Id Trinity | FTRINITY_DN53195_c0_g1_i12 |
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Name Transcript | Ll_transcript_223235 |
Sequence | CTTGCTTGGATATTATTTTACTTGAAAGTGGTTTTGATACCATTTTTGTGTCAACTTTACTAAATTCTGCTCGACATTAATACCGGCAAAGTAACCACTT ATAAGAGCTCAAGTCTTGGCCTGAGTTTCATAATGCTGTTGCTGCTGGACTTAGATTAGCCTCTCTTCAGGGAAGAATGTCGAGAACATGGATAATTTAT AACAAACCTGAGGAGGCAAATTCTGTTCATGCTGGACTTCTCTTTGCTCTAGGATTGCATGGATATTTGCGTGTGCTAGTTATTACTGACATTTACCAGT ATTTAAATCAGGGGCATGAAACTACTACTGTAGGATTAATGCTTGGTCTGGCAGCTTCTTATAGAGGTACTATGCAACCAGCAATATCGAAGTGTCTTTA TATTCATATTCCCGGGCGGCATCCATCTTCCTTTCCAGAGATAGAAGTCCCAACCCTAGTACAGTCGGCAGCTTTAATGTCTGTGGGGATTCTATATGAA GGTTCAGCTCACCCACAAACAATGCATGTTTTATTGGGTGAAATTGGGCGCCGAAGTGGAGGTGATAATGTTCTTGAGCGGGAGGGTCATGCTGTATCTG CAGGATTTGCACTGGGTCTTGTTGCACTTGGACGAGGGGAAGATACACTTGGTTTTATTGAAACATTAGTGAATCGTCTGTTTCTCTACATCGGCGGAAA AGTTCACACTGAGAGATCTCATTTTTCGACAATCTCAATGGATGAAAATCGTGGTTCTGCACAGATGATGGATGGGACATCAGTTAATATTGATGTCACT GCACCTGGAGCTACCATTGCTCTTGCTTTGATGTTTTTGAAGACAGAATCTGAGGCTATTGTGTCAAGGCTCTCAATTCCAAATACATGTTTTGATCTGC AATATGTGAGGCCTGACTTCATAATGCTCCGTGTCATTGCTCGAAATTTAATAATGTGGAGCAGAGTTCATCCCTCGAAAGATTGGGTTTTTTCTCAAAT TCCTGAAGTTGTAAGATGTGGTGTAGAAGGCCTTGGAGTTGATGGCAATGACATTGATGATATGGATGCTGAGGCTTTTGTACAAGCTTATGTTAATATA GTAGCTGGAGCTTGTATATCTCTTGGGCTGGTATTTGCTGGCACAAGAAATGGAAATGCACAGGAGTTACTTTATGAATTTGCTGTATACTTTCTTAATG AGATCAAGCCTGTGTCCCCACCTAGTGGAAAGGTTTTTCCAAAGGGACTTTCTCGCTATGTTGATCGGCCCACATTGGAGACATGCCTTCATCTTATAGT TCTTTCTCTATCTGTGGTTATGGCTGGGTCTGGACATTTACAGACCTTACGATTGTTGAAATTCCTAAGGAGCAGAAATTGTGCAGATGGACAGTCTAGT TATGGCATTCAGATGGCTGTAAGCTTAGCTATTGGCTTCTTGTTTCTTGGTGGTGGAATGCGAACATTTTCCACCAACAACAGTTCCGTTGCTGCTTTGC TCATTACTCTATATCCACGCTTGCCTACTGGTCCAAATGATAACAGATGCCACCTTCAGGCATTTCGCCATTTATATGTCCTTGCAACAGAGGCGCGATG GATTCAGACGGTAGATGTCGACACAGGTCTGCCTGTTTATGCTCCTCTTGAAGTCACAGTCAGAGAAACTGAACATTATGCAGAATCTAGCTTTTGTGAG GTTACCCCTTGCCTTCTGCCAGAGCGAGCTATTTTGAAAAGAATACGTGTTTGTGGGCCTCGCTACTGGCCTCAATTAATAGACTTTGCTCCTGAAGATA AACCATGGTGGAATTTTGAGGACAAGAAGAATCCATTTAATTCTGGTGTTCTTTATATCAAGAGAAAAGTTGGAGCTTGTTCATATGTTGATGATCCCAT TGGTTGCCAGTCACTCCTGTCACGGGCTATGCACAAGGTGTTTGGCCTGACAAGTTCGGAAGCATCTGATACAACCACCAATATCCATAGTGGACCTGGT TCTGTTACAGTTGATCAGTTGGTTGGTACCTTCTCATCTGATCCCAGTTTGATTGCTTTTGCACAACTTTGCTGTGACCCCTCCTGGCATAACAGATCTG ATGTTGATTTCAAGGACTTCTGCTTGCAAGTATTATTTGAGTGTGTGAGCAAGGATAGACCAGCTCTTTTACAGGTCTATTTGTCATTATACACTACAGT TGAAGCAATGGTTAATCAAGTTGGTACTGGTGCCATTGTTTTTGGTGACTCACTTTCTATATCGGGTTTTAAGCTTGGTCTGATTTATATCGAA BLAST |
Tissue | flowers |
Gene name | LI_gene_31547; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_223235
Blastp | Anaphase-promoting complex subunit 1 from Arabidopsis with 63.69% of identity |
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Blastx | Anaphase-promoting complex subunit 1 from Arabidopsis with 64.54% of identity |
Eggnog | Anaphase promoting complex subunit 1(ENOG410XQ83) |
Kegg | Link to kegg annotations (AT5G05560) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019433711.1) |
Pfam | Proteasome/cyclosome repeat (PF01851.21) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |