Ll_transcript_223315

• Id Trinity: FTRINITY_DN53193_c3_g1_i1
• Name Transcript: Ll_transcript_223315
• Sequence: CTCACATATAAAATTACGTCATGTAGGTTCTCTGTTACATCATAGAGTTGAAATTCCATTATGAGAAACATGTACATTAAATTTGGTTAATTTGCTAGCT TTCCATTCAATTTTATTTGGATAGAATGATGTTTTAAACTCTATTTTTTCTGTAAAAGAAACACTTTGGTAGTTGGAATCTCAACTGTTAACACATTGAT ACAGATAGCACCAAGTCGGTCAACGTATAACAACTTGATAAATGCATGTGGATCTAGTGGAAATTGGAAAGAAGCTCTTAATATTTGCAAGAAAATGACA GACAATGGAGTTGGGCCTGATCTTGTTACTCACAATATTGTGTTATCTGCATTTAAAAGTGGGGCTCAATATTCCAAAGCTCTGTCTTATTTTGAACTAA TGAAGGGAACTCATATTCGTCCAGACACAACTACGCTTAATATCATCATCCATTGTCTGGTGAAGCTTGGACAATATGACAAAGCCATTGATATTTTTAA TTCCATGAGGGAAAAGAAGTCAGAATGCCACCCTGATGTTGTAACTTTCACTAGTATCATCCACTTGTATTCTGTATGTGGGCAAGTTGAAAACTGTGGG GCTGCGTTCAGTATGATCCTTGCAGAAGGGCTGAAACCAAATATAGTCTCATATAATGCACTAATAGGTGCGTATGCTGCTCGTGGGATGGACAAGGAAG CATTTTCTGTTTTCAGTGAAATAAATCAGAATGGTTTACGCCCAGATATTGTATCCTATACATCTCTGCTTAATGCTTATGGAAGATCACAAAAGCCCCA AAAAGCAAGGGAAGTATTTGAAATGATAAAGAGGAAAAAGTTGAAGCCAAACGTTGTCAGCTACAATGCACTGATTGATGCCTATGGATCTAATGATTTG TTGGCTGAGGCAATTGAAATCTTGCGTGAGATGGAGCAAGATGGTATTTATCCAAATGTGGTCTCAATATGCACTCTCTTGGCTGCCTGTGGGCGATGCA GTAAGAAGGTGAAGATTGATACAGTGCTATCAGCAGCAGAGATGCGAGGCATTAAATTGAATACATTTGCATATAATTCAGCTATAGGAAGCTATATGAA TGTCGGGGAATACGACAAAGCTACAGGCTTGTATAAATCTATGAGGAAGAAGAAAATAAAACCTGATTCTGTTACCTACACTGTGTTGATAAGTGGTTGT TGTAAGATGTCAAAATATGGTGAAGCCCTATCTTTTATGGAAGAGATGATGCAATTAGAACTTCCTTTGTCCAAAGAGGTCTACTCATCTATCATATGTG CCTACAGCAAACAAGGCCAAATTGCAGAAGCAGAATCTACATTCAACTTGATGAAATCATCTGGTTGCTACCCTGATGTGGTTACATACACTGCAATGCT TGATGCATACAATGCAGCCGAGAATTGGGAGAAAGCATATGCTCTCTTTGAAGAAATGGAAGTAAATGGCATCAAGCTAGATACAATTGCATGTGCAGCC CTAATGCGAGCTTTCAATGAAGGTGGCCAGTCTGGAAAGGTCCTTAGTCTTGCAAAGAATATGCGAGAAAAAGAGATTCCTTTTAGTGAAACCATCTTTT TTGAGATGGTATCTGCCTGTAGCTTATTACATGATTGGAGGACAGCTGTTGATATGATCAAGTACATAGAGCCCTCACTTCCTGTAATTTCATCTGGATG TTTGAATTTGTTCCTGCAATTTTTAGGAAATAGCGGGAAAAATGAAACTATGTTGAAGTTATTCTACAAAATGCTTGCATCGGGTGCTGAAGTTAACTTC AATACTTATTCTATTTTATTGAAGAACCTTTTATCCTCGGGAAATTGGAGGAAATATTTAGAGGTACTGGAATGGATGGAAGATGCAGGAATTTATCCAT CAAATGGAATGTACCGCGATTTATCCTCCTTTTCGCAAAGGTGTTGTGGGGAAGAAAATGCTGCAATCATAAAAGAAAGACTTG
• Tissue: flowers
• Gene name: LI_gene_31542;
• Additional information: details;

Expression of Ll_transcript_223315

FPKM

• FPAB: 1.2
• FPNAB: 3.2
• LF1: 3.2
• LF2: 3.6
• LF3: 2.5
• LF4: 3
• UF1: 3.4
• UF2: 3.1
• UF3: 2.6
• UF4: 2.1

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_223315

• Blastp: Pentatricopeptide repeat-containing protein At2g41720 from Arabidopsis with 66.07% of identity
• Blastx: Pentatricopeptide repeat-containing protein At2g41720 from Arabidopsis with 67.28% of identity
• Eggnog: Pentatricopeptide repeat-containing protein(ENOG410Z7Z7)
• Kegg: Link to kegg annotations (AT2G41720)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019434154.1)
• Pfam: Pentatricopeptide repeat domain (PF13812.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;