| Id Trinity | FTRINITY_DN53107_c9_g1_i13 |
|---|---|
| Name Transcript | Ll_transcript_223554 |
| Sequence | CCATCGCTTTTTCTAAAAGAGAGAGGATGATGGTTGCCACAATGTTGTTGTGACAATTGTGAATGAAGAAAGTGCAACGAGTGTGGAAAATGACAATGGT GAGTAAAAGATGATCAAAATATGAAAATATCTGATAAATAGCGACAAAAATATAAATAATAGATATTGAAATGTCAAGTAAGAAAAGCGAGAGAGTTATC GATTCTCCCCAATTCCCTCGCACTACTCAAATGTCTTCCCCTACCTCTCCCGTCGCCGATCCTCTTCGCTCCGTCTTCCTCGGCGTCGACGTCGGCACCG GCAGCGCTCGTGCTGGTTTGTTCGATGAGGGTGGAAAACTTCTTGGTTCATCAAGTAGTCCAATACAGATATGGAAAAACGGTGACTGTGTTGAGCAATC CTCTACAGATATATGGCTCGCAGTTTGTGCAGCTGTAAAAGCAGCCTGCTCTCAGGCAAAAGTTGCACCTATAGAAGTTAAGGGTCTGGGATTTGCAGCG ACTTGCTCTCTTGTCGCGGTGGATGCTGACAGCTCACCTGTTTCGGTTTCTTGGAGTGGTGATTCAAGAAGAAATGTGATAGTATGGATGGATCATAGAG CTGTTGAACAAGCTGAAAGGATCAATTCCTTTAACTCACCTGTACTACAGTACTGTGGTGGAGCTCTTTCACCCGAAATGCAACCACCAAAGGTACCATC TGAACTAGTGCCATTATTTCACCAATGGTCATTGTACATAGTATGTTGTCTACTAAATTTCACTTTAGGCATTCTCCTCCTTATATCCAGTTGTTGTAAA AAATTCAAGTGCAGTGTAATTTTAGATTATTGTGGCTGCCTGTACAACTGTTGATTCAGTGATCAGTGATAATGTCAAATACCACATCTGCAATTTGGAT AAGCCCTTTCCATCTGTCTTGGATTAAGCTTATAAATCATGGTTAATCTGAGTAGATGACCAACTAGATACACTTGATAGGATTTGTAGGAATAATGTAT GAACAGATCATTCTTTCATGAAAAAAGGTATTTCACCCTTTCACTTTTTGTTACCTTTATCTTCTTGTTTTGTATTACTAGTGCTCTTATTTGGTTTAGT GTGGTTGAGTATACTTGACTTCCAGAAAATTATATTACCGAGGATTAACATCTTGAAGATACTAAAACTGTAAAATTGCTGACTTTTACTGATGGAATCT AACTTCTCAGCTTCTCTGGGTTAAAGAAAATTTGCAAGAATCCTGGGCTATGGTTTTCAGATGGATGGACTTGAGTGATTGGTTGTCATACAGGGCAACT GGAGATGATACTCGCAGTCTGTGCACCACAGTTTGTAAATGGACATATCTTGGTCATGCACACATGCAGCATATCAATGATCAAAACTCCCGAGATATGG AAGCTTGTGGGTGGGATGATGAATTTTGGGAGGAAATTGGTTTGGGTGATCTCATTGAAGGACATCATGCTAAGATAGGTATTTCATTTGACTGACATCG GCCTACCCACTTTCACTAGTGATAAGCTCTGAGACTGTCTAATGTGGACTTAATGCAAATTCCATATTTTATGATAGTTTGAGTCTTGAGTTTTGACTGT TGCATAAATGCAAAATTCCTGTTTTAGTAGACGACTTGTTTTCCAACTGAAGTGGAAATGGGGTAAATGCTATATGCTATCGGTTTTCCCTATTTGTTAA TATATTTTCTCTGCTTACAAGATTTAAGTATGAGATGGGAATTATGTGTGCAATTATCGATCTATTTGACCAGGACTATTTCAAGTTTTTATTACTTGTC TAGCAAATTTTAAAGTAAGGAAATAATCTCATGGAACATTTTGGTGCAAGTGGAAACTGTTTTAGTCCACCTTAGCTTTTATATTGAACTTAATTATTTT TCTCCCTTTGGAAGTTCAATATGAAAAGCAGTATTATTGTGCAGTATGCTTAGTTATGATTTAAGTTTGAAAGTTGTAATTGTTGTTTTATTAAACAATT CTTGTTTTTTCGTGTGTGATCCAAAGAATAATGGGGGTAAGCTTTGAGTAAGCTTAGGTTTAATTATCTATTTTTTGTGCTATTCAATCTATTTCTACCT TTTGATTTCTCAACAAGATAATGGTGCTTAATAACAGGACGAAGTGTTGCTTTCCCTGGCCATCCTCTGGGCTCTGGCCTTACTCCCACTGCTGCAAAGG CAAGAAATTCTGTATGGAAGATTTTGCATTCCTTTGTTGTTTGAACCAGTGCTTCCTTAAGCTTCATTATCAAAGCAAACATATATTGCTTAGTGGGAAG AATATCAGTACTATCTTCCTCCTTCTGTGGGGATTGGTTCGATTTGATGTGACAAACTCCTGTGATGAGCTGCTTTTTAAAACTTCTTATGGGTTGAAAT TTTCAGGAACTGGGTCTTGTACCGGGAATTCCTGTTGGGACATCACTAATTGATGCTCATGCTGGTGGGGTGGGGGTCATTGAAAGCGTGCCACCATCAG AAGCTGAAGAACATGACAAGGAAGCGATTTCCAACCGCATGGTGTTAGTTTGTGGAACTTCCACGTGCCATATGGGTGTATCACGGAGCAAATTATTTAT CCCTGGGGTTTGGGGTCCATACTGGTCAGCAATGGTACCAGAATATTGGCTGACTGAAGGTGGGCAGAGTGCTACTGGTGCATTATTGGATCATATAATT GAAAGCCATGCTGCTTCTCCACTACTTGCTAATCGAGCTGCTTCTCAAAAGATTTCAGTGTTTGAGTTTCTGAACAAGCTCCTGGAAACAATGATGATTG AGCAAAAGCAATCCTTTGTTGCTGCCTTGACTGAAGATTTACATGTTCTTCCTGACCACCATGGGAACAGGTCTCCCATTGCAGATCCAAAATCAAAAGG AGTTATCTATGGTTTGACACTTGACACAAGTGAGAAACAGTTGGCTCTTCTATACCTAGCAGCTGTGCAGGGCATTGCGTATGGCACCCGTCACATTGTA GAGCATTGCAATGCCCATGGCCACAAAATCAACACTCTTCTTGCATGTGGTGGCCTATCAAAGAACCCTATCTACATTCAGGAACATGCTGATATTATTG GTTGCCCTATTATTCTTCCAAGGGAGAGTGAATCTGTGCTCTTGGGTGCTGCTATCCTGGGTGCTGTTGCTTCAAGGAAATATCGGAGCCTTAGTGAGGC GATGAAATCCCTTAATGCTGCTGGTCAGGTCATTCATCCATCTGAAGATCCAAAGGTTAAAAAGTACCATGATGCCAAATACAAGATCTTCCGTGACCTT TATACACAACAGCTCGAGTTTCGTTCCATGATGGCACAAGCCTTGGCATAGCTTTGCAAATTGCCGGGACTCAAAACTGAACATTACTAGTTTGATCATT ATCTGTTTCAAAAATGGTCATACTTTTTGGTAGCAGGTTAGGCATTGAAGAACTCAAAGATACAAGAAAAGACAAGTTACATGTACAGGCTCATTGGCTA CTTACTCTTTTCCTTAAACAAAACCTGCGTGGAGCTTGATGTTGTACGTGATAATTTAGACTTTCAACAATGGAGAATATAATTATATGATATTCTTGTT CCAAGTGGTGCCACATGATGTGATAGGACTTCCTTAAATCTGGACCAGTTGAAAGGCATATTTAAATGTAGTGGACCTCTGTAAAGTTTCAACCACTGGT TATTCCCAACCCTTTTATTCTTGTGAGTTTTTAAGGATACACTTTCAAATCATCGACCTCCACCTCCTATTTGTCTTAGATGCGTTTCTGCTTGAGAAGA AGCAGCATATGCTTGTTTCAACCACCCTCAGTTTTCAGAAAAGGTGAGGGGGAAAATACTAAGCTTGGTTACAAAAGTTGTTGATAGCTTAACTGCCCAT ACCCCATAGCTGGCATAGGAAGACATTCTTCTATTATTTTAGGTTTTGGGGTTTGTAACATGTATCAGCTATACCAAAGAATGTCCCAATTTCTTGTGTC TGCTAATTAAAAATTGACACATAACTTAATAGATTTTTTTTAAAAACAAAATACTGTATTTTTGTATTACTTGTTTAATGTTAATTGGATCGGGC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_30848; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_223554
| Blastp | FGGY carbohydrate kinase domain-containing protein from Mus with 50.57% of identity |
|---|---|
| Blastx | FGGY carbohydrate kinase domain-containing protein from Xenopus with 49.68% of identity |
| Eggnog | ribulokinase(COG1069) |
| Kegg | Link to kegg annotations (75578) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019463457.1) |
| Pfam | FGGY family of carbohydrate kinases, C-terminal domain (PF02782.15) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |