| Id Trinity | FTRINITY_DN53221_c0_g1_i6 |
|---|---|
| Name Transcript | Ll_transcript_163521 |
| Sequence | TTCTTCACAAGGTTATATAATTCTATTTTACTAAGTTTTTGGGAGAAAAAAATTGTTTTGTTTAATTGTTGAGGAAAAAAAAATAGAGAAGTGAGATAGG GCAATTGTTGATACCCTGAGGCGTGAGTATAAAACCCTAATCCAACAATCAAGTTTTCCTCTCTCTTCCTCCCAGACGGCAACGCCCTCTTCCTTTCGTA CTCGTTTCTTCTTCCTCTTTTTTTATCGGTTCAAGTTAATAAGGAGTTAACTTTTTGGGGGAGTTATTGAGTTGAAGAGAAGCTGTTTTTTACAATATTA AGTTAAGTCATATTTCGTGGTTCTGCCGGAAACTGTTATGGCTGTACATATCAAATACCGTCTTATTACATACTCTCAAGAGCTTGTGGATGGGCAGCCT ATTTTTGTTTCTTCCAACTGTCTTCCTGTCAAGGCTTTGAAACTTGAACCTGCAGGCCATTCTTACCATTCTGCTGCTCTTAAACTTCTTGGTGTTGAGG AAGATAATGGAGGTGATGCTGATAATAAAAAGGTGGTTGATGAAAAGGAAAGCAGTTATCTCCCTTCATTTGATTCTTATAGTGGCAAGAGCAAGAAGAA ATCTGGTTCTGGAGACAAGCAGCAAGATCACTATGCATTGTTGGGCCTTGGTCATTTAAGATATCTTGCTACGGAGGATCAAATACGTAAAAGCTATCGT GAAACTGCTTTGAGGTTTCACCCTGACAAACAGGCTGCTCTTATTCTTGCCGAGGAAACTGAAGCTGCAAAGCAGACAAAGAAGGATGAGATCGAAACTC ACTTTAAGGCAATCCAGGAATCATATGAGGTGTTGATTGATCCCGTGAAGAGAAGAATTTACGATTCCACAGATGAGTTTGATGATGAGACTCCAACTGA CTGTGCTCCACACGACTTCTTCAAGGTGTTTGGGCCTGCGTTTATGAGGAATGGGCGGTGGTCAGTTACTCAGCCAATTCCAACACTGGGTGATGAGAAT ACACCATTGACAGAAGTTGATAACTTCTACAATTTTTGGTACTCCTTTAAAAGCTGGAGGGAGTTTCCTCATGATGATGAGTTTGATCTTGAGCAAGCTG AATCTCGAGACCATAAGAGGTGGATGGAAAGGCAGAATGCAAAGCTGTCAGAAAAAGCTAGGAAGGAAGAAACTGTCCGGATACGTGTTCTTGTTGATAA TGCTTATAAGAGAGATCCAAGAATACTGAGAAGAAAGGAAGAGGAAAAGGCTGCGAAGCAAAAGAAAAAGCAGGCTAAGCACCTAGCAAAGAAGTTACAG GAAGAAGAAGCAGCCAGAATTGCAGAAGAGGAGAGGCGACAAAAAGAGGAGGAGGATAAAAAGGCTGCAGAAGTTGCTTCGCAATTGAAGAAGGTGAAGG AGAAAGAGAAAAAGCTACTGCGAAAGGAACGTGCACGTCTTCGAACTCTTTCAGGGCCTGTTTTGCCACAGCATTTACTTGAAATTTCTGAGGATGATGT TGAAAAGCTTTGCATGTCACTTGCTATTGACCAGCTGAGGGGTTTGTGTGACAAAATGGAAGGCAAACCGGTCATGGAGCAAGCAGAAGTTCTGAAAAAT GCACTGGGTGGTGACAAGGGTGTGGTCAAAGAAGATAATAATGATCCGAAACCTACTATTCAACAAAATGGTTCTGTCAAGTCTAAAGGCAGTGCTTCTT TGCTAAGCAACTTCGAGAAGAAGGAGAAACCATGGAGTAAAGAAGAGATTGAGCTACTGAGGAAAGGAATGCTGAAATATCCTAAAGGAACTTCACGGAG ATGGGAGGTTATTTCAGAGTACATTGGTACAGGAAGATCCGTGGAAGAAATTATGAAGGCAACTAAAACAGTTCTCCTCCAAAAGCCTGATTCTGCTAAA GCTTTTGATGCATTCCTCGAGAAAAGAAAGCCGGCTGCAGAGATTGCATCTCCTTTGACAACCAGAGATGAACTACTAGGGGCATCAACTGCTGCGCAGC CTGAAAACAGCGGCCCTCCTGCTGCGACAACAAATAACTCGGAAGACTCTCAGAGCAACAAAAGTACTGATACTCAGAACTCTCCTGGTGCTCCTGTTAC TGCAAATGGAGTTTCTTCTACTTCAACAGAACAAGACGAGTGGTCTGCCATACACGAGAGAGCATTGGTTAAAGCTTTGAAAACCTTCCCAAAGGAAACT AGCCAAAGATGGGAGCGCGTTGCAGCAGCTGTTCCCGGTAAGACTGTGAGTCAGTGCAAGAAGAAATTTGCCTCGATGAAGGAGAGTTTCAGGAACAAGA AATGTGCAGTTTAATCTGCAATGAAACAATTGAAGAATCTTCAGAGTCACAGTGATGAGTTAGTATTGGTTCCCTATTTGTGGAGTAGTTTCATGCTGTT TTTTAGATTCTATATCTAAATTTTTTGAAGAGTTGGAACCTCCATAGTATAGGTTACTTTCAAGTACCTTCATATCCCATAGCAGTAGTTGCTTCAATCT GATAGATGGTTAATTTACTCAATTTCAATTTTTATTTCCAATATTTTGCTTAACAATTTTTGCAGCAATGAAAACATTTATTTGTATGAGTATGAGAGAG CAAGCATGGTTGTAGATCAAGACTGATTGTGGTCTCCATTTATATTTATCATTTTAAAAGATAGTAGTGATCTTCTTTCGTATTTTTCCGAAGCAGAAAC TGCTTTATTATATTTTTATAGTTTGGTTCAAG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_31742; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_163521
| Blastp | DnaJ homolog subfamily C member 2 from Rattus with 34.57% of identity |
|---|---|
| Blastx | DnaJ homolog subfamily C member 2 from Bos with 47.26% of identity |
| Eggnog | Transcription factor(COG5269) |
| Kegg | Link to kegg annotations (116456) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019425794.1) |
| Pfam | DnaJ domain (PF00226.30) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |