Ll_transcript_223320

• Id Trinity: FTRINITY_DN53193_c3_g1_i6
• Name Transcript: Ll_transcript_223320
• Sequence: CCGGGATCTTTCTCCATGTCCACCACAACACTTCACTCCACTTATCATCTCAAACTCACCGATTCAACTCGCCCTCACACCACTCGCAAACGCAAACCGA ACGAGTTACCATTCAAGGAGACTCAGCAAGGTTTCGTCGACTACGACAATGGCCACCACGACGTTTCCAACAAGGTCACCGGAATCCTCAAGGACGGAAT TCCCGCCCGGTACCGAATCCGAGTCGCCGGAAACCGATTCCAGAAGGATTGGACCGTTTCTGAGGTCGTTGAATTGGTTCTCAGCCTCGACCTTAGTGAT GATATTGACGGTTTATTGAACCGATGGGTTGGACGCTTCGCACGCAAGAATTTCCCTTACCTTATTAAGGAGTTGAGTCAGAGAGGGAATATTGAACATT GTAACCGCGTTTTCGAGTGGATGAAGAAGCAAAGGAATTACTGTGCTCGGAATGATATATACAATATGATGATAAGGTTGCATGCAAGGCATAATCGAGT AGACCAGGCACGTGGCTTATTTTTTGAGATGCAAAAGTGGAGGTGCAAGCCTGATGTTGAGACTTACAATGCAATTATCAATGCACATGGTCGAGCTGGA CAATGGCGTTGGGCTAAGAATATCATGGAAGACATGCTACGTGCAGCTGTGTGTACTCTATAGCACCAAGTCGGTCAACGTATAACAACTTGATAAATGC ATGTGGATCTAGTGGAAATTGGAAAGAAGCTCTTAATATTTGCAAGAAAATGACAGACAATGGAGTTGGGCCTGATCTTGTTACTCACAATATTGTGTTA TCTGCATTTAAAAGTGGGGCTCAATATTCCAAAGCTCTGTCTTATTTTGAACTAATGAAGGGAACTCATATTCGTCCAGACACAACTACGCTTAATATCA TCATCCATTGTCTGGTGAAGCTTGGACAATATGACAAAGCCATTGATATTTTTAATTCCATGAGGGAAAAGAAGTCAGAATGCCACCCTGATGTTGTAAC TTTCACTAGTATCATCCACTTGTATTCTGTATGTGGGCAAGTTGAAAACTGTGGGGCTGCGTTCAGTATGATCCTTGCAGAAGGGCTGAAACCAAATATA GTCTCATATAATGCACTAATAGGTGCGTATGCTGCTCGTGGGATGGACAAGGAAGCATTTTCTGTTTTCAGTGAAATAAATCAGAATGGTTTACGCCCAG ATATTGTATCCTATACATCTCTGCTTAATGCTTATGGAAGATCACAAAAGCCCCAAAAAGCAAGGGAAGTATTTGAAATGATAAAGAGGAAAAAGTTGAA GCCAAACGTTGTCAGCTACAATGCACTGATTGATGCCTATGGATCTAATGATTTGTTGGCTGAGGCAATTGAAATCTTGCGTGAGATGGAGCAAGATGGT ATTTATCCAAATGTGGTCTCAATATGCACTCTCTTGGCTGCCTGTGGGCGATGCAGTAAGAAGGTGAAGATTGATACAGTGCTATCAGCAGCAGAGATGC GAGGCATTAAATTGAATACATTTGCATATAATTCAGCTATAGGAAGCTATATGAATGTCGGGGAATACGACAAAGCTACAGGCTTGTATAAATCTATGAG GAAGAAGAAAATAAAACCTGATTCTGTTACCTACACTGTGTTGATAAGTGGTTGTTGTAAGATGTCAAAATATGGTGAAGCCCTATCTTTTATGGAAGAG ATGATGCAATTAGAACTTCCTTTGTCCAAAGAGGTCTACTCATCTATCATATGTGCCTACAGCAAACAAGGCCAAATTGCAGAAGCAGAATCTACATTCA ACTTGATGAAATCATCTGGTTGCTACCCTGATGTGGTTACATACACTGCAATGCTTGATGCATACAATGCAGCCGAGAATTGGGAGAAAGCATATGCTCT CTTTGAAGAAATGGAAGTAAATGGCATCAAGCTAGATACAATTGCATGTGCAGCCCTAATGCGAGCTTTCAATGAAGGTGGCCAGTCTGGAAAGGTCCTT AGTCTTGCAAAGAATATGCGAGAAAAAGAGATTCCTTTTAGTGAAACCATCTTTTTTGAGATGGTATCTGCCTGTAGCTTGTAAGTTCAAATTTGTCCCT ATATCTCCAGGGAAAACATTTTAATTAAACATTAAACCTGTCATTCTCTGGTTCTTAATTTTTTACTGGATTTCGTGGAGCTTCTAAAAATATTCATCTC CATAGTGCTTCCTCTGTTAGTGTAAGTTATTGCTAATTGAGGTTGAAGTTTGTTTACTATTTTCCTAATCTAGACATGATGGCATTTTTCCACCAGATGC AAAATTCTTATGGGTTAATACTTCTCATAATTAGGTTATTACTTGCCACTTCGATTGCTGTTTAAGCAGTAGATGGCCCTTATTCTTCAAGCACAATTTG TTGAAATTTCATATGTTTTCCTCCCATTTGATATATCTTTGTAGTCATTATTATTTTTTCACAATAATATTATGTTAAGATTTTGTTAATTTTTTTATTG GTGGAACTTCGATTAGAATAACATATTCTGATGCTCAAAAGACTAGGCAAGAAGCATAGAGAATAGGCCCTATTACTTAAACTGCTTTGATTAGATAAGC ATATTTTATGGTATGATTTTTTTAATAGAGTTATTGTATTTTATTATTATTTCCCTGTTAAACTAAATGTGTCTTTTGGCGTAAGATTACATGATTGGAG GACAGCTGTTGATATGATCAAGTACATAGAGCCCTCACTTCCTGTAATTTCATCTGGATGTTTGAATTTGTTCCTGCAATTTTTAGGAAATAGCGGGAAA AATGAAACTATGTTGAAGTTATTCTACAAAATGCTTGCATCGGGTGCTGAAGTTAACTTCAATACTTATTCTATTTTATTGAAGAACCTTTTATCCTCGG GAAATTGGAGGAAATATTTAGAGGTACTGGAATGGATGGAAGATGCAGGAATTTATCCATCAAATGGAATGTACCGCGATTTATCCTCCTTTTCGCAAAG GTGTTGTGGGGAAGAAAATGCTGCAATCATAAAAGAAAGACTTGAATCCTTGAAAAGAAAATCAGGGAACCAAGTCTCTCCAAGCCAAACCGAATCTCCC ACTCTTTGTTGATCATCATCATGGGATGGATATTTTGCTTACCATAACACTATGTCCCATACTACTGAGAGTATTTCATCCCAGAAGTTGGAACTCAATT TATTGGATCATTTGCTATCCTTTGTAACTCACATTATGTTCCTTTGTAGATAATAGTTTCAGACTCTAATTTACTCATTTTTACTTCTTTTCACGCACTT GTAATTCACATGTACCTATGGCTTCATGTGACATGGAACTTATGGTAGAGATTCTCGTATAATATTTGATAATAAAGTATCTCATAGTATAAGGAGATAA ACTATTCCCTGCCAATAAAATTATAACATGTGTCATGTATCAACATTTTCTACAAAAATATTTCTAAAGTTAAAAAAATAGTGCACATGTCATATTTTTT GTTGGCCAAAGGAGATAAGTTATCTCCATGTTATAATATTCTTATATAATGTAATGATATATATGTATTAGTATTGATAGTGTATAAGTTTGATACATCA TCAATTTATTATTTTAACTATTAATGTTCAATCATCATTGATTTTTCAAAA
• Tissue: flowers
• Gene name: LI_gene_31542;
• Additional information: details;

Expression of Ll_transcript_223320

FPKM

• FPAB: 0
• FPNAB: 0.6
• LF1: 0.8
• LF2: 0.1
• LF3: 0.5
• LF4: 0.4
• UF1: 0.3
• UF2: 0.4
• UF3: 0.1
• UF4: 0

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_223320

• Blastp: Pentatricopeptide repeat-containing protein At2g41720 from Arabidopsis with 69.75% of identity
• Blastx: Pentatricopeptide repeat-containing protein At2g41720 from Arabidopsis with 70.89% of identity
• Eggnog: Pentatricopeptide repeat-containing protein(ENOG410Z7Z7)
• Kegg: Link to kegg annotations (AT2G41720)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019434154.1)
• Pfam: Pentatricopeptide repeat domain (PF13812.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;