Ll_transcript_163517

• Id Trinity: FTRINITY_DN53221_c0_g1_i4
• Name Transcript: Ll_transcript_163517
• Sequence: TTCTTCACAAGGTTATATAATTCTATTTTACTAAGTTTTTGGGAGAAAAAAATTGTTTTGTTTAATTGTTGAGGAAAAAAAAATAGAGAAGTGAGATAGG GCAATTGTTGATACCCTGAGGCGTGAGTATAAAACCCTAATCCAACAATCAAGTTTTCCTCTCTCTTCCTCCCAGACGGCAACGCCCTCTTCCTTTCGTA CTCGTTTCTTCTTCCTCTTTTTTTATCGGTAAAGTTTTCATTTTTCTTCTCTCTTTTCTATCTCTTCCTTCCTTTCTTCCCAATATCATCATACCCTTTT GTTTTCACCCCATTCAATCATGTTTTACTTTCATTCTTTACTCTTATGTTGCTTGCTACACCTAGATTTCAATGGGTTTCTGCCAAAATTCGATCTTTGG GTATTTGTATTTGAAACCCTTGAGATTATAGCTAATAGCTTGAGTGAGAGTGACCCTTTTGGTTTGTTTCGTTTAGGGTTTTTTCTTTATTTATTGTGTT ATCTGATTTTTATGCTAATGATTATGTGATTGGATCCGTAATATTTTTAATTTATTTAAGCTATTTCATGTTTTTTTATCGTTTATAATTTATTGTTCTC CCATGTTATTTAGCTTGATGATTGAATTTCCTTGTGCTAGTGTTGTGGTGTATATGAAAATGAAACTGACAAAACTAGGTTTGTTTCCTTTGAGATTGTT AGGTCATCTAAATTAGTCTCTTTTTTCTCACCTCTGAATGTTTTTAGGGTTTTGGTTTTCATACTTCTGAATTTTTTTATTCTTTATGGGTTTTATATGA AATAATGAATCATTGTTGCTAGATGATGTTAATTGTACTTAACCTATTACTCATAATGAAATGTTTGTCTCTCTCTTTAACATGATGGTTTAGCAGTATG ATATATTACATTCATGGTGGAATGGTATGCCATTCACTTATTGATTTTTTTCTTCTTTGAAGTGTAGGTTCAAGTTAATAAGGAGTTAACTTTTTGGGGG AGTTATTGAGTTGAAGAGAAGCTGTTTTTTACAATATTAAGTTAAGTCATATTTCGTGGTTCTGCCGGAAACTGTTATGGCTGTACATATCAAATACCGT CTTATTACATACTCTCAAGAGCTTGTGGATGGGCAGCCTATTTTTGTTTCTTCCAACTGTCTTCCTGTCAAGGCTTTGAAACTTGAACCTGCAGGCCATT CTTACCATTCTGCTGCTCTTAAACTTCTTGGTGTTGAGGAAGATAATGGAGGTGATGCTGATAATAAAAAGGTGGTTGATGAAAAGGAAAGCAGTTATCT CCCTTCATTTGATTCTTATAGTGGCAAGAGCAAGAAGAAATCTGGTTCTGGAGACAAGCAGCAAGATCACTATGCATTGTTGGGCCTTGGTCATTTAAGA TATCTTGCTACGGAGGATCAAATACGTAAAAGCTATCGTGAAACTGCTTTGAGGTTTCACCCTGACAAACAGGCTGCTCTTATTCTTGCCGAGGAAACTG AAGCTGCAAAGCAGACAAAGAAGGATGAGATCGAAACTCACTTTAAGGCAATCCAGGAATCATATGAGGTGTTGATTGATCCCGTGAAGAGAAGAATTTA CGATTCCACAGATGAGTTTGATGATGAGACTCCAACTGACTGTGCTCCACACGACTTCTTCAAGGTGTTTGGGCCTGCGTTTATGAGGAATGGGCGGTGG TCAGTTACTCAGCCAATTCCAACACTGGGTGATGAGAATACACCATTGACAGAAGTTGATAACTTCTACAATTTTTGGTACTCCTTTAAAAGCTGGAGGG AGTTTCCTCATGATGATGAGTTTGATCTTGAGCAAGCTGAATCTCGAGACCATAAGAGGTGGATGGAAAGGCAGAATGCAAAGCTGTCAGAAAAAGCTAG GAAGGAAGAAACTGTCCGGATACGTGTTCTTGTTGATAATGCTTATAAGAGAGATCCAAGAATACTGAGAAGAAAGGAAGAGGAAAAGGCTGCGAAGCAA AAGAAAAAGCAGGCTAAGCACCTAGCAAAGAAGTTACAGGAAGAAGAAGCAGCCAGAATTGCAGAAGAGGAGAGGCGACAAAAAGAGGAGGAGGATAAAA AGGCTGCAGAAGTTGCTTCGCAATTGAAGAAGGTGAAGGAGAAAGAGAAAAAGCTACTGCGAAAGGAACGTGCACGTCTTCGAACTCTTTCAGGGCCTGT TTTGCCACAGCATTTACTTGAAATTTCTGAGGATGATGTTGAAAAGCTTTGCATGTCACTTGCTATTGACCAGCTGAGGGGTTTGTGTGACAAAATGGAA GGCAAACCGGTCATGGAGCAAGCAGAAGTTCTGAAAAATGCACTGGGTGGTGACAAGGGTGTGGTCAAAGAAGATAATAATGATCCGAAACCTACTATTC AACAAAATGGTTCTGTCAAGTCTAAAGGCAGTGCTTCTTTGCTAAGCAACTTCGAGAAGAAGGAGAAACCATGGAGTAAAGAAGAGATTGAGCTACTGAG GAAAGGAATGCTGAAATATCCTAAAGGAACTTCACGGAGATGGGAGGTTATTTCAGAGTACATTGGTACAGGAAGATCCGTGGAAGAAATTATGAAGGCA ACTAAAACAGTTCTCCTCCAAAAGCCTGATTCTGCTAAAGCTTTTGATGCATTCCTCGAGAAAAGAAAGCCGGCTGCAGAGATTGCATCTCCTTTGACAA CCAGAGATGAACTACTAGGGGCATCAACTGCTGCGCAGCCTGAAAACAGCGGCCCTCCTGCTGCGACAACAAATAACTCGGAAGACTCTCAGAGCAACAA AAGTACTGATACTCAGAACTCTCCTGGTGCTCCTGTTACTGCAAATGGAGTTTCTTCTACTTCAACAGAACAAGACGAGTGGTCTGCCATACACGAGAGA GCATTGGTTAAAGCTTTGAAAACCTTCCCAAAGGAAACTAGCCAAAGATGGGAGCGCGTTGCAGCAGCTGTTCCCGGTAAGACTGTGAGTCAGTGCAAGA AGAAATTTGCCTCGATGAAGGAGAGTTTCAGGAACAAGAAATGTGCAGTTTAATCTGCAATGAAACAATTGAAGAATCTTCAGAGTCACAGTGATGAGTT AGTATTGGTTCCCTATTTGTGGAGTAGTTTCATGCTGTTTTTTAGATTCTATATCTAAATTTTTTGAAGAGTTGGAACCTCCATAGTATAGGTTACTTTC AAGTACCTTCATATCCCATAGCAGTAGTTGCTTCAATCTGATAGATGGTTAATTTACTCAATTTCAATTTTTATTTCCAATATTTTGCTTAACAATTTTT GCAGCAATGAAAACATTTATTTGTATGAGTATGAGAGAGCAAGCATGGTTGTAGATCAAGACTGATTGTGGTCTCCATTTATATTTATCATTTTAAAAGA TAGTAGTGATCTTCTTTCGTATTTTTCCGAAGCAGAAACTGCTTTATTATATTTTTATAGTTTGGTTCAAG
• Tissue: flowers
• Gene name: LI_gene_31742;
• Additional information: details;

Expression of Ll_transcript_163517

FPKM

• FPAB: 0.6
• FPNAB: 0.2
• LF1: 0.4
• LF2: 0.3
• LF3: 0.2
• LF4: 0.2
• UF1: 0.3
• UF2: 0.2
• UF3: 0.3
• UF4: 0.2

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_163517

• Blastp: DnaJ homolog subfamily C member 2 from Rattus with 34.57% of identity
• Blastx: DnaJ homolog subfamily C member 2 from Bos with 47.26% of identity
• Eggnog: Transcription factor(COG5269)
• Kegg: Link to kegg annotations (116456)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019425794.1)
• Pfam: DnaJ domain (PF00226.30)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;