Ll_transcript_223317

• Id Trinity: FTRINITY_DN53193_c3_g1_i3
• Name Transcript: Ll_transcript_223317
• Sequence: CCGGGATCTTTCTCCATGTCCACCACAACACTTCACTCCACTTATCATCTCAAACTCACCGATTCAACTCGCCCTCACACCACTCGCAAACGCAAACCGA ACGAGTTACCATTCAAGGAGACTCAGCAAGGTTTCGTCGACTACGACAATGGCCACCACGACGTTTCCAACAAGGTCACCGGAATCCTCAAGGACGGAAT TCCCGCCCGGTACCGAATCCGAGTCGCCGGAAACCGATTCCAGAAGGATTGGACCGTTTCTGAGGTCGTTGAATTGGTTCTCAGCCTCGACCTTAGTGAT GATATTGACGGTTTATTGAACCGATGGGTTGGACGCTTCGCACGCAAGAATTTCCCTTACCTTATTAAGGAGTTGAGTCAGAGAGGGAATATTGAACATT GTAACCGCGTTTTCGAGTGGATGAAGAAGCAAAGGAATTACTGTGCTCGGAATGATATATACAATATGATGATAAGGTTGCATGCAAGGCATAATCGAGT AGACCAGGCACGTGGCTTATTTTTTGAGATGCAAAAGTGGAGGTGCAAGCCTGATGTTGAGACTTACAATGCAATTATCAATGCACATGGTCGAGCTGGA CAATGGCGTTGGGCTAAGAATATCATGGAAGACATGCTACGTGCAGCTATAGCACCAAGTCGGTCAACGTATAACAACTTGATAAATGCATGTGGATCTA GTGGAAATTGGAAAGAAGCTCTTAATATTTGCAAGAAAATGACAGACAATGGAGTTGGGCCTGATCTTGTTACTCACAATATTGTGTTATCTGCATTTAA AAGTGGGGCTCAATATTCCAAAGCTCTGTCTTATTTTGAACTAATGAAGGGAACTCATATTCGTCCAGACACAACTACGCTTAATATCATCATCCATTGT CTGGTGAAGCTTGGACAATATGACAAAGCCATTGATATTTTTAATTCCATGAGGGAAAAGAAGTCAGAATGCCACCCTGATGTTGTAACTTTCACTAGTA TCATCCACTTGTATTCTGTATGTGGGCAAGTTGAAAACTGTGGGGCTGCGTTCAGTATGATCCTTGCAGAAGGGCTGAAACCAAATATAGTCTCATATAA TGCACTAATAGGTGCGTATGCTGCTCGTGGGATGGACAAGGAAGCATTTTCTGTTTTCAGTGAAATAAATCAGAATGGTTTACGCCCAGATATTGTATCC TATACATCTCTGCTTAATGCTTATGGAAGATCACAAAAGCCCCAAAAAGCAAGGGAAGTATTTGAAATGATAAAGAGGAAAAAGTTGAAGCCAAACGTTG TCAGCTACAATGCACTGATTGATGCCTATGGATCTAATGATTTGTTGGCTGAGGCAATTGAAATCTTGCGTGAGATGGAGCAAGATGGTATTTATCCAAA TGTGGTCTCAATATGCACTCTCTTGGCTGCCTGTGGGCGATGCAGTAAGAAGGTGAAGATTGATACAGTGCTATCAGCAGCAGAGATGCGAGGCATTAAA TTGAATACATTTGCATATAATTCAGCTATAGGAAGCTATATGAATGTCGGGGAATACGACAAAGCTACAGGCTTGTATAAATCTATGAGGAAGAAGAAAA TAAAACCTGATTCTGTTACCTACACTGTGTTGATAAGTGGTTGTTGTAAGATGTCAAAATATGGTGAAGCCCTATCTTTTATGGAAGAGATGATGCAATT AGAACTTCCTTTGTCCAAAGAGGTCTACTCATCTATCATATGTGCCTACAGCAAACAAGGCCAAATTGCAGAAGCAGAATCTACATTCAACTTGATGAAA TCATCTGGTTGCTACCCTGATGTGGTTACATACACTGCAATGCTTGATGCATACAATGCAGCCGAGAATTGGGAGAAAGCATATGCTCTCTTTGAAGAAA TGGAAGTAAATGGCATCAAGCTAGATACAATTGCATGTGCAGCCCTAATGCGAGCTTTCAATGAAGGTGGCCAGTCTGGAAAGGTCCTTAGTCTTGCAAA GAATATGCGAGAAAAAGAGATTCCTTTTAGTGAAACCATCTTTTTTGAGATGGTATCTGCCTGTAGCTTGTAAGTTCAAATTTGTCCCTATATCTCCAGG GAAAACATTTTAATTAAACATTAAACCTGTCATTCTCTGGTTCTTAATTTTTTACTGGATTTCGTGGAGCTTCTAAAAATATTCATCTCCATAGTGCTTC CTCTGTTAGTGTAAGTTATTGCTAATTGAGGTTGAAGTTTGTTTACTATTTTCCTAATCTAGACATGATGGCATTTTTCCACCAGATGCAAAATTCTTAT GGGTTAATACTTCTCATAATTAGGTTATTACTTGCCACTTCGATTGCTGTTTAAGCAGTAGATGGCCCTTATTCTTCAAGCACAATTTGTTGAAATTTCA TATGTTTTCCTCCCATTTGATATATCTTTGTAGTCATTATTATTTTTTCACAATAATATTATGTTAAGATTTTGTTAATTTTTTTATTGGTGGAACTTCG ATTAGAATAACATATTCTGATGCTCAAAAGACTAGGCAAGAAGCATAGAGAATAGGCCCTATTACTTAAACTGCTTTGATTAGATAAGCATATTTTATGG TATGATTTTTTTAATAGAGTTATTGTATTTTATTATTATTTCCCTGTTAAACTAAATGTGTCTTTTGGCGTAAGATTACATGATTGGAGGACAGCTGTTG ATATGATCAAGTACATAGAGCCCTCACTTCCTGTAATTTCATCTGGATGTTTGAATTTGTTCCTGCAATTTTTAGGAAATAGCGGGAAAAATGAAACTAT GTTGAAGTTATTCTACAAAATGCTTGCATCGGGTGCTGAAGTTAACTTCAATACTTATTCTATTTTATTGAAGAACCTTTTATCCTCGGGAAATTGGAGG AAATATTTAGAGGTACTGGAATGGATGGAAGATGCAGGAATTTATCCATCAAATGGAATGTACCGCGATTTATCCTCCTTTTCGCAAAGGTGTTGTGGGG AAGAAAATGCTGCAATCATAAAAGAAAGACTTGAATCCTTGAAAAGAAAATCAGGGAACCAAGTCTCTCCAAGCCAAACCGAATCTCCCACTCTTTGTTG ATCATCATCATGGGATGGATATTTTGCTTACCATAACACTATGTCCCATACTACTGAGAGTATTTCATCCCAGAAGTTGGAACTCAATTTATTGGATCAT TTGCTATCCTTTGTAACTCACATTATGTTCCTTTGTAGATAATAGTTTCAGACTCTAATTTACTCATTTTTACTTCTTTTCACGCACTTGTAATTCACAT GTACCTATGGCTTCATGTGACATGGAACTTATGGTAGAGATTCTCGTATAATATTTGATAATAAAGTATCTCATAGTATAAGGAGATAAACTATTCCCTG CCAATAAAATTATAACATGTGTCATGTATCAACATTTTCTACAAAAATATTTCTAAAGTTAAAAAAATAGTGCACATGTCATATTTTTTGTTGGCCAAAG GAGATAAGTTATCTCCATGTTATAATATTCTTATATAATGTAATGATATATATGTATTAGTATTGATAGTGTATAAGTTTGATACATCATCAATTTATTA TTTTAACTATTAATGTTCAATCATCATTGATTTTTCAAAA
• Tissue: flowers
• Gene name: LI_gene_31542;
• Additional information: details;

Expression of Ll_transcript_223317

FPKM

• FPAB: 1
• FPNAB: 1.4
• LF1: 2.6
• LF2: 2
• LF3: 2.1
• LF4: 1.7
• UF1: 2.3
• UF2: 2.3
• UF3: 2.6
• UF4: 1.3

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_223317

• Blastp: Pentatricopeptide repeat-containing protein At2g41720 from Arabidopsis with 69.45% of identity
• Blastx: Pentatricopeptide repeat-containing protein At2g41720 from Arabidopsis with 69.45% of identity
• Eggnog: Pentatricopeptide repeat-containing protein(ENOG410Z7Z7)
• Kegg: Link to kegg annotations (AT2G41720)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019434154.1)
• Pfam: PPR repeat family (PF13041.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;