| Id Trinity | FTRINITY_DN53139_c0_g1_i5 |
|---|---|
| Name Transcript | Ll_transcript_222192 |
| Sequence | CCTGTAAATAAGAAAAATACATACAAGTCCGAAGCAGCGACTTGGTCGTTCAGTTTGGCAGAAAAGTTTTTGATTGTTACAATCCAATATCTTCACACAA ACATCAACGCTCTCTTCGTTTCTACGATGTTTTTCAGAGGAAAGTATGGTGATGGTGGTGATGGGCGTGAAATGGCTCCAAAACGTCAGCGGACGATTGA TCAAGGATCTTCATTCTATGGTTCCCCTGGTTCCAGTTTTATGTACAACTCACCTCCATATGGATATGTCAGCCAACCTCCTCCTCCTCCACCTTTCCCT GTTGTACGACTGCGTGGCCTTCCTTTTGATTGTACTGAAATTGATGTGGCTGAGTTTTTCCATGGTCTGGACATAGTTGATGTTCTTTTTGTTCACAAAG GTGGCAAGTTCTCCGGGGAAGCTTTCTGTGTTCTAGGGTATCCTCTTCAAGTTGACTATGCTCTTCAAAGAAACCGGCACAACATAGGTAGAAGATATGT TGAGGTTTTCAGAAGCAAGAGGCAGGAATATTACAAGGCAATTGCAAATGAGGTTTCAGAAGCAAGAGGTGGTTCACCACGTCATAGTGCTTCCCGTGCA AAATCATATGATGAAGGAAAAGATTCAGCTGAACATACAGGGGTGCTGAGACTGAGGGGACTGCCATTTTCTGCTACTAAGGATGACATAATGGACTTCT TCAATGATTTTGTGCTGTCAGAGGATTCTATTCATATCATAATGAATTTGGAGGGCCGACCTTCTGGGGAGGCTTATGTGGAATTTGAAAATGCTGAAGA ATCAAAAGCAGCAATGACAAAGGATAGGATGACACTCGGTAGCCGCTACATAGAGTTGTTTCCTTCATCGCACAGCGAGATGGAAGATGCAATTTCAAGA GGACGCTGATTCCTTGGTGGGCTCTCTCATTTGCTCTTTTGTAGTTATAATTACTAGCTTCATCGTATGATCAAAGTTTTGCTCAAGAGACATTTGGTCG CTGTATTTGTTTTAGCTCCAACATGCTTTTTAATATGCAGATAAAAGGAAGTATAAGAATTTGCCTAGATTCAATATTGTGGACCTATTTTGGATCACCC AGCATTGAAGTTTTTGCAATGACAGGTATGAGAATATTAGGATGAAATCATCCTTCATCTTGTTATCTTTGCCTTAAGTGTGCATTGAGATGTATGGGCA TGGGAATATTTGTTGATTAGGCAAATGATGTTACTTTAGTGCTCTGTGAATCAAATTTTCATGCATTCTAGTTAGTTTATTGAGTGGATAGCCAAAACCA TCCTTTTTATGTGATCTATCATGCTTGTGTCAAGTTTTATTTATTGGTGGATTTGGTATGCCTTTTCAAACCTTGGAATGATGTGATCAAGGACTATTGT CAAATGTGATTTTATTTGCAGAAAGAGCAGATTCATAAAGCTGTATTCTGAATCAAAAAAATGGTGAACACTAGTAATGCATCTTATCTCTTATGTTGTT TCTAAGAAAATTTGTTGCTAAAAGGTATTGTGATGATTTTGTTTTATTAAGGTTGGTTCAGAGATGATTGTGTTAAAAGAAAGGGCCAAAGGAATGGTCA ATTATTGTTAGGATCAAAACATCAATTAACAACTGGTATCTTTAATCACGTGGAGTTTAGATCATTCATCTATGCATAACATGATTATTCATTCAAATGA CATATCTTATTATTATTGTAATGTTATAGGTTGGTCTTCTAGCTAGTGTCTCTAAGAAAAAAATCTATGAAAAAATAATAATGTCAAAATGTTTTGATCA GTACAAACTGATTTTATCATAATTGAAATTCCTTGGCACTTCACAGTCATCTTTACCCTATTTTCTTTAAGCTATGTTTGATGTTTGCATGTGAAGGAAT GAAATGCTACAAAGTTTCTGTACCATTGCTTCAATATTATTATTTCATGATGAATGGTGTAGGATAAGATAAAATATATTGTTCCTCTCACAGACGTACC TATCAAATTGGGAGAGAAAAGATAGAGATAGATATTGAAGAGTAATGCTATATCCTCC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_31030; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_222192
| Blastp | Heterogeneous nuclear ribonucleoprotein F from Macaca with 37.19% of identity |
|---|---|
| Blastx | Heterogeneous nuclear ribonucleoprotein F from Macaca with 35.08% of identity |
| Eggnog | - |
| Kegg | Link to kegg annotations (101867097) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019449884.1) |
| Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (PF00076.21) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |