| Id Trinity | FTRINITY_DN53213_c4_g6_i3 |
|---|---|
| Name Transcript | Ll_transcript_163107 |
| Sequence | GAACAATCGATTATATAAAAATCTACGTAACCAGAAAAAAAAAAGTTGAAAAAGAGAAGGAAGTAAGAACACAATAGAGGGCAGAACCAAACTTTGCGAG AAAGAAATCTCTGAAAAGTCATTGATTTCTGCTTCATTGCAAAGATGAACGGAGGCCCATCTGGTTTCACAAATGCTCCTGTCACAAGAGCTTTCATCAT TGCCTCTGCGCTCTTCACAATCTTCTTTAGGATCCAGGGTCGTTTCAACACTCTTGGTTTGTCTTATCAGGATATTTTTGGAAAGTTTCGCATTTGGAAG TTGATTTGGTCCATATTTTCCTTCTGGTCGACACCAGAGTTGATGTTTGGTCTGTATCTTCTATATTATTTCAGGATCTTTGAGAGGCAGATTGGTTCCA ACAAATACTCGGTTTTTGTTGTGTTCTCCATATTAAACTCACTACTATTTGAGTTCCTTGTCATAGGACTCTTAAAAGATCCTACAACAAAGCTAGTCAC TTCTGGACCTTATGGCCTTATATTTGCTTCATTTATACCCTTTTTCTTTGACATTCCAGTTTCAAATCGGTTCCGTGTATTTGGTTTTCACTTCTCTGAC AAGTCATTCGTATATCTAGCAGGTCTTCAGCTTCTTTTGTCATCCTGGAGGAGATCCATCATACCAGGAATATGTGGCATCCTTGCTGGTTCCTTGTACC GTTCGGATGTCTTTTATATCCGCAAAGCAAAGTTCCCAGAATTCATTGCGTCATTCTTTTCACGATTTTCTTTGCCATCTATGGGGAGTGCACGCATAGC ATCCACAAGGAATGTTGCACGGAACGTACCATCCTATCCACCTCGCCAAACAGAGAGAAACTACCCAGCTCCGATGGCCTCTGCGGTAGAACCATCAGAG GACTCAATCGCTACGCTTGTTTCTATGGGATTTGACAGGAACTCTGCCAGACAAGCACTAGTGCAGGCGAGAAATGATGCCAATGTGGCCACAAACATCC TACTAGAGGCACAGTCTCACTGATTCAAAAAATGTTCCATGCATAATGAGAGTAGGATTTTCTGGAATTAATAGATAGAAGGCCAATGATGATGAAGTAC TGGAAATTTGAGAAATTATGATGTGAGGATGTTTTTGAACTTTTGAGGCATTCAAGAAAACATCCTCAAAGGCTTTCTCCTTTTAGGATCTGTTTGCGAG TTGAATTTCGAAGGGGAAGAAAATGGAAGACCTCAGAGTCATCCCAACAATGTATTTGATTTCCTTCTTTTCCCTCCAAAATTTAACTCGTAAATAAGGG ATCATTTTTTCCGACCTTAACTTAGAATCTTTAGAATTCCATTTCAAGACTTTTATTGATAGATGAGTAAGAATTAGGGGCCTGTACAAATAGTAGCACC ATATGGAAAACATGCCTATCATTTTATAAAATATTATGAGCCACATATCTTTCATAGCCGGGTCATAGTTACATGAAGCTTTTCATGTTAAATCTCAATC CCTACCCAGAAAATAATTAAATAAATAATTTTTTTCATTAGAAGAGAAAATAATCGATATTGCAGTCATGCTTGGAGAGGTATTTTTTATTCTGATTTTT CAGATGTCTTATTTTATATAAGAGAATAATTATTTCTTTATTATGAGATAATTTATCTCCTTAAATTCATTTAGTAAAAAA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_31709; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_163107
| Blastp | Rhomboid-like protein 20 from Arabidopsis with 73.04% of identity |
|---|---|
| Blastx | Rhomboid-like protein 20 from Arabidopsis with 73.04% of identity |
| Eggnog | UBA domain containing 2(ENOG4111CBK) |
| Kegg | Link to kegg annotations (AT3G56740) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019447227.1) |
| Pfam | Rhomboid family (PF01694.21) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |