| Id Trinity | FTRINITY_DN53103_c1_g1_i7 |
|---|---|
| Name Transcript | Ll_transcript_223798 |
| Sequence | CTTCTCTCGCTTTACGCTCTCCTACTGTGGTGGCGCGTGCTTCACAACCTTACCTGATTCCGCCATCTTCTACCGGCGATCATCCTAAGTTCACCGTCAG ATCACATACAAATGGGTTCAAAAAGAGGTGGGGGAAGGCCTTTCGTTGTTGCTAACAATGCTGACTCGTCGTCCAAAGGGAAAAGCATATCTGAATCTCG TCCAATGATTGAGCAGTTGACCCAGGGTATTGCTGCCACCAACCTAGACTCAGGAAAAGATGATAGTGGTGAGTGGGAGGTATATGCAAGGAAATCCAAG AACAAAGGTGGAAGCAGTTCTTCAAAACCACGGGGTCCTCCACCCCATAATCCTAATCCTAGAGCATTAGGGAATAAAGACGTGTCTCAAATGCCAGGCA TTTGGAATCAAGGTGGAGTTGGGAGAGCTTCTGGAAATCCCTGGCAGACACAAAATGCTTGGAGACCAGCTGGCCGAGGAAATGGAAGACCCCAGTTCGG TACAAGTGGGTATGAAAACAACATTGTGGCTTCAACTCCTTTAATCCGGCCTCCTCTGGAGCACGGTTGGAGTTGGCAATCTAGAGCTGGTTCTATGCAA TCCAATCCACAAGAAGAAATTGTGCCAGAGTACTCTGAGAAGAACAACAATGTTGATGATGACAATGATGAGGTGGAAGACTCTTATGATTTGGAAGATA CTGATGACGATCTGATGAGTGATGACTATGATTCAGATACTAGTCAAAAGAGTCATGAGACAAGGAAAAAATGCAAATGGTTTCGGAAATTCTTTCAGAA TTTGGATGACCTGACTGTTGATGAAATGAATAACCCAGAAAGGCAGTGGCACTGTCCAGCTTGTCAAGGTGGCCCTGGTGCTATTGACTGGTACAGAGGA CTGCAGCCTCTGATGGCACATGCAAAAACAAAGGGGTCTAAAAGGGTGAAGATGCACAGGGAGCTCGCTGAACTTTTGGATGAGGAACTTCGCAGAAGGG GTACTTCAGTTATTCCAGCCGGCGAAGTATTTGGTAAATGGAAAGGTTTGAAGGTTGAGGAGAAAGATCATGAAATAGTTTGGCCTCCGATGGTTGTCGT TCAAAATACTCAGCTTGAACAAGATCATAATGACAAGTGGATAGGCATGGGTAATCAAGAACTTCTGGATTATTTCAGCACATACACTGCTGTCAGAGCA CGACACTCTTATGGCCCACAGGGTCATCGTGGGATGAGTGTTTTGATATTTGAAGCCTCGGGTAGTGGTTATCTAGAGGCAGAGCGTCTGCACAAACATT TTTCGGAGCAAGGAACTGATAGAAATGCTTGGTTTAGTAATCGACGTATTTTATTTCTCCCTGGTGGGAACCGGCAGCTCTTTGGATACATGGCTACTAA AGAAGACCTGGAGAGTTTCAACAGGCATTCCCAAGGTAAGTCCAGACTCAAATACGATATGAGATCATATCAGGAGATGGTTGTTAACCATATCCGACAA ATGAGTGAGGAAAACCAACAACTTATCTACCTTAAGGACAAGGTTGCCAAAGGACAAAAACATACTAAAGCTCTTGAAGAATCTTTCGGTATTGTGACTG AGAAGCTGCGTAAAACAATGGAAGAAAATCGCATTGTGAGGCTAAGAGCTAAAATGCAGCACGAAGAGAACAAAGAAGAGATGTACATGCAAGAGCAATT CTTTAGGGACCAGATCAAAGTCATTCATGATTCAAGGAATGCTAAGGAGGAAGATTTTGAGAGGATGCAGCAGGAGGAACGCGAGAAGGTGAAGCAGTCA AGCAATGGTCCTTTAAATGCAGAGGAAAGGAAACTCAAGGCTGATGAATATCTAAAATTTGTGGAGGTCCAAGACAAAGAGATGGAGAACTTTGTTGCTG AGAAGGAGAAACTGTGTCATGCTCATGAGGAAAGTCTTGCTGCAATGAGGAAGAGGCATTGGGAGGAAGAGGTGCAGATGGAGACAAAGTTCAATGAGGA ACTAGCCAAACTCATGGAAAAGTACTCCCCATCTCACTTGGAGATTAAGTCCAATGGTAACTGATGGTTGTTGAGTGTTGCACTGTGACACAAACAGATA GACACAAAGTTTCTAAGTTGAAAGATAGAGTGAACTTTAATAAGTTGAAGACCCAGACAAAGTTTCTAGTTTCTAGAATTTGGGAATTTCAAAACTCTTT ATGTTGTTTTCTTTTTTCAAGTACTCTTTGACAGGATTTTCCTTGAGAAATTTGTTGTGGAATCTATACCACCAAACAATATTGGGATAATAGAGTATAT CCTCAAATTGTTGGCTAAAATTTCTATTTTACAAATTGCATGGCTAGTCAGCAAATTCAAATGGAGCTAAGTGTGCATTGAATGCATCTTATGGCTTCTA TTAGGTGCACCATTTCTGCCAATTAATGGTAGTTTGCAGATTCTATGATGCACCTTTTTGTGTTTAGTATATCATGCTCCCCCGC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_30796; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_223798
| Blastp | Protein SUPPRESSOR OF GENE SILENCING 3 from Lycopersicon with 52.74% of identity |
|---|---|
| Blastx | Protein SUPPRESSOR OF GENE SILENCING 3 from Lycopersicon with 53.35% of identity |
| Eggnog | Protein SUPPRESSOR OF GENE SILENCING(ENOG4111E45) |
| Kegg | Link to kegg annotations (100134882) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019429760.1) |
| Pfam | XS zinc finger domain (PF03470.13) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |