| Id Trinity | FTRINITY_DN53175_c1_g3_i5 |
|---|---|
| Name Transcript | Ll_transcript_222727 |
| Sequence | AAAGTTGTTTCCAATCTCTCACTCTCTCTCTCTCTCTCTCTCTCTATTTGTTCTTGTTCCTCGGTTAAATTAATGCCTCTTTCATTCTTTAATTTTAATT TTGTTTGCTATATGAACCTGCATAACCGTTTACTTGTTTTCACTTTACATCGGAGGCTCACCTTTTTCTTCCTAGATTAGGTCTTGTGCATTTAGGGTTC ATGTCTCATTAGTAATGGATGCACTCGTTCATTTATTTTTTGGATGCATCAGAACATGTTGTAATAAAACTTGTGTGGTAGAATATAAGATTAATGGTGT CAGTGGTGTGTTTGAGTATACAGCTCAGTTAGGTGCTAATTCAATAAGGTCTTTTTGAAATAAGCTAAAATGAGCTTATTACAGAAGTTTTTCTTATAAG CTTATTGGAATATGTTAAAAAGAGCTTATAAGAAGGTTATCAACTATTTTTATGTTAGTTTTGTAAGTTCATTTTCCTAAGCTGCTCTCATAAGCCCAAA GAAGCTCTACATTCTTTCAAGCACCTGATATAAAGTAAAACGTTTTGATTCTGGCGAAAAGGATGGAGCTGAAGAGTAAAGACCTGCTAAACATTTCTGC CCATGAATCAAATGCTACATTAATATGAATATGCCAAATTATGCTACATTTTTTCGTTGCACCATTTGAGTTCTTTGTAACAGTTACTTGCTTTCTCGAT TAGCCTTTGTTGTGTCGTTTTTGTGAAAAATTGTGTCAACTTTCAACAATGCAATTCATGCAGGAAGAGGCACTCAAGTTCAGGTGCTTCAGCACATGAA AACTCAGCTTCAAAGCTAAGTGAAACTGGGCTCTTTTATGATGGACAGAACATTCATAGTCCTACTAATGCAGCACTTTTTCTTGAAAATATCAAACAAG AGGTTGATGACTTTGAAGAAAAGACTCCATATTCCTCTAGAAAGAGGCTATCTGCTGATATTCCTGGAGTCCCTGGTGTGGATGCTGGTTTTGACTCTGT ACGTCACTCGTTAAAGGCGTGTAAGCAAGAGGGTGATTCGTTGGGAGATGGTGCAGAATCAATTTTCACTTTGTTTGCATCTCTGCTTGATTCTTCTCTG CAAGGATTAATGCCTTTTCCTGATCTGATACTGAGATTCGAAGATGCATGTCGAAATGTTTCAGAGTCTACCAGGTATGGTTTGAATTTAAGGCATCGGG TGGTTGAAGATAAATTGATGAGGCAGAAGGCCCAGTTCTTGCTTGATGAGGCGGCAACATGGTCTCTCCTATGGTTCCTTTATGGGAAAGTTACTGAAGA ACTATCTAAAGATCAAATACTGGTGTCAGAAACCTCTCATGTAGTGGCTTGTGAGTTTGTTGCAGAGGACCATACAGCTCAGTTAAGCCTTCGGATAGTC CAGTGGTTAGAAGGCTTAGCTTCTAAAGCACTTGACTTGGAAGCAAAGGTGCGTGGATCTCATGTTGGTAGTTATCTCCCCAGTTCTGGAGTTTGGCATC ATACTCAGCGTTACCTAAAGAAAGGAGCTTCCGACATGAATGTTGTTCATCACCTGGACTTTGATGCCCCAACACGTGAAAATGCAAATATTCTGCCTGA TGACAAGAAACAAGATGAATCTCTTTTAGAAGATCTGTGGACTCTTTTAAGGGCTGGAAGACTAGAAGAGGCATGTGGACTTTGTCGTTCTGCTGGACAG CCATGGAGAGCTGCCTCTCTATGCCCATTTGGCGATTTGAACCAATTTCCTTCCATCGACACTCTGGTAAAGAATGGTAAAAATAGAACCTTACAAGCTG TAGAATTTGAAAGTGGCATTGGTCATCAGTGGCATCTTTGGAAATGGGCTTCATATTGTGCATCAGAGAAAATGGCAGAGCTTGGTGGGAAATATGAAGC AGCTGTATATGCAGCTCAATGTAGCAACCTAAAACAGATGCTTCCACTCTGCACTGACTGGGAGTCAGCATGCTGGGCAATGGCAAAGTCTTGGCTAGAT GTTCAAGTGGACTTGGAAGTCACTCGTTCACTGCCAGGGGGAGTTGATCAACTTAGAACTTTTGGTGATGCAATTGATGGAAGCCATGGACTTGCTAATG GTTCCATTGACGCTTCAAATGGACCTGAAAATTGGCCAATTCAAGTTTTGAATCAGCAACCACGACATATTTCGTCTCTTCTTCAGAAACTTCATTCAGG GGAATTGATCCATGAAGCTGTTACTCGACAGTGCAAAGAGCAACAGCGACAAGTTCAGATGGCTTTAATGCTAGCGGACATACCACATATACTAGATCTT ATATGGTCATGGATAGCACCTTCAGAAGACGACCAAAATGTATTTAGGCCCCATGGAGATCCTCAAATGATACGATTTGGTGCACATCTTGTCCTTGTGC TTAGATATTTACTTGCCGAGCAAATGAAGGATACCTTCAGAGACAAGATTCTAAGTGTTGGTGATAACATTCTGCATGTGTATGCTCTTTTTCTCTTTTC GAAGGAGCATGAAGAGTTGGTGGGCATATATGCTTCTCAGCTTGCAGCTCACCGCTGTATCGACCTCTTTGTGCATATGATGGAACTTAGGCTGAACAGC AGCATACATGTCAAATACAAGATATTTGTTTCGGCTATGGAGTATTTACCGTTTTCTTCTGTGGATGATTCTAAGAGCAACTTTGAAGACATTATTGAGA GAATTTTGTTGAGATCTCGAGAGGTCAAGGTCAGCAAATATGATAACCTGTCAGATGTTGCAGAACAGCACAGATTACAGAGTCTTGAAAAAGCTAAAGT CATTCAATGGCTTTGCTTTACACCACCATCCACAATTACTAATGTCAAAGATGTTAGCGAAAAACTTCTTCTCCGAGCATTGGTACACAGGTAGGTCATG TGTCATACTATATGCCTCATCATATTGGATTATCTGATAAGCTGTGCTTCTGAAAGTCAGACCAACAAAAGTGATGAAACCTAGGAATGGTGTTGGACCT TTCACCCTTAATTATTGTATAAATGTTTGCCATATCATGTCAGTACACTATTGACTGCCTATTTCATTTTGTATTCG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_31386; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_222727
| Blastp | Nuclear pore complex protein NUP107 from Arabidopsis with 69.53% of identity |
|---|---|
| Blastx | Nuclear pore complex protein NUP107 from Arabidopsis with 65.12% of identity |
| Eggnog | nuclear pore complex protein(ENOG410XRUG) |
| Kegg | Link to kegg annotations (AT3G14120) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019460751.1) |
| Pfam | Nuclear pore protein 84 / 107 (PF04121.12) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |