Id Trinity | FTRINITY_DN53101_c0_g1_i3 |
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Name Transcript | Ll_transcript_223022 |
Sequence | AGGAGATAAATTATGATGGAAAAGGTGAATTAAAAACATAAACCCTAAAACTAAAACCTCAATTATCTTATGTAACTTCTCCCAGTTTTCGTGTCTGCCT CTCTAATCTTCCACCGCCGTCGACCACCAACCACTGTCGCCGGCCGAGTTCGGCGTCGACCACCCTTTTTCTGTTCTGCACCAAAATCGTTTTGCTATTT GTTCTCACCTCTCAAAGTTTGTGTTTTTAACCTTTTTTGTTGTAGTTTCAGTGCTTATTTTCCGATACTTGGTTAAGCATATGGCTTGTGTTAGGGAAAT TGGGGTCTCTGAAATCCTCCAGGGTAATTGCAGGCAATCGTTGTTTTTAGGGAAGAAGTTTCAGAGACAGAGGAATGGGAGTCGTTTGCATTGGGGTACA CTTTGTTATAGGAATCGGGTACTCGGTTCAACTCGAAAAGCATTGTCTTTAAGGTGCCATGCTCAGGAAAATCCTAGAGCTGTGGTGTCCGGTGGTGCGA GCAGTTCAGTTGGTGACAAATCTGGATTGGTTGAGAAGCCTGGGTCCGAAGTGATTCATTTGTATCGTGTACCGTTTATACAAGAAAGTGCAGCTGATGA ACTTCTGAGGGGAGCTCAGACAAAAATCTCTAATCAGATTGTGGACTTGCAGACCGAGCAATGTTATAATATCGGCATCGAGTCATCGCTTTCTAGCAGC CAGCTTTCTGTTCTTAAATGGCTTCTTGGAGAAACATTTGAGCCTGAAAATCTGGGACCTGAGAGCTTTCTTGAGAAGAAAAGGAAAGAGGGTTTGAATA CAGTTATTGTAGAGGTTGGCCCCAGGTTGTCGTTTACCACGGCATGGTCTTCTAATGCTGTGGCAATTTGCCAAGCATGTGGATTGACAGAAGTGACTCG TTTGGAAAGATCAAGGAGGTACTTGTTGTATACCACTAGCGAATTACAAGATCATCAAATCAATGAATTTGCATCTATGGTGCATGATAGGATGACCGAA TGTGTTTATGTTCAGAAGCTAACGTCCTTCGAGACCAGTGTAGTTCCCGAGGAAATTTACTACATACCTGTCATGGAGAGGGGACGTAAGGCGTTAGAAG AGATTAACCAGGAAATGGGTTTGGCCTTCGATGACCAGGATCTAGAATACTACACTAAACTGTTCAGAGAAGATATCAGGCGTAATCCAAGTAATGTGGA GTTGTTTGATATTGCACAGTCCAACAGTGAGCATAGCAGGCACTGGTTTTTTACCGGAAAGATATTCATTGATGGGCAGCCGGTGAATAAGACTCTTATG CAAATTGTGAAAAGTACTCTACAGGCAAATCCAAATAACTCAGTTATTGGCTTCAAGGATAACTCAAGTGCAATAAAGGGTTTTCCAGTAAAGCACTTGC GACCAGTTCAGCCCGGTTCAGCGTCTCCATTAAACTTAACAGCGCGTGAGTTAGATATATTATTTACAGCTGAAACACATAATTTTCCTTGTGCAGTGGC ACCTTATCCTGGTGCAGAGACAGGTGCAGGCGGTCGCATTAGGGATACCCATGCAACAGGAAGGGGGTCCTTTGTCCAGGCAGCTACAGCTGGTTATTGT GTTGGGAATCTCAATGCACCAGGGTTTTACGCTCCATGGGAAGACCCATCATTTACCTATCCATCAAATTTGGCACCACCTTTGCAAATTCTTATTGATG CTAGTAATGGTGCATCTGACTATGGTAATAAATTTGGAGAGCCATTGATCCAAGGATTCTGTAGAACCTTTGGAATGAGACTTCCTAGTGGGGATAGGCG GGAATGGTTGAAGCCAATCATGTTTAGTGCAGGCATTGGGCAAATTGACCACCATCATATATCAAAGGGAGAACCTGAGATTGGAATGTTGGTTGTTAAG ATCGGAGGCCCTGCTTATCGTATTGGGATGGGAGGTGGGGCAGCCTCAAGCATGGTCAGTGGGCAGAATCTTGCAGAGCTCGATTTCAATGCTGTGCAAC GTGGGGATGCTGAGATGTCACAAAAACTGTACCGCCTTGTTCGTGCTTGCATTGAGATGGGAGATAACAATCCAATCATCAGCATTCATGACCAGGGAGC TGGGGGGAACTGCAATGTTGTAAAGGAAATTATATACCCAAAAGGTGCAGAGATAGATATTCGAAAAATTGTGGTTGGTGATCATACAATGTCTGTTCTA GAAATTTGGGGTGCAGAGTATCAGGAGCAAGATGCTATCTTGGTGAAGCCTGAAAGTCACGAGCTCTTACAATCAATCTGTGAAAGGGAAAAGGTTTCAA TGGCCGTGATTGGAACCATTAGTGGTGATGGACGTGTTGTTTTAGTTGACGGCTTAGCAACTCAGAAGTGTCTCTCAAGTGGACTCCCTGCACCTCCCCC CGCTGTTGATCTTGAACTGGAGAAAGTCCTCGGTGACATGCCTCAGAAGTCTTTCAAATTTCAGCGTGTTGTTTATGAGCGGGAACCACTTGACATTGCC CCTGGGGTCACAGTAATGGATTCTCTGAAGAGGGTTTTGAGTTTACCATCTGTCTGTTCAAAGCGCTTCCTAACGACAAAAGTTGATAGGTGTGTTACGG GTCTTGTCGCTCAGCAGCAAACAGTTGGCCCTTTGCAGATACCCCTTGCTGATGTTGCTGTTACAGCTCAGACTTTTACTGATGTGACTGGAGGTGCATG TGCTATTGGAGAGCAACCAATCAAAGGGTTGTTAGACCCCAAGGCAATGGCTCGGTTGGCTGTCGGAGAAGCCCTCACAAATCTTGTATGGGCAAAGGTT ACTTCCCTTTCTGATGTCAAGGCAAGCGGAAATTGGATGTATGCTGCTAAGCTTGACGGTGAAGGTGCTGCCATGTATGATGCTGCTATATCTTTGTCTG AATCAATGATTGAACTTGGCATTGCTATTGATGGAGGGAAAGACAGTCTCTCTATGGCAGCTCATGCTGGAGGAGAAGTTGTCAAGGCTCCAGGAAATCT TGTAATTAGTGTGTATGTTACTTGTCCTGATATTACAAAAACAGTGACACCGGATTTAAAACTTGAAGATGATGGTATTTTGCTTCATATTGATCTGTCA AAGGGAAAGCGACGGTTAGGTGGTTCTGCTCTTGCCCAGGCATTTGACCAAGTTGGGGATGAGTGTCCTGATCTTGATGATATTCCTTACCTTAAAAAGG TCTTCGAAGGTGTTCAATACCTTCTTACCGATGAACTGATCTCTGCTGGTCATGACATCAGTGATGGCGGACTGTTAGTTTCTGCCTTGGAGATGGCTTT TGCTGGTAATCGTGGATTTACTTTGGACTTGGCTTCACAAGGCAACAGCCTTTTCCAAACGCTCTATGCAGAAGAGCTTGGATTAGTTCTTGAGGTAAGC CAGAAAAATCTGGCTATTGTATTGGATAAATTGAACAGTGTGGGAGTTTCGGCTGAGATCATAGGACATGTAACTGTCACACCTTCAGTTGAAGTGAAGG TTGATGGGGTAACTTGTATCAAGGAGGAAACTACTATCCTTAGGGACATGTGGGAAGACACTAGTTTTCAGCTGGAAAAGTTGCAAAGATTGCCGTCTTG TGTGGATATGGAGAGAGAAGGACTAAAACATCGTTATGAGCCCAAGTGGGGACTGTCCTTTACACCTTCCTTTACTGATGAAAAATATTTGTCTGCCGCG TTAAAACCTAAAGTAGCTGTGATTAGGGAAGAAGGAAGCAATGGAGACAGAGAGATGGCTGCTGCATTTCATGCTGCTGGTTTTGAACCATGGGATGTTT CCATGTCAGACCTTCTTAATGGAAAGATATCTTTGCAATCGTTCCGTGGAATCGTGTTTGTTGGTGGATTTAGCTATGCTGATGTGCTTGATTCTGCAAA AGGTTGGTCTGCTTGCATAAGATTCAATGAGCCCCTTTTAAAACAATTTAATGAGTTTTACAAGCGTCCCAACACTTTCAGTCTTGGTGTATGCAATGGG TGTCAACTGATGGCATTGTTGGGATGGATACCGGGCCCTCAAGTTGGAGGTGTGCTTGGTGCTGGTGGTGACCTCTCACAGCCTAGGTTCATTCACAATG AATCAGGGCGGTTTGAATGTCGGTTTACAAGTGTGACAATAAAGGACTCACCAGCTATAATGTTCAAAGGTATGGAAGGTAGTACATTGGGGGTTTGGGC TGCTCATGGTGAGGGAAGAGCTTATTTCCCCGATGAAGGTGTGTTGGAACGCATAGTTCATTCAGACTTAGCTCCTGTGAGATATTGCGATGATGGTGGC AATCCAACGGAAACATATCCCTTTAACGTGAATGGCTCTCCTTTAGGTGTAGCGGCAATTTGTTCCCCCGATGGTAGGCATCTTGCCATGATGCCTCACC CAGAGCGTTGCTTCTTAATGTGGCAGTTCCCGTGGTATCCAAAGCAGTGGGATGTGGAAAAGAAGGGGCCTAGTCCATGGTTGCGTATGTTCCAGAATGC AAGAGAGTGGTGTTCCTAAGATTATCAATTTTCTTTCTTTCCTTTTTCCTTCATTTTAATTTCCCCGCTCCAATAATTTACAGACAGGTTTACGAGTTTG CAAGTTCTTCTACTGGTCTACACTGGTTAAACTCTTGCAGTTTTGCTCTGAGAAATACATCTGTAAGATATTCTATTTCCAAATAGAGACTTTCAGATTT GCTTAATATCCTTACATATTTTGGTCTTTACTAAGTCAGTTCCATACTTGCCATTAGTGTACTAAAGAATAATCCGATAATCAATGAATCTTTTGTATGT AATCTATATTTTGGTAAATATTTCTGAGTGTTGTTCTTTTTGGTGACTATTTGTTGCATGCTTCTCTAGATGTCAACATCTTGTGTAATACTATTTTCAA TGGTTGTTGAAATCTTTTACCTCTGCATGATGAAAATTTTGTAATGCCTTTGTGTGTCTCCCCTTTGTTATAAGTTCTTTTTCTTGCATGTTCCTTGTCT GAGTTGGAGCTTCTATCTTCTGAGCTTATGGCTAATGTGGTTGGGCCGGAAGAGTGAGCTGGCGACGGTCTTAGGGGTGTCATTTTTGGGGTTTGAGGAC AATGCTGGATTGGTTTATACCTTGGCTTATTATTGTATGTACTTGAGTCTTAGTGAATTTGAATGTGTGATTAAGTTAGTGAGCCATGACATGTATGATA GATCTGTTTGGAGTTTGATGCTGTCTTCATACTTTCATTTAAGGCTTCCTTTGGCACTTTTCTTCAACCTGCTATCTATGGTATTAGACATCCTTTCTGT GTTTCAATATCTGAAATGAGGTTTTTCTTAAGTCATGGATGTTGCTTGGTAGCAAATTGAAAATAAAATAGATGTTGGGGCTGTGAATTCCCTCAGAATT GTTTCTTTTGATAGTGTTTCTTGT BLAST |
Tissue | flowers |
Gene name | LI_gene_30786; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_223022
Blastp | Probable phosphoribosylformylglycinamidine synthase, chloroplastic/mitochondrial from Arabidopsis with 78.74% of identity |
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Blastx | Probable phosphoribosylformylglycinamidine synthase, chloroplastic/mitochondrial from Arabidopsis with 78.32% of identity |
Eggnog | phosphoribosylformylglycinamidine synthase(COG0046) |
Kegg | Link to kegg annotations (AT1G74260) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019419036.1) |
Pfam | AIR synthase related protein, N-terminal domain (PF00586.23) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |