| Id Trinity | FTRINITY_DN53173_c3_g1_i4 |
|---|---|
| Name Transcript | Ll_transcript_222304 |
| Sequence | CCTTTTGCTCACTCGCTTTTTTTAATCCATAAAAAAGCTACCAACTTTGATTTGTTTCTGGCTCGATAGATCAAAATTTGTCAAAATGACGAAATACAAC AAAAGTGGAATCGCAGGTTCCAGCGAACCCCAGTACGAGCAGAGTGAGATGGACAGCTCTTCTTCTAGTTCCTCAGAAGATGAGGAAGAGGAGATAGAGA AAGAGCTAGCTGATGTAACCTTTGAGGAGTTGCAGAAAGCACGCTCAAATGGGGCACATGCATTTTCCAAGAAACCTAGAGAAGACCAAAAGTTGAAAAG GGCCAACAAGAATAGGCCAATGGAGGCTAGCAGCAAGAAGCCAGTACCTGCCTTTAGAGAGGTCGTACAAGCTCCTAAGAAGGTTGTACGTGACCCACGC TTCGAATCTCTTTGTGGTACACTTGACACTGATGGGTTTAGGAAGAGATATAATTTTTTATTTGAAAGTGATCTTCCTGCTGAAAAAGAGACTCTTAAGA AGGAATTGAGAAGATATAAAGATCCAGAGCGCGTCCATGAAATAGAAGAACGTTTATCATGGATTGATAAACAACTAAAATCTGGCTCAGCAAAGCATAT TGATGCTAAGATATTGGCTGATCATAAGAAGAAAGAGAGAGAAGCAGCAAAGCAGGGAAAACGTCCTTTTTATATTAAAAAATCTGAAATCAGGAAGCAA AGGCTTATTGAAAAATATAAGCATCTCAAGTCATCTGGTAAACTTGAATCATTTGTTGAGAAAAAGAGGAGGAGGAATGCTGCAAAGGACCATAGATACA TGCCATATCGTAGATCTGATGACAACATTGAATAAGGTTTTTAGCTTTATGGTTCTTTTGTATGCTTATAATAGAGGGAGATTGCATCAAAGAAAAGGAA CAGAAAAAACTGGTATATGCATTTGTCTTCCATATAATCCCTTTTCGAAAACCTTAAGTGTTTGTTTTGTTTGGAAGTTAGATTTTGAAGAGAAAGGGAG AGATAATGAAAGTTTCAGAACCATGAAATACATACACTTTTGGGATGATTATGAAGTCTTATCTTTAAGGTTTCAAAACCATGAAATACATTTGTGGGAT GACTGTGAAGTATATTCTCTTTCTCTTTATTCCCATTCAAAACACAACTAACAAACTCTAATCGATAGTTCATTGTGGATAAGATTATATGCAATTTTGT CTATTTTGCAAGATTTACTATGCACTTGTATGGAAATGGGTAACATCCCAATATTTGGAGTTGAGAACAGGTCCTCCAACATTTTAGTTATTTCATTTAG TGCAATATTAATAGGTCAATGTTGTGATTAAG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_31360; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_222304
| Blastp | Ribosomal RNA processing protein 36 homolog from Nematostella with 36.65% of identity |
|---|---|
| Blastx | Ribosomal RNA processing protein 36 homolog from Mus with 39.71% of identity |
| Eggnog | Component of the 90S pre-ribosome involved in the maturation of rRNAs. Required for early cleavages of the pre-RNAs in the 40S ribosomal subunit maturation pathway (By similarity)(ENOG4111T3E) |
| Kegg | Link to kegg annotations (NEMVE_v1g245966) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019431463.1) |
| Pfam | rRNA biogenesis protein RRP36 (PF06102.11) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |