| Id Trinity | FTRINITY_DN53155_c4_g2_i5 |
|---|---|
| Name Transcript | Ll_transcript_222842 |
| Sequence | TTCAATTGCCAAATGTATGGTCGCCCAGATTCTAATTATCTCAAATATCGATGGAGACCTCTAAACTGTGAGCTCCCAAGGTACAAAGAAATAACACCAC TCCCCAAGAGTCTGTTCAGTTGTTAAAGCTGTGAAACTTTAATCCAGCATCTCTGAAGATAATGTTTGCAAGTTGAGTTTTGGAAGGGAATGAGAATAGA CTATTTTGCAAGTGTATTTCATAGCCCTTTGAGTCTTTCTCTTTCTTCCATTACTCTCTAAAAGCCAACTTGAAAAAAAAAATTAAGGTCTGTTTGTGAA CTGAGTTTTGGAGAGGAAGAAAGAGAAGATATCGAAAGTCATAAAATACACAAGTGAGATGACTCTGGAGTCTTTATTTTTCATTCATTCCGCTCCAAAA CTCAACCCAACTCGCAATCAGACCTTAAGTGCTGGTAGCATTAAAGGATGTCTTAGAGTAGAAATTTGTTGCGTGTGCTGAATGGTTTTGTAGCATGTTG TTGGTAGGTTCAATGGGGTTGAGTTTCTGCTTGGAATGAGAGGCAAAAGTGTGATGTTTGTTGGAGACTCTCTTGGGAGAAACCAATGGCAGTCATTGAT TTGTATGATATCTGCTGCAGCACCTCAGACACAAACCCAACTGGTCAGAGGAGAGCCACTCTCAACTTTCAGATTCTTGGATTACGGTGTGACCATATCA TTTTACAGAGCTCCTTATTTGGTAGAGATTGATGTGGTCCAAGGGAAGAGAATTCTGAGGCTGGAGGAGTTAGATGGGAATGGTGCTGCGTGGAGGAGTG CTGATGTGCTGTCATTTAACACTGGACATTGGTGGAGTCATCAAGGTTCTCTTCAAGGGTGGGATTACATAGAATTAGGAGGCAAATACTACCCAGACAT GGATCGTTTGGCAGCATTGGAAAGGGGTATGAAAACATGGGCTAATTGGGTGGACACCAATATTGATAAAAGCACGACCAAAGTGTTCTTCCTGGGAATT TCTCCCTCACATAACAACCCAAGTGAATGGAACACCGGAGTGACAACAGTAACGACAAAGAATTGCTATGGCGAAACTGAACCAATCACCAGTTCTGGAT ACACCGGTCCATATCCAGATCAGATGAGGGTTGTGGATACAGTGATTAGAGAAATGAACAACCATGTTTATCTTCTTGATATTACAATGTTATCAGCATT TAGGAAAGATGCTCATCCATCAATATATGATGGTGATTTGAGTCCAGAACAGAGAGCTAAACCTGACTACTCTGCTGATTGTAGCCATTGGTGTCTTCCT GGGTTACCAGATACTTGGAATCAACTATTTTATACGGCTTTATTCTACTAATTTTGAGTTTTACTTGCTATAGTTATTAACAAGTTCATTCACTAATTTT TGCCCCCTTATTTATATAACTCTTAGTGGGCAATGCATTTATTTGAGAGGGTTGCGTGATAGCAACTGTTTCATTGTAAAGATATGCTAAGCAAACAAGA AAAGGAGCTTTCTTTTTCTTTATTCTATTGTTGTTCTTTATTCTATTAATGTCAATAGTAAATTTTTGTATAAATTTCCAAGTAAAACTGAAAAAGTTAT GGCG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_31216; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_222842
| Blastp | Protein PMR5 from Arabidopsis with 61.54% of identity |
|---|---|
| Blastx | Protein PMR5 from Arabidopsis with 61.7% of identity |
| Eggnog | Pfam:DUF231(ENOG410YF78) |
| Kegg | Link to kegg annotations (AT5G58600) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019420088.1) |
| Pfam | GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p (PF13839.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |