCTGCTGGGAATGATTGCTGGTCATGCATACTATTTTCTTGAAGATGTGTACCCTCGGATGACTGGTCGTCGACCCCTTAAAACACCATCATTCA TCAAAGCTCTATTTGCCGATGACACAGTTGTCGTAGCACGACCTGACAATGTCCGATTTGCTCCCCCACCAGCCGAGCAACTTCACCAAGATTGAAGTAA TGAGAAGCATAATAGCCAGAGACACCAAAGTGGTTATAACCTTGTAATATATAGATATATACGTTTTTCCCTGCGTGCATATCACGATTTAAGGTGCACT ATGATGAATGTCCAAAGTTTTTTGTTAAATGAGATAACTTAGTTTCCCCTTCCTCTTTAGCCCATTTCTTGTACCAAACTCCATCTCGTAGATATTGATT CTCCTTTTTTGTTCTAATTATTATCACCTCTCACTTTCCAACTATCATTCCTAATACTAAAATCCTCGGCATGAAGCATCTAACACTGACTTGTGGTAGT AGTTTCTCAAGAATGAAAATACAATTGAGATATCTTATACCATATGTAATGCAGTTTTCTTTCTCTACATAGAAAATATTAATGACTGGG
• Tissue: flowers
• Gene name: LI_gene_30740;
• Additional information: details;

Expression of Ll_transcript_243148

FPKM

• FPAB: 0.6
• FPNAB: 0.3
• LF1: 0.4
• LF2: 0.3
• LF3: 0.1
• LF4: 0.3
• UF1: 0
• UF2: 0.2
• UF3: 0.3
• UF4: 0.1

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_243148

• Blastp: Derlin-2.2 from Arabidopsis with 85.96% of identity
• Blastx: Derlin-2.2 from Arabidopsis with 74.3% of identity
• Eggnog: Derlin 1(COG5291)
• Kegg: Link to kegg annotations (AT4G04860)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019439814.1)
• Pfam: Der1-like family (PF04511.14)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;