Ll_transcript_163458

• Id Trinity: FTRINITY_DN53215_c5_g1_i5
• Name Transcript: Ll_transcript_163458
• Sequence: CAAACTTTGAAAATTTGTGCCATCATCATTTTTTCCATTCATTTTCACATTCCACCATCTCTCTCCAATTCAATTTCAGCGTTTCACTCCCCTTTTTTCA TTCATTTTTTTATACCTCACTCTTAATTTTCATTCTCAACTTCTCATCCTTTTCTCCAATTTCTTTTTCTTCTTCAAACTTATTTCTCCATCTAGCTACA ATTTCATCATTTACAGTTGGTTGCAATGAAGAACACAGTTTCTATTTAAGACTCCTTCTTTGGATTTGCTATGGAGATAACATAGAAACAAAGCCATGGC TGAGTTGTGAAATCAACGTCAACCAATCTAAGAGATAACGAAGAAACAAAGCCACGACTGAGTCGTGAAGTTAACGTCAACAAATCTAAGACAAATTTTC CAGAATACCAGGGACCTGAGAAGATTGTCATCCGGCGATACAGTGACTTCATTTGGTTACGTGATCGCCTCTTTGAGAAGTACAAAGGAATTTTCATTCC CCCTCTTCCAGAGAAGAGTGCTGTAGAGAAATTTCGTTTCAGTGCTGAGTTTATCGAGATGAGGCGTCTAGCATTGGATATATTTGTAAATAGGATAGCC TCTCATCACGAACTTCAACAAAGTGAGGACCTGAGGCTATTTTTGCAGGCTGAAGAAGAGACAATGGAGAGATTAAGGTCCCACGAGAATGGCATATTCA AGAAGAAGCCATCTGATTTTATGCAGATTTTTAAGGATGTTCAATCGAAAGTGAGTGATGTTGTCCTTGGGAAAGAGAAGCCAGTGGAAGAATCTGATCC TGAATATGAAAAGATGAAACATTACATCTTTGAGCTTGAGAACCACTTGGCTGAAGCTCAAAAGCATGCTTATCGCCTTGTGAAGAGGCACAGAGAGTTG GGACAGTCACTGTCAGATTTTGGGAAAGCAGTAAAACTTCTAGGTGCTACTGAAGGAAATTCTCTCGGGAAAGCATTCTCTGAACTTGGGATGAAATCAG AGGCTTTATCAGTCAAGCTGCAAAATGAGGCCCAGCAGCTCTTGGTTAATTTCGAAGAACCTTTGAAAGATTACGTCCGTGCTGTGCAATCTATTAAGGC AACAATAGCAGAGAGGGCCAATGCCTTCCGGAGACATTGTGAACTGTCTGAAACAATGAAGCTGAAGGAGATTAATCTTGACAAACTCATGCTAATTCGG TCTGATAAAGTTGGGGAAGCTGAGTATGAATATAATCAGTTGAAGGCAGAGAGTGAACAAGCAACAAAGACATTTGAGACGATTGTGAGATTAATGAATG AAGAAATCGGGCGTTTTCAGGAACAGAAAACAATAGATATGGGGATTGCGTTCCATGAATTTGCCAAAGGTCAGGCACGGCTAGCAAATGGCATTGCCGA TGCATGGCGAAGTTTGATTCCGAAACTGGAAGCATGTTCACCCTCCCACAGAATTAATCAATGAGAGCTAGAGAGCAAAGATGAAGTACTCCTCCATGAG TGGTTACAATGACTAGAGTATGGCAGACGCAGCTCTTGTTTTGTAGAAGGGCTTACGGAGTTACCTGCTATTTTGAATTATGTTGTAAAAGATGTGATTT TCTTGCAACTTGATTTTGTACAAATTTTAAACAAAGTAAAAAGGTACATCTTTGAAATGTCATCTTTTAGAACATCACTTCCTCTTTTACATTTCCATTT TCCTGGTCTGTATACTTGTAGTTCACAAGAATAAAAGTGGATTGAACTATTCCAAAAGGGGATTTTCTTTAAAGTGAAGGTATATTTTATCTATCTATTA AAACAAACCATGCATTGGCTTATT
• Tissue: flowers
• Gene name: LI_gene_31718;
• Additional information: details;

Expression of Ll_transcript_163458

FPKM

• FPAB: 13.1
• FPNAB: 16
• LF1: 12.1
• LF2: 11.8
• LF3: 12.8
• LF4: 11.7
• UF1: 16
• UF2: 9.6
• UF3: 9
• UF4: 11.2

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_163458

• Blastp: Sorting nexin 1 from Arabidopsis with 78.5% of identity
• Blastx: Sorting nexin 1 from Arabidopsis with 81.2% of identity
• Eggnog: sorting nexin(COG5391)
• Kegg: Link to kegg annotations (AT5G06140)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019428711.1)
• Pfam: Vps5 C terminal like (PF09325.9)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;