Id Trinity | FTRINITY_DN53195_c0_g1_i11 |
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Name Transcript | Ll_transcript_223234 |
Sequence | ATAGAATTCCACAAATGAAATCTAGGTCCAAACTCCAAACTCGAAACTCAAAATCCACCGAAAACAAAGAGCGGGAGAAGAACAAAACTCTCAACTCTTT CACACTTTCATTTCACTCTTCACTTCACCTAATCTCACTTCCATTCCAAAACGACAATGTCCATCGGCGTTCGTCGCTTAACGGTTCTCGGCGAGTTCAA ACCCTTTGGTCTCATCGCCGAAGCTCTCGACGGTAAAACCCTTGACTCTGTAACCGCCAACTACGATTACTTCCTTTTCGATCCACAAGCCGCTCGAGAC CGAGTCGCCGAAGATGATTGCGATGAGGTTGCTTCTGCATTGAGCAACCGCGGTGATCATGAGTTATTCATCCGAGGGAATCGGATTATATGGTCGACTG GTGCAAGAGTCTTTAGGAGATTTACCTTGAGTTCCTCTATTGTTAAGGTGTGCTGGTGTCGTTTGGGTCATTCAGCAGAAGCTCTTCTATGTATATTACA AACTGATTGTTTGACAATCTATAATACCTCTGGGGAAGTAGTATCACTTCCACTTCATTCTGCAATCACATCAATATGGCCTCTTCCATTTGGTTTGTTA CTCCAGCAGGAAGTGGAAGCAAATATATCATCACATGTTCCTTTTTCATCCACAAGCCCTTTGCTTAGTACACGCGATATGCTGCTTAGTGCCTCTCATC ATATCCAAAAGGGAGAGGGAACTTCGAAGTCCTCACATCTGATTCTGATGGATCCACTGGATGAGCAACAGCCAACTTTTATTGTAGAAAGAGGGAAGTT GAACATAATGAAGGAATATGATGAAAAGACAATTTGGACAAGTGACCAGGTCCCGCTCATGGCATCCTATAATAAAGGAAAGATGCAGCACTCCCTGTGG GTTGTAGAAATCATCAATTCTAATATTGATGAGTCAACCACTGGTTTGTTAAATGTAGATCCTATGGGTGTATTGCCAAAACATTTGTCATTTCGTAGAA TATGGCAGGGAAAAGGTTCTCAAGCAGCTGCTTATAAGGTCTTTATGGCCACAGATGATGATGCAGCTCCTGTTGTTTGCTTTATTCACCAAGAACAAAG AAAGTTGTTGTCTGTCAGGCTTCAGTGTGTTGAAATAAATAACGAGACTGTGTTTGACGTTAAGCCTGATATGAGCTGGACCATAGCTGCACTTGCAGCT TCACCTGTGACAGTAACTTGCCCTAGGGTCAAAGCTGGGCCACTTCCATATTCAGACATATTGGTTTTGGCTCCGGAAAATGTTCTGCTTCTCTATTCTG GGAAGCAATGCCTGTGTAGATATGTACTACCTTCTTTCTTAAATAAAGATAAGCTTTTGCATGATTTGGAGTTTCCAGAAACATCTTCTCTTTCCAATGA TTTAAAGATTACTGGGCTGGCTGATGCTGTTGATGGGCGTGTCAATGTGATAGTAAATTATAGGCAGGTGTTTAGATGTGCATTACAACAAAGTCCTTCA TCATTATTAGCTAGTGATTGCAACACAGCACTTGCTGAGGGGCTTAATTCTAGTTCCTACAGACATTTTCTTGGTCTTCTCTGGAAAGATGGTGACCCTG CTCATTTGTCAGAGTCAGGGTCTAGTGTTGATTCAGAATGGGAGTCTTTTTGTGGTGTAATTATGCAAATCTGTAGAAAATCTAACATATCTCAAAAGCA GTCAGGTTCAGGGTCACACTCTGCTTGGGACTTCCTTCTCTCTAGTAAATTTCATGATAACTTCTGCAAAGTAAACTCCATGTTTGGAAGATCTTGTGCA GTATTACTTGATCAGCAGGAATCAAATTTCCCTAGATCATCTGTTGTTGACAGACAAAGTTCTGAAAAGCCATTTCATACTGAACTTTTATTAGAATGTT TAGAATCTCTTCATGCACTTTACGAGAGCCTGAAACTGGATAATCTTCGCAAACGGGACTTAGAGCTTCTAGCAACGCTCTTATGCAATATTGCTCAATT TCTTGGTGAGGGCAACTACTTGGACCATTATATTCGTGATTTCCCTGGTCTCTATAAAAAGTTTCTGCTGCATGGAACTAGTTTTTCCCATAAAGTTTCT CCAAGTTTATTCAGATGGCTTGAGAACTGCTTACAACATGGATATGGTTATGCCAATATTAGTGACCTTCCACCTTTAGTCCGCAAAGATGGAAGTTCCG TGGTTAGCTTGGCCCGGAAAATAGTTTCCTTTTATAGTATATTAACTGGTGCTAAATTGCTGGGAAAGAAGCTTTCTTCTGGGGTTTACTGTAACATTGC CATTGGATCACATTCCTTAAATGAGGAACTTACTGTTTTAGCAATGGTTGGTGAAAGGTTCGGACTTCAACAGCTGGACTCACTGCCTTCTGGTGTTTCT CTTCCACTTCGTCATGCAGTAGATAAGTGTCGAGATTCTCCTCCCAATGACTGGCCAGCTGCTGCTTATATCCTTCTTGGTCGACAAGATTTAGCAATGT CAACTTTGGCACGGGAATGCAAGTATAGGGAAATTCAAACACCATCCAATGTGAATGTAATCTCTATGTCCACACCTTATATGCTAAATCTGCATCCTGT GACAATATCTTCTACTATCTCTGATGCAATTGGATTGGAAGGAACAAAGTTTGAAGATACAGATTCAGTTGATGGGTCTACGACTGATGGTATGGAGCAT ATTTTCAACTCTAGCACACAGTTGCGTTATGGTCGCGATCTGAGGTTGAATGAGGTTAGACGCCTTTTGTGCTCTTCCAGACCTGTGGCAATTCAAACAT CTGTTAACCATAGTGCTTCTGATCAGGACCTCCAGCAGGCTCAATTGTGGCACCTTGCACAAAGGACCACTTCACTGCCTCTTGGACGTGGGGCATTTAC TCTGGCAACTATATATACACTCTTAACTGAGGCCTTTACAGTTCCGAAGCTTGTGTTAGCAGGTAGGTTGCCAGCCCAACAGAATGCAACTGTTAATCTT GACCCCAATATCAGAAACATACAAGAGCTCAAGTCTTGGCCTGAGTTTCATAATGCTGTTGCTGCTGGACTTAGATTAGCCTCTCTTCAGGGAAGAATGT CGAGAACATGGATAATTTATAACAAACCTGAGGAGGCAAATTCTGTTCATGCTGGACTTCTCTTTGCTCTAGGATTGCATGGATATTTGCGTGTGCTAGT TATTACTGACATTTACCAGTATTTAAATCAGGGGCATGAAACTACTACTGTAGGATTAATGCTTGGTCTGGCAGCTTCTTATAGAGGTACTATGCAACCA GCAATATCGAAGTGTCTTTATATTCATATTCCCGGGCGGCATCCATCTTCCTTTCCAGAGATAGAAGTCCCAACCCTAGTACAGTCGGCAGCTTTAATGT CTGTGGGGATTCTATATGAAGGTTCAGCTCACCCACAAACAATGCATGTTTTATTGGGTGAAATTGGGCGCCGAAGTGGAGGTGATAATGTTCTTGAGCG GGAGGGTCATGCTGTATCTGCAGGATTTGCACTGGGTCTTGTTGCACTTGGACGAGGGGAAGATACACTTGGTTTTATTGAAACATTAGTGAATCGTCTG TTTCTCTACATCGGCGGAAAAGTTCACACTGAGAGATCTCATTTTTCGACAATCTCAATGGATGAAAATCGTGGTTCTGCACAGATGATGGATGGGACAT CAGTTAATATTGATGTCACTGCACCTGGAGCTACCATTGCTCTTGCTTTGATGTTTTTGAAGACAGAATCTGAGGCTATTGTGTCAAGGCTCTCAATTCC AAATACATGTTTTGATCTGCAATATGTGAGGCCTGACTTCATAATGCTCCGTGTCATTGCTCGAAATTTAATAATGTGGAGCAGAGTTCATCCCTCGAAA GATTGGGTTTTTTCTCAAATTCCTGAAGTTGTAAGATGTGGTGTAGAAGGCCTTGGAGTTGATGGCAATGACATTGATGATATGGATGCTGAGGCTTTTG TACAAGCTTATGTTAATATAGTAGCTGGAGCTTGTATATCTCTTGGGCTGGTATTTGCTGGCACAAGAAATGGAAATGCACAGGAGTTACTTTATGAATT TGCTGTATACTTTCTTAATGAGATCAAGCCTGTGTCCCCACCTAGTGGAAAGGTTTTTCCAAAGGGACTTTCTCGCTATGTTGATCGGCCCACATTGGAG ACATGCCTTCATCTTATAGTTCTTTCTCTATCTGTGGTTATGGCTGGGTCTGGACATTTACAGACCTTACGATTGTTGAAATTCCTAAGGAGCAGAAATT GTGCAGATGGACAGTCTAGTTATGGCATTCAGATGGCTGTAAGCTTAGCTATTGGCTTCTTGTTTCTTGGTGGTGGAATGCGAACATTTTCCACCAACAA CAGTTCCGTTGCTGCTTTGCTCATTACTCTATATCCACGCTTGCCTACTGGTCCAAATGATAACAGATGCCACCTTCAGGCATTTCGCCATTTATATGTC CTTGCAACAGAGGCGCGATGGATTCAGACGGTAGATGTCGACACAGGTCTGCCTGTTTATGCTCCTCTTGAAGTCACAGTCAGAGAAACTGAACATTATG CAGAATCTAGCTTTTGTGAGGTTACCCCTTGCCTTCTGCCAGAGCGAGCTATTTTGAAAAGAATACGTGTTTGTGGGCCTCGCTACTGGCCTCAATTAAT AGACTTTGCTCCTGAAGATAAACCATGGTGGAATTTTGAGGACAAGAAGAATCCATTTAATTCTGGTGTTCTTTATATCAAGAGAAAAGTTGGAGCTTGT TCATATGTTGATGATCCCATTGGTTGCCAGTCACTCCTGTCACGGGCTATGCACAAGGTGTTTGGCCTGACAAGTTCGGAAGCATCTGATACAACCACCA ATATCCATAGTGGACCTGGTTCTGTTACAGTTGATCAGTTGGTTGGTACCTTCTCATCTGATCCCAGTTTGATTGCTTTTGCACAACTTTGCTGTGACCC CTCCTGGCATAACAGATCTGATGTTGATTTCAAGGACTTCTGCTTGCAAGTATTATTTGAGTGTGTGAGCAAGGATAGACCAGCTCTTTTACAGGTCTAT TTGTCATTATACACTACAGTTGAAGCAATGGTTAATCAAGTTGGTACTGGTGCCATTGTTTTTGGTGACTCACTTTCTATATCGGGTTTTAAGCTTGGTC TGATTTATATCGAAGCATTGATGACTGGAAAGTTATGTGCTTCAAAAGGAGGAATCGTGCAATCAACGTTTGTTGGTTCTCTAAGGAAGCAGGTGGAAGA GCTCCTAAATTGTTCCCAGACATTGAAGGATGATTTTCATCAATATTTGAAAATGGGGAAATGGCCTGATGGGGAATCCTCTGATAAACGTTCAATACTT CTTTCTTGGTTCCTTCAGTGGTTTGATGTACCAGCTTCATCTGTAGTCAAAACAACTATCGATAGAGTCAAACCCATGCTCATGTCATCATCTTCAATTC CGTTGTTGCGCCTGTCTTTTCCAAGAACTCATATCAATGCTATTAGCGAGATAGATAAATGTTTATCATGATCATAGGTCACTGGAAGCTTGGTACTTAA GTGTATATGCATTTTGATCTTACTGAAGTTTTGATTATCCAGTTTTAAGGGTCTTGAGTTGTAGAACTGCTTGCACTGAGAATGCAAAGAGCAAATATTG ATGAGCACTAGCTGCAATTTCCAAATTAAACTTAGTAGTATCTCCTTATTTTTAGTATTCAAATATATTGTGATCACAAGCTGGTTTTGTTTGGCCATTT TTTTAAAGGATCATAAGCTCAGCCATCAGTATCTGTGTCAAAATTAGATGCATTCTAAAGTAATTATTTAATAGCAATTGTT BLAST |
Tissue | flowers |
Gene name | LI_gene_31547; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_223234
Blastp | Anaphase-promoting complex subunit 1 from Arabidopsis with 56.83% of identity |
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Blastx | Anaphase-promoting complex subunit 1 from Arabidopsis with 56.61% of identity |
Eggnog | Anaphase promoting complex subunit 1(ENOG410XQ83) |
Kegg | Link to kegg annotations (AT5G05560) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019433711.1) |
Pfam | Anaphase-promoting complex subunit 1 (PF12859.6) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |