| Id Trinity | FTRINITY_DN53195_c0_g1_i5 |
|---|---|
| Name Transcript | Ll_transcript_223228 |
| Sequence | ATAGAATTCCACAAATGAAATCTAGGTCCAAACTCCAAACTCGAAACTCAAAATCCACCGAAAACAAAGAGCGGGAGAAGAACAAAACTCTCAACTCTTT CACACTTTCATTTCACTCTTCACTTCACCTAATCTCACTTCCATTCCAAAACGACAATGTCCATCGGCGTTCGTCGCTTAACGGTTCTCGGCGAGTTCAA ACCCTTTGGTCTCATCGCCGAAGCTCTCGACGGTAAAACCCTTGACTCTGTAACCGCCAACTACGATTACTTCCTTTTCGATCCACAAGCCGCTCGAGAC CGAGTCGCCGAAGATGATTGCGATGAGGTTGCTTCTGCATTGAGCAACCGCGGTGATCATGAGTTATTCATCCGAGGGAATCGGATTATATGGTCGACTG GTGCAAGAGTCTTTAGGAGATTTACCTTGAGTTCCTCTATTGTTAAGGTGTGCTGGTGTCGTTTGGGTCATTCAGCAGAAGCTCTTCTATGTATATTACA AACTGATTGTTTGACAATCTATAATACCTCTGGGGAAGTAGTATCACTTCCACTTCATTCTGCAATCACATCAATATGGCCTCTTCCATTTGGTTTGTTA CTCCAGCAGGAAGTGGAAGCAAATATATCATCACATGTTCCTTTTTCATCCACAAGCCCTTTGCTTAGTACACGCGATATGCTGCTTAGTGCCTCTCATC ATATCCAAAAGGGAGAGGGAACTTCGAAGTCCTCACATCTGATTCTGATGGATCCACTGGATGAGCAACAGAAAGAGGGAAGTTGAACATAATGAAGGAA TATGATGAAAAGACAATTTGGACAAGTGACCAGGTCCCGCTCATGGCATCCTATAATAAAGGAAAGATGCAGCACTCCCTGTGGGTTGTAGAAATCATCA ATTCTAATATTGATGAGTCAACCACTGGTTTGTTAAATGTAGATCCTATGGGTGTATTGCCAAAACATTTGTCATTTCGTAGAATATGGCAGGGAAAAGG TTCTCAAGCAGCTGCTTATAAGGTCTTTATGGCCACAGATGATGATGCAGCTCCTGTTGTTTGCTTTATTCACCAAGAACAAAGAAAGTTGTTGTCTGTC AGGCTTCAGTGTGTTGAAATAAATAACGAGACTGTGTTTGACGTTAAGCCTGATATGAGCTGGACCATAGCTGCACTTGCAGCTTCACCTGTGACAGTAA CTTGCCCTAGGGTCAAAGCTGGGCCACTTCCATATTCAGACATATTGGTTTTGGCTCCGGAAAATGTTCTGCTTCTCTATTCTGGGAAGCAATGCCTGTG TAGATATGTACTACCTTCTTTCTTAAATAAAGATAAGCTTTTGCATGATTTGGAGTTTCCAGAAACATCTTCTCTTTCCAATGATTTAAAGATTACTGGG CTGGCTGATGCTGTTGATGGGCGTGTCAATGTGATAGTAAATTATAGGCAGGTGTTTAGATGTGCATTACAACAAAGTCCTTCATCATTATTAGCTAGTG ATTGCAACACAGCACTTGCTGAGGGGCTTAATTCTAGTTCCTACAGACATTTTCTTGGTCTTCTCTGGAAAGATGGTGACCCTGCTCATTTGTCAGAGTC AGGGTCTAGTGTTGATTCAGAATGGGAGTCTTTTTGTGGTGTAATTATGCAAATCTGTAGAAAATCTAACATATCTCAAAAGCAGTCAGGTTCAGGGTCA CACTCTGCTTGGGACTTCCTTCTCTCTAGTAAATTTCATGATAACTTCTGCAAAGTAAACTCCATGTTTGGAAGATCTTGTGCAGTATTACTTGATCAGC AGGAATCAAATTTCCCTAGATCATCTGTTGTTGACAGACAAAGTTCTGAAAAGCCATTTCATACTGAACTTTTATTAGAATGTTTAGAATCTCTTCATGC ACTTTACGAGAGCCTGAAACTGGATAATCTTCGCAAACGGGACTTAGAGCTTCTAGCAACGCTCTTATGCAATATTGCTCAATTTCTTGGTGAGGGCAAC TACTTGGACCATTATATTCGTGATTTCCCTGGTCTCTATAAAAAGTTTCTGCTGCATGGAACTAGTTTTTCCCATAAAGTTTCTCCAAGTTTATTCAGAT GGCTTGAGAACTGCTTACAACATGGATATGGTTATGCCAATATTAGTGACCTTCCACCTTTAGTCCGCAAAGATGGAAGTTCCGTGGTTAGCTTGGCCCG GAAAATAGTTTCCTTTTATAGTATATTAACTGGTGCTAAATTGCTGGGAAAGAAGCTTTCTTCTGGGGTTTACTGTAACATTGCCATTGGATCACATTCC TTAAATGAGGAACTTACTGTTTTAGCAATGGTTGGTGAAAGGTTCGGACTTCAACAGCTGGACTCACTGCCTTCTGGTGTTTCTCTTCCACTTCGTCATG CAGTAGATAAGTGTCGAGATTCTCCTCCCAATGACTGGCCAGCTGCTGCTTATATCCTTCTTGGTCGACAAGATTTAGCAATGTCAACTTTGGCACGGGA ATGCAAGTATAGGGAAATTCAAACACCATCCAATGTGAATGTAATCTCTATGTCCACACCTTATATGCTAAATCTGCATCCTGTGACAATATCTTCTACT ATCTCTGATGCAATTGGATTGGAAGGAACAAAGTTTGAAGATACAGATTCAGTTGATGGGTCTACGACTGATGGTATGGAGCATATTTTCAACTCTAGCA CACAGTTGCGTTATGGTCGCGATCTGAGGTTGAATGAGGTTAGACGCCTTTTGTGCTCTTCCAGACCTGTGGCAATTCAAACATCTGTTAACCATAGTGC TTCTGATCAGGACCTCCAGCAGGCTCAATTGTGGCACCTTGCACAAAGGACCACTTCACTGCCTCTTGGACGTGGGGCATTTACTCTGGCAACTATATAT ACACTCTTAACTGAGGCCTTTACAGTTCCGAAGCTTGTGTTAGCAGGTAGGTTGCCAGCCCAACAGAATGCAACTGTTAATCTTGACCCCAATATCAGAA ACATACAAGAGCTCAAGTCTTGGCCTGAGTTTCATAATGCTGTTGCTGCTGGACTTAGATTAGCCTCTCTTCAGGGAAGAATGTCGAGAACATGGATAAT TTATAACAAACCTGAGGAGGCAAATTCTGTTCATGCTGGACTTCTCTTTGCTCTAGGATTGCATGGATATTTGCGTGTGCTAGTTATTACTGACATTTAC CAGTATTTAAATCAGGGGCATGAAACTACTACTGTAGGATTAATGCTTGGTCTGGCAGCTTCTTATAGAGGTACTATGCAACCAGCAATATCGAAGTGTC TTTATATTCATATTCCCGGGCGGCATCCATCTTCCTTTCCAGAGATAGAAGTCCCAACCCTAGTACAGTCGGCAGCTTTAATGTCTGTGGGGATTCTATA TGAAGGTTCAGCTCACCCACAAACAATGCATGTTTTATTGGGTGAAATTGGGCGCCGAAGTGGAGGTGATAATGTTCTTGAGCGGGAGGGTCATGCTGTA TCTGCAGGATTTGCACTGGGTCTTGTTGCACTTGGACGAGGGGAAGATACACTTGGTTTTATTGAAACATTAGTGAATCGTCTGTTTCTCTACATCGGCG GAAAAGTTCACACTGAGAGATCTCATTTTTCGACAATCTCAATGGATGAAAATCGTGGTTCTGCACAGATGATGGATGGGACATCAGTTAATATTGATGT CACTGCACCTGGAGCTACCATTGCTCTTGCTTTGATGTTTTTGAAGACAGAATCTGAGGCTATTGTGTCAAGGCTCTCAATTCCAAATACATGTTTTGAT CTGCAATATGTGAGGCCTGACTTCATAATGCTCCGTGTCATTGCTCGAAATTTAATAATGTGGAGCAGAGTTCATCCCTCGAAAGATTGGGTTTTTTCTC AAATTCCTGAAGTTGTAAGATGTGGTGTAGAAGGCCTTGGAGTTGATGGCAATGACATTGATGATATGGATGCTGAGGCTTTTGTACAAGCTTATGTTAA TATAGTAGCTGGAGCTTGTATATCTCTTGGGCTGGTATTTGCTGGCACAAGAAATGGAAATGCACAGGAGTTACTTTATGAATTTGCTGTATACTTTCTT AATGAGATCAAGCCTGTGTCCCCACCTAGTGGAAAGGTTTTTCCAAAGGGACTTTCTCGCTATGTTGATCGGCCCACATTGGAGACATGCCTTCATCTTA TAGTTCTTTCTCTATCTGTGGTTATGGCTGGGTCTGGACATTTACAGACCTTACGATTGTTGAAATTCCTAAGGAGCAGAAATTGTGCAGATGGACAGTC TAGTTATGGCATTCAGATGGCTGTAAGCTTAGCTATTGGCTTCTTGTTTCTTGGTGGTGGAATGCGAACATTTTCCACCAACAACAGTTCCGTTGCTGCT TTGCTCATTACTCTATATCCACGCTTGCCTACTGGTCCAAATGATAACAGATGCCACCTTCAGGCATTTCGCCATTTATATGTCCTTGCAACAGAGGCGC GATGGATTCAGACGGTAGATGTCGACACAGGTCTGCCTGTTTATGCTCCTCTTGAAGTCACAGTCAGAGAAACTGAACATTATGCAGAATCTAGCTTTTG TGAGGTTACCCCTTGCCTTCTGCCAGAGCGAGCTATTTTGAAAAGAATACGTGTTTGTGGGCCTCGCTACTGGCCTCAATTAATAGACTTTGCTCCTGAA GATAAACCATGGTGGAATTTTGAGGACAAGAAGAATCCATTTAATTCTGGTGTTCTTTATATCAAGAGAAAAGTTGGAGCTTGTTCATATGTTGATGATC CCATTGGTTGCCAGTCACTCCTGTCACGGGCTATGCACAAGGTGTTTGGCCTGACAAGTTCGGAAGCATCTGATACAACCACCAATATCCATAGTGGACC TGGTTCTGTTACAGTTGATCAGTTGGTTGGTACCTTCTCATCTGATCCCAGTTTGATTGCTTTTGCACAACTTTGCTGTGACCCCTCCTGGCATAACAGA TCTGATGTTGATTTCAAGGACTTCTGCTTGCAAGTATTATTTGAGTGTGTGAGCAAGGATAGACCAGCTCTTTTACAGGTCTATTTGTCATTATACACTA CAGTTGAAGCAATGGTTAATCAAGTTGGTACTGGTGCCATTGTTTTTGGTGACTCACTTTCTATATCGGGTTTTAAGCTTGGTCTGATTTATATCGAAGC ATTGATGACTGGAAAGTTATGTGCTTCAAAAGGAGGAATCGTGCAATCAACGTTTGTTGGTTCTCTAAGGAAGCAGGTGGAAGAGCTCCTAAATTGTTCC CAGACATTGAAGGATGATTTTCATCAATATTTGAAAATGGGGAAATGGCCTGATGGGGAATCCTCTGATAAACGTTCAATACTTCTTTCTTGGTTCCTTC AGTGGTTTGATGTACCAGCTTCATCTGTAGTCAAAACAACTATCGATAGAGTCAAACCCATGCTCATGTCATCATCTTCAATTCCGTTGTTGCGCCTGTC TTTTCCAAGAACTCATATCAATGCTATTAGCGAGATAGATAAATGTTTATCATGATCATAGGTCACTGGAAGCTTGGTACTTAAGTGTATATGCATTTTG ATCTTACTGAAGTTTTGATTATCCAGTTTTAAGGGTCTTGAGTTGTAGAACTGCTTGCACTGAGAATGCAAAGAGCAAATATTGATGAGCACTAGCTGCA ATTTCCAAATTAAACTTAGTAGTATCTCCTTATTTTTAGTATTCAAATATATTGTGATCACAAGCTGGTTTTGTTTGGCCATTTTTTTAAAGGATCATAA GCTCAGCCATCAGTATCTGTGTCAAAATTAGATGCATTCTAAAGTAATTATTTAATAGCAATTGTT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_31547; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_223228
| Blastp | Anaphase-promoting complex subunit 1 from Arabidopsis with 57.86% of identity |
|---|---|
| Blastx | Anaphase-promoting complex subunit 1 from Arabidopsis with 57.73% of identity |
| Eggnog | Anaphase promoting complex subunit 1(ENOG410XQ83) |
| Kegg | Link to kegg annotations (AT5G05560) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019433711.1) |
| Pfam | Proteasome/cyclosome repeat (PF01851.21) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |