Ll_transcript_223790

• Id Trinity: FTRINITY_DN53103_c1_g1_i4
• Name Transcript: Ll_transcript_223790
• Sequence: TGTATTTCTTTCATTTTATGCATGTTTCTTCTCATTTCTCTGTCAAAAATCTCTTTTTTATTTCTATCTCCCTTTTTCTCCTGAAAGTTATGCTTCCATT AATCGTTTTTTTCTCTATTTGGAATTGGATCTGTGTGTGGTTTAAAGGGGATTAGTTCCCAGATTTACTTTTATACTATTTTTCTGAGGTTTAAAATATG GGTCAATATTAAGGTTTTGAGAGCTTTGAAATTGTTTTTCTATTATGCAATTAATAGTTTCTTCATCATATTATTTTTTTTATTTGTGCCTTATGTTCCT GTAATTCAATTTATAGTTTGCATTTCTGTCTTTTTTCTCTTAATCTATGTCCCCTATTGTTTTGAAGAGTTGAAAACAAGTGAAAGTTTAATTTTTTTTC CTTCACAACTCTCCCAAAATGAAGAGAAGTGAAAGTTAGTTTAGGGCTTTAGGCATTAATGCATTATATATTTTATATTAATATTGTTGTTATGATATAT AAAAGAGTTCAATTTTGATCAATTGCTTTTTTTCCTGCATTACTCAATTTTGAGCAATTGTTTTTTTACTGCGGATGGACCTCATTCATATTCTTTAGTT TGTGTTTTTAGTTTCCGATGTACCAAAAAAACTCAAGCATTTGTTTTGTTATTCTTTGTGAACATTTTCAATTCCATGTTTTTGTGCTTGACTGACAACA ACCAGTTATCCAGAACCGAGCCCGCGCAAAATGAGTTCAAGAAGAGGAGCAAATGGAAGACCTTTTCCAGGCCCCAAACATGATGGTTCTTCTTCCAAAG GGAAAGGAATAGCCGAGCCTCGACCAAAAATTGAGCAGTTGAGTCAGGGTCTTCTTGATGTTAACATAGGCCAAGAACAAGATGATGGTGAATGGGAGGT ACAAGCAAGGAAACCCAAAAACCGAGCTGGGAGCGGTTCTGCAAGACAATGGGGTCCTCCAGTTCATAATTCTAATCCTAGAGGAGCCGGGAATGTAGGA ATGGCTCAAAGGCAAGGCACTTGGAATCATGGAGGAGTTGGAAGGGCTTCTGGAAATCCTAGGCAGACACAAAATGGCGACTTCAGGAGACCCGTTGGCA GAGGAAATGGAAGGGCTCAGTTAACTACAAACGGACCTAAGGGATCCAATGTGAATCCGAATCCATTAATCCGACGTCCTCTTGAGCACGGGTGGGATTG GCAATCTAGAACTGGTTATCAGCCGTCTGATGATATTAGCCAGGTAACCGACGAAACTGCACCGGATTCCCCTCTGAATAATAGTGATGTGGATGATGAA GTGGAGGAGGGCTTTGATGATATGGAAGATACTGATGATGATCTGATGAGTGATGACTATGATTCTGATACTAGTCAAAAGAGCCATGAGACTCGTAAGA AGAGCAAGTGGTTTACGAAATTTTTCGCGATTCTGGATACCCTAACTGTTGAACAGATCAATGAACCTGAAAGGCAGTGGCACTGTCCAGCTTGTCAGGG TGGTCCTGGTTCTATTGATTGGTACAAAGGTCTGCAGCCTCTGCTTAACCATGCCAAAACAAAAGGGTCAAAAAGGGTGAAGATCCATAGGGAGCTTGCT GTAATTTTAGATGAGGAATTACGCAGAAGAGGTACTTCCGCAATTGCATCTGGAGAAGTATTTGGTAAATGGAAAGGTTTAAAAGATGAGGAGAAAGATC ACGCAATAGTTTGGCCTCCAATGGTTGTCATTCAGAATACACAGCTTGAACAAGATGAAAAAGAGAAGTGGATAGGTATGGGTAACCAGGAGCTTCTGGA TTATTTTAGCACATATGCTGCTGCGAAAGCTCGACACTCTTATGGCCCACAGGGTCATCGTGGGATGAGTGTTTTGATATTTGAAGCCTCGGGTAGTGGT TATCTAGAGGCAGAGCGTCTGCACAAACATTTTTCGGAGCAAGGAACTGATAGAAATGCTTGGTTTAGTAATCGACGTATTTTATTTCTCCCTGGTGGGA ACCGGCAGCTCTTTGGATACATGGCTACTAAAGAAGACCTGGAGAGTTTCAACAGGCATTCCCAAGGTAAGTCCAGACTCAAATACGATATGAGATCATA TCAGGAGATGGTTGTTAACCATATCCGACAAATGAGTGAGGAAAACCAACAACTTATCTACCTTAAGGACAAGGTTGCCAAAGGACAAAAACATACTAAA GCTCTTGAAGAATCTTTCGGTATTGTGACTGAGAAGCTGCGTAAAACAATGGAAGAAAATCGCATTGTGAGGCTAAGAGCTAAAATGCAGCACGAAGAGA ACAAAGAAGAGATGTACATGCAAGAGCAATTCTTTAGGGACCAGATCAAAGTCATTCATGATTCAAGGAATGCTAAGGAGGAAGATTTTGAGAGGATGCA GCAGGAGGAACGCGAGAAGGTGAAGCAGTCAAGCAATGGTCCTTTAAATGCAGAGGAAAGGAAACTCAAGGCTGATGAATATCTAAAATTTGTGGAGGTC CAAGACAAAGAGATGGAGAACTTTGTTGCTGAGAAGGAGAAACTGTGTCATGCTCATGAGGAAAGTCTTGCTGCAATGAGGAAGAGGCATTGGGAGGAAG AGGTGCAGATGGAGACAAAGTTCAATGAGGAACTAGCCAAACTCATGGAAAAGTACTCCCCATCTCACTTGGAGATTAAGTCCAATGGTAACTGATGGTT GTTGAGTGTTGCACTGTGACACAAACAGATAGACACAAAGTTTCTAAGTTGAAAGATAGAGTGAACTTTAATAAGTTGAAGACCCAGACAAAGTTTCTAG TTTCTAGAATTTGGGAATTTCAAAACTCTTTATGTTGTTTTCTTTTTTCAAGTACTCTTTGACAGGATTTTCCTTGAGAAATTTGTTGTGGAATCTATAC CACCAAACAATATTGGGATAATAGAGTATATCCTCAAATTGTTGGCTAAAATTTCTATTTTACAAATTGCATGGCTAGTCAGCAAATTCAAATGGAGCTA AGTGTGCATTGAATGCATCTTATGGCTTCTATTAGGTGCACCATTTCTGCCAATTAATGGTAGTTTGCAGATTCTATGATGCACCTTTTTGTGTTTAGTA TATCATGCTCCCCCGC
• Tissue: flowers
• Gene name: LI_gene_30796;
• Additional information: details;

Expression of Ll_transcript_223790

FPKM

• FPAB: 1.5
• FPNAB: 0.6
• LF1: 0.7
• LF2: 0.7
• LF3: 0.9
• LF4: 0.8
• UF1: 0.1
• UF2: 0.1
• UF3: 0.8
• UF4: 0.6

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_223790

• Blastp: Protein SUPPRESSOR OF GENE SILENCING 3 from Lycopersicon with 52.49% of identity
• Blastx: Protein SUPPRESSOR OF GENE SILENCING 3 from Lycopersicon with 51.61% of identity
• Eggnog: Protein SUPPRESSOR OF GENE SILENCING(ENOG4111E45)
• Kegg: Link to kegg annotations (100134882)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019458108.1)
• Pfam: XS zinc finger domain (PF03470.13)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;