Ll_transcript_222079

• Id Trinity: FTRINITY_DN53146_c2_g5_i1
• Name Transcript: Ll_transcript_222079
• Sequence: CCAATACTCATCGCACTTTCTTCTTCCCTAACCTTCAATCATTCTTCTTCTTCTTCTTCTTCCCTAATCTGTAATCATCAGAATCTTCAATCCATCGTTG ATCATAACACCATGTCGTCTATGTTGCATAGAAGTTTCAAGCCCGTTAAGTGTAAAACTGCTTTGAAGCTTGCGGTATCACGCATGAAGATATTTAAGAA TAAGAAAGAAGGCGAAGTGAGGAAGCTCAGGAAGGAATTGGCTCAACTTCTTCAATCTGGCCAGGAATTAACTGCTAGAATAAGGGTTGAACATGTTATC AGGGAAGAGAAGCTAATGGCTGCATATGATCTTGTTGAGATATATTGTGAACTTATAGTAGCACGCTTACCGATAATTGAATCACAGAAAAACTGCCCCA TTGATTTGAAGGAAGCAATTTCAAGTGTGATATTTGCATCCCCAAGATTGTCAGACATACCTGAGCTCGTGGATGTGCGGAAGCAAATTACATCTAAGTA TGGAAAAGAATTTGTCTCGGCTGCTATTGAATTACGTCCTGACTGTGGTGTAAATCGCTTGTTGGTTGAGAAATTGTCTGCCAAAGCACCCGATGGTCCA ACCAAGATGAAAATACTGACTGCTGTTGCTGAGGAGAATAATATCAAATGGGAACCCAATCCATTTGGTGAAAATGATGGAAAGTCTTCTGAAGACTTAT TGGTTGGACCAAATAATTTTGAGAATGCTTCTTATGTGGAACCTTCTCAAGTCCATGTTTTACCTGTTCATGATGAAAAGGCCCCTCCCAACTTACGCGT TTCCTCACAAACTAAACCAACGCATGATACATCTACAAATTCATATGAATATAATGCAAGTGGTGCTGCTAGAAAGGTGGGTGGCAATCAGTCAACATCA GAGATGTCTAGTCCACAAATTAGACCTTCAGGAACTGGAAGTCAAGAAAAAGATTTTCGAGATTCAAATTCTGAAAACAGGAGTGCCTTTTCTATGGGTA AGCAAAATTGGAACATGGAATTCAAAGATGCTGCCTCTGCTGCACAGGCTGCTGCAGAATCTGCAGAACATGCTAGCATGGCTGCTAGAGCAGCTGCTGA ACTTTCAAACCGTGAATACATGACAAGGCAGTATTCAAGTGGATCACATAGTTCCCATGTCAGCAAGTTTGGAGAAGCACCTCAAGAATATGATTTTCAT GGCGACAAACATATTTCTACAGGTTCTGTTAACAACAACACCTTTCAAAGAAGGGATTCTGGGGCACGCAATGAACAGATTACTGCAAGAGAACATGATA ATCCAGTAGGAGCTCCCAGTGAACATTACAGGACTAGTCATGAGAACACGGTGAAACTTGCTCCATCAGCTTCATTGTCATCTAGTGGTGACAAACATAT TTCTACAGGCTCTGTTAACAACACCTTTCATAGAAGGGATTCTGGGGCACACAATGAACAGATTACTGCAAGAGAACAAGATAATCCAGTAGGAGCGCCC AGTGAATATTACAGGACTAGTCATGAGAACATGGTGAAACGTGCTCCATCAGCTTCATTGTCATCTAGTGGTGACGAACATATTTCTACAGGCTATGTTA ACAACAACAGCTTTCATAGAAGGGATTCTGGGGCACGTAATGAACATATTACTGCAAGAGAACAAGATGATCCAGTAGGAGCGCCCAGTGAATATTACAG GACTAATCATGAGAACACGGTGAAACGTGCTCCATCAGCTTCATTGTCATCTAGTGGTTCTTTTGGTGATAACCCATTTGCCCATGGTTCTCAAATGGCT GATACATATCAGCATAATGACTCATTTGAGCAAGAGAATAGTGACTTACATAAAATGGATATAAAGAAGGAGGCAAGCAGCACTGGGGTAAATTTTATGA CTGGGCTACACAGTGATGATGATTTGAATACTGAAAATAGTTATCACATTAGAGATGCAACACCGTTTACACAATCCAGAAAAGCTTCCTCTTCTCACCT CATTTCTACAAGTTATGATCATAATCAGAATTTGAACTCATATGACCAGGAGATGGGGAACAAGGCTGTGGAAGACATTTTTGATACCATTGAAAGAAAC ACTCAGACAATCACTATGGAAGCAAATTCTTATAATGATACATCCGTAGCGTTTGATGATTCTGGATCAGAGGATGATAATTATAAATTTGATTTTGAGA ACAAATACAAGGGAGAGAGATCTAGTTTGTTCTTCTCATCTCCTGGAAGCAAATCACAAGTTGATCCATTAGAAAATACAAGTTCTTGGAGACATCGACA ATACATTGATGAGAGGGAGTCAAGTTCTATTGCACAGTCACATTCTTCTGTTGTTTCTGAAAAATTGACAATATCTGCAATTTCTTCAGAGAAAGAAGAT TTGGAGCCTGTCAATTTTGATGATTCAGAAGATGCGGTTTCAGATAGTGAGCTTAATTTGGTCAACTCTTTGGTTTCTGGGACTTCTGATTATAGAATTT CTGCCATTGATCAGAGTGAAAACCATGAGGCTTTAGAGTCCTCAGCAAGAAATGCTAAAAATGTGGGCTCTGACAGAAAGACTTGGGTATCACCATCTTC AGTTGGGTCTGATTCTGTGGAAGAACAATTTGAGAAAAAGGTAGAGATTAATACTATGTCGGATAAGACTTTTGGTTTTGGTGAATTACGAATTAAACAG TCATCACAACTGCCTGATACTATCAAATATACGGAAACTTTGGAGGAGTCCCATACAGAAAATGATATGGGGTTAAACTATGGAATGTTGAAGGGTGGTT TCCGCAATAAAGCTCATAAGAGACCACCTTATATTAAGAATACATCAAATGAGAATTCATCTTCATTGAGTGACATTTCAGTCCAAAATGAAAGCTCTTT TCCTACTGTAAGGACTTCAATCAGCTCTGATGCTCCTGTTCAGGACAAATACATGAGGGAAGTAAGTACAGGAAATAGAAGTGTGGGCTTGAGAAACACA CCTTCTGATTTTGATAGTCATGATGCTGTTTCAAACTCACAAGTGAAACCGACTAGTACTCATGACCCTCGCATGCAGAAAGAGCAGAGTGAAGCCAAAA AGAAATCAAGCTCAAGGGCCTCAAGTACATACTTCGATTCTGATATTAATAATTCTGAGGATGAAACTCCTAAACTAAGTTCAGCGAGTCTCACTCATCC TGTTAGTGGAATGTCTCGAAGGAAGTCAACTCCTTCAAAATCCGGTACAGGTTTAAATTTGGACAATGCTCCTTCATACAAGGCTTCTGTGACTTCTGGT ACAAGACTTGGATGGAACTCTTCAAGGGTTTCTCATGAGAGTGATAATCAAAAGGCCTCATACATGATGAAAAGCTCTGAAAATTTGGGAAGTACTCAGC CTGGATCAGCTGAACATGCAGCATCTATACCAATTTCAGAGCCCAATAGGTCCCCTCATGAGAAAATTATAAAATCATCGGCAAGGGTGCAACCATCCAG TTCTTTTCCTAAAGCAGCAATACCGGATAGCGAAGAGGGCAAAGAGGCTTCAAAATCTTTAAGTTCTGATGGAGATACTACTCCTTCAAAGCAGAAGGTT GCTCATGTTCATCCAAAGCTACCTGACTGTGATTTCATCACTGCCCACTTCCTGTCTCTGAAGAAGGATCGTCAATAAATTGCATTTGATTGCATATTAT CAACTTAGCTACTCATACTTGGTCTTATTTTTTATCACTTTTTCACAGCTTCTATAGTTACATACAAGTGCTACATCTATTTTTCTTGTAAAAATTGAGT CAGTAAAGGTTTAACTATATCTTTTTTTTTGGTACAACTCTATTTCTTACTACTACAGATTGAGCAGGGTATGTTGAAAAGATTCTTGTAATCAAACTAA ATAATGTTCTACTAAGTTTGTGCTTGAAAATCAATATTGTGCAATGCTGTCCCTTTGGGCTTTTATATATTTCGATATGATTCTTTGTGTGTCTTAAAAA A
• Tissue: flowers
• Gene name: LI_gene_31086;
• Additional information: details;

Expression of Ll_transcript_222079

FPKM

• FPAB: 17
• FPNAB: 10.4
• LF1: 7.1
• LF2: 8.5
• LF3: 8
• LF4: 5.9
• UF1: 5.8
• UF2: 8
• UF3: 7.8
• UF4: 5.8

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_222079

• Blastp: IST1-like protein from Dictyostelium with 38.95% of identity
• Blastx: IST1-like protein from Dictyostelium with 38.42% of identity
• Eggnog: positive regulation of collateral sprouting(ENOG410YG52)
• Kegg: Link to kegg annotations (DDB_G0289029)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019447985.1)
• Pfam: Regulator of Vps4 activity in the MVB pathway (PF03398.13)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;