| Id Trinity | FTRINITY_DN53115_c2_g2_i5 |
|---|---|
| Name Transcript | Ll_transcript_222238 |
| Sequence | AAACTCTGTTGTTACAAAAAAGGGAAAGGAAAAAGAAAAAACATCACCCAAAATGATATCTTAACCAGTGACTAACCATGGTTGAAAATAGAAACCCCCG AATTTGTGCGTGTGGGTGTCACTGTTAGTGCTTTCTGCATTGGTTCTCTGCAAAACTCTGCAAATCTTTCGCCGCCTTCTTCGTCCATTTCGGTCCTTCC CCACTTCTCTCAAATTTTGGGTCTTTTTACCTTTCTCCAAAGTTCCTTTTTTTCATACTAACTTCCACTGTTTTGTTGCAAATCATCATTCCCACTCAAA CACTGTTATAGCATTTTAATTAGCGAAAACTTTGTCGGTCAAAGCAACCCAACTCAGGTTTTCTCGAAATTTTGTACCTTTTTGAATGCCCAGTTAAGGA AATTACCATCTTTGAGTAAAAATTGGAGTTACACGAGCTTTCCCTTGATCTCAGCCAAAAATCAGTGTCACTATTGTCGATGGATATTCAACTTGTTGTG TGTGTATGTGCCGACTTAAATCTTATGCTGGTCAGAAAATAATATATAAATATAAAAATAAGATCTAATCTTCAACCACCTTTACTTTATTACTTGTTTT ATTTGGATTCCAAAGGGGTTTCCCAATAACAGGGGTATGCTGGTGGAAGTAACAGTAAGGAGCTAAAAAGTGCACAAGTTTGAAGAGTTTTGGAGATTTT TTGTTCCATTAATTGGTTGATTCATCAACCATCATGCCTCTTTATGAGTTATACCGGCTTTCTAGAGAGAAGCTTGATAAAGAGGTTAGCAACACATGTG CAGCTGAACAATCTCAATCTTCCTTGCCTGAGAATGATTTCTTTGAGCTGGTTTGGGAAAATGGTCAGATTTCAACACAGGGTCAGTCCAGAAAGAGCCC TTCTTCTGGCAAGAGTTTGCCATCTCACTGTGTACCGTCTCATAGTCCGAAAGGCCGAGATAAAGATGAAGGAGGATATGCTATGAATACAAGGATGGGA AAGTTTGTGGATTTTGATTCTGGATTGAATGAAATCTCAATGCCAGTCCCATCACATGAAGTGGATTTGAGTCAAGATGGAGATATGATGCATTGGTTGG ATTACACAATGGATGGATCTTTGCAAAATGACTATAGTTCTGATTTCTTACATGAACTATCCGGTGTCACAGAAAATGACCTCCCGAAATCAAATAATTT TGCCCTTGTGGATAGAAGAAGCAATGGTACTAATCAGGTATTTAGGGACTCTCGTAAAAGTTCTGCAAGTTATGTTCCTGGTTTAGAACAAGGGAATGTT TGTAAAGGTTCTTCAACCGAAGAAGTTGACACTTCTGGGCCTAAAGCTAGTATCAATCAGCTATACCCGCCATCATCACATCAATGTCAAACACCATTTG CATCTGTTAGATCCAAAGTATCAGATATAACTGAGAATAATATTAATAATGCTACTCAAAATGCACCTCATCATGGCGAAATAACTCAGATTGCCTCTTC CTCTAGTGATTTTTGTAGCTTAAAGATGCAGAAGCAGGAAACAGCTATTCCTAATAATGGTTCCACCGTAATGAATTTCTCCCATTTTGCAAGGCCTGCT GGTATTATGAGAACTAATCTTCAGAATGTTGGCTTCAAGTCTGATTTATCTTCAGGAAAATCAGACAGTCGGGGAAATAAGAATAAAGGTGTAGCTACAA CTAGCAGCTACCGTTCTGAATCAATAAGAGTTGATTCAAGTGGTGATTGTTCAAAGGAACCAACCATGCACTGCCAGCAGGTTGTGGAACAATCTAAGGC TGATTTGAAACAGTTGGAGCCAAAATCTCTTGAACAGGAGGCTGCCGTAGTTTCTAAACAGTTGGACCCAGTTTGCAAAGAGAGTTCTATTAAGGTTGAC AAAACTTCCATTCAAATTCTTGCTGAAACTGGCTCTAAAAAACAAACTGCTTTTGAAAAAAGTATGGAGCCAGCAGTAGCCTCCTCCTCCGTTTGTTCTG GCAATGGTGCAGACAGAGTTTCAGATGAGCCAAATCAAAATTTGAAGCGGAAGAGTAGAGACACTGAGGGCTCTGAGAGCCATAGTGAAGATGCTGAGGA AGAATCTGTGGGTCTTAAAAAGGCGGCTGCTGGACGAGGAGGTACAGGTATTAAGAGAAGCCGTGCAGCTGAAGTGCATAATCTTTCCGAAAGGAGGCGA AGAGACAGGATCAATGAGAAGATGCGTGCATTACAAGAACTCATACCAAATTGCAACAAGGTTGATAAAGCTTCAATGCTGGATGAGGCAATTGAGTATC TTAAAACACTTCAGCTCCAAGTTCAAATGATGTCAATGGGAGCTGGTTTATATATGCATCCAATGATGATACCTGCGGGAATGCAGCACATGCATGCACC ACATATGGCTCCATTTTCACCTATGGGTGTTGGCATGCAAATGGGGATGGGTATGGGTTATGGGATGGGTATGCCTGACATGAATGGTGGTTCTTCTAGA TTCCCAATGATTCACATGCCCCAAATGCAAGGAAATCATTTACCTGTTGCACATGTGTCTGGACTCAACGCTTTACATGGGATGGCAAGATCAAATCCTC AAGGGTTTGGGCTTCCAGTTCAGGGTCAGGGACTTCCCATGCCGATACCACGTACTCCTGTTTTTCCTTTTTCAGTAGGGCCTTTTATGAACTCATCCAC TTCGGTACAACATGCCGGTGGAACAGTAGCAGGACTTGCTGAAACTGGGAACTCAGCTTCTTGCTTGAAAGACCCAATGCCAAATGTGGACCAACAAGTT AAGCAAAGTAATGACTCAACAAGTCAGATGATGCTTCAACCTAACCAGTGTGAAGCAGCAACCGTTGGATTTGAACAGTCAGCTTTGGTGCAAAATAGTG ACCATGCCTCTGATATTAATGACAGTGGAGCTGTTAATGCAAAGAACATAGCCTCATGATTGGTTATGATTGATATTCGGCATTGACTGTGGCTAGTAGA AGAATCCATTTTTCTGAAAAGTGAGTTCAAAATCTCTTGTTTCTCATTTTGCAAGCTGAATGTAGATTATCAGAGGATATTTCAGATTATGTCGACTTGT CACAACAAACATTAGAATCTTAAATTCCAGACTTACAATACTACACAAATTTTGGTATCTTGGGAGACATCACTCATTTGTATATCCACTTAGCTAGCTG TTCAATCAACTGTCATAAATTTTTTATATACTACATATATGTATTCAAATGTTTGATTCAGATCTTTCATAGTGATTCTTTCGATTAATGCAATAATAGT TGTTTCTTTGCAATCTAGTTTCCTCTCAATGTCGTGACAAATACTTGAACACTAAGATGCAGATGAATGTTGAAGTATGATGTCAAACTTCTGCAGGTTG TGTTTCTGGCATACTTTAGCAGCATGTAATAATTTCTTTGATCATATGTTCTGTGTGGATTGGTTGGATTTGTACATTGGCAACTACACCATTTACTATC ATCATCATCAACTAATTTTGTTGGTCTTGATACATTTGAATCCACAAAATCAATAGGAACTACGAAATCATATTAGTTCCGAGGCAAGTTCTCTCCTCGC GTTGTGTGTATTCATGTCTTTATTTCACCTATTTGGCCATCTGGG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_30902; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_222238
| Blastp | Transcription factor PIF3 from Arabidopsis with 34.41% of identity |
|---|---|
| Blastx | Transcription factor PIF3 from Arabidopsis with 58.75% of identity |
| Eggnog | Transcription factor(ENOG4111SYS) |
| Kegg | Link to kegg annotations (AT1G09530) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019441239.1) |
| Pfam | Helix-loop-helix DNA-binding domain (PF00010.25) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |