| Id Trinity | FTRINITY_DN53215_c5_g1_i8 |
|---|---|
| Name Transcript | Ll_transcript_163461 |
| Sequence | CTTTTTTATTTATTTAATATAACATATTTAACAAAATCTCATTTGTTAACAACTCTACATCAACAATCAAATGCAGAAACATCATTTTTTCATAAAGTAC CTCTCAGTAACATTTTTTTTAACAAATTATACTTTCAATTTATAAATAAATTCATGCAAAATACATTTTCACCCGTGCGAATGCACAAGTATCCTACTAG TTATTATATAGACCAAATTACTACCAAATTACTGCCTACACATGTCTTAAGTGAGTTGTGACCTGTCTGCATAACAATCTTAAAAAATATATTTTTTAAA CTGAGTTTTATACTGCTGTTATTAGGGTAAGTTTGTTTAAAGAATCAATTAAAACCAGTTTTTAAGAGGAGAAAGAACCTTCAAAAGCTGTTTAATATCT AGTCTTTCGCTAATGTTATTGTCCTACTTTTTGTATCACTTCATATCAATTTTAATTAGTTAAAAAATTATTTAAATTAAAATTATAATATCAAATATTT TTCTGATCTATTATACTCTTTGAGAGACAAATAATATTGTAAGAAAATAAATGTACTCCGCTATTTTACAAGAGTAGATGACCCCAAAAGTAACACGTCA ATGTTAGAAGCTCATTGGTTAAAAGGTCGAGAAAGGCAATTAACAAACAACTACTGTGTTAGTTTATTTTTTAATAAAAAATGAAATAATCTCCCATTAC TTTATATATTATTTTTTTAATAAAAAACGGAAGTAACATATATAATAACACAATACTTTATATATTAATAATTTATTTATAAGTGAGATGTAATATTTTG TTGTGTAGAGCAGAATTAGTAGAAAAAATAGTAGTATTATTATTTTTTAACTATTCTGAGAAATAAATATTTTGTATATCAACTAATTTCTGATAAACTC ATATCCAATTAATTCCAAAACCCAAGTTATAACTTATAACCTTCCAAAATCGGAGCTCCACACTCTCTCTCTCTTCATAAGACACGTTCACTCCGATGCA ACACTCTTTCTTCAACACCACATCCCATACCATGAATCCCTCGCAGAGAAGTCTCTCCGGTTCGTTGCAGAGTCCTAGATCTCCGTCTTCGTCGCAACCG TTTCTTTCCGTCTCCGTCACCGATCCGGTTAAACTCGGAAATGGCGTCCAAGCCTATATCTCTTACCGCGTCATCACCAAAACAAATTTTCCAGAATACC AGGGACCTGAGAAGATTGTCATCCGGCGATACAGTGACTTCATTTGGTTACGTGATCGCCTCTTTGAGAAGTACAAAGGAATTTTCATTCCCCCTCTTCC AGAGAAGAGTGCTGTAGAGAAATTTCGTTTCAGTGCTGAGTTTATCGAGATGAGGCGTCTAGCATTGGATATATTTGTAAATAGGATAGCCTCTCATCAC GAACTTCAACAAAGTGAGGACCTGAGGCTATTTTTGCAGGCTGAAGAAGAGACAATGGAGAGATTAAGGTCCCACGAGAATGGCATATTCAAGAAGAAGC CATCTGATTTTATGCAGATTTTTAAGGATGTTCAATCGAAAGTGAGTGATGTTGTCCTTGGGAAAGAGAAGCCAGTGGAAGAATCTGATCCTGAATATGA AAAGATGAAACATTACATCTTTGAGCTTGAGAACCACTTGGCTGAAGCTCAAAAGCATGCTTATCGCCTTGTGAAGAGGCACAGAGAGTTGGGACAGTCA CTGTCAGATTTTGGGAAAGCAGTAAAACTTCTAGGTGCTACTGAAGGAAATTCTCTCGGGAAAGCATTCTCTGAACTTGGGATGAAATCAGAGGCTTTAT CAGTCAAGCTGCAAAATGAGGTAAGTTTTGCTTGCTCGATGGTATATACATGGTATTGAGGAGTGAAAACGAGAATCCGAGTATGACTCTGTTATGCAGG CCCAGCAGCTCTTGGTTAATTTCGAAGAACCTTTGAAAGATTACGTCCGTGCTGTGCAATCTATTAAGGCAACAATAGCAGAGAGGGCC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_31718; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_163461
| Blastp | Sorting nexin 1 from Arabidopsis with 83.78% of identity |
|---|---|
| Blastx | Sorting nexin 1 from Arabidopsis with 84.75% of identity |
| Eggnog | sorting nexin(COG5391) |
| Kegg | Link to kegg annotations (AT5G06140) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019428711.1) |
| Pfam | PX domain (PF00787.23) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |