| Id Trinity | FTRINITY_DN53222_c5_g3_i8 |
|---|---|
| Name Transcript | Ll_transcript_164427 |
| Sequence | CGAACATGCTGAAGTGTTAGAAATTACAGTATAAAAGTTGAAGGATGAACTAGAAGAATGCTTCCATAGATTGCCCTGTCCTAACTTGATCTGCAATTAA TTATATCGCGATTAGGTATATTTAGTGGCATAACATTTAACTGTTTTTCGTTATTATTGTGGATGAAAAAGAATTGGGGCATGTCATTGAACAATAATGA AGACAGCAAAAACTATAGTTGACTTTGTTATTTTGTGTTGTAATGGGACACATAATCGCAATATTAAAATCAGTGACTGACTCCATTGTAACATAATTAA GTATTTGAAAATATGACCGACTTGCTTATTTAGTCGTTGTTTTTCCTGTTGGCCCACGTGTTTGTATAACGTGATGTTCATTATTGCAACGTGTATGAAG ATGTGAGTCTGAATCTGTACGCTGTTGAAACTTCAAGTCAGAGCTCAAAGGCAAAACCTTTCTTTCTCCCTTTATGCCACCAACTTTTCAGTATCTCTTA TCAATTTTGTTTACTTATGACGATTTCTTCCTTTTTCATCAGAGCCTCTAGGTCTCTCAATACTTCCAACTTTCTGCTTCTTTGCACCCTCAGTGGTGGA GGTGTGGTGGCATACTCAGAATTACAATCAGAAACTCAACATCCTACTATTGTTGCTACTGAGCCCCGAAAAAAGAAAGTGGTGGTTCTTGGAACAGGAT GGGCTGGTACCAGTTTCCTTAAGGGTCTGGATGCTTCGTTATATGACGTTCAGGTTGTTTCACCTCGTAACTACTTTGCATTTACTCCCTTACTACCCAG TGTAACTTGTGGAACAGTTGAAGCACGGAGCATTGTAGAGCCAGTCCGGAACATCATAAAAAAGAGAAAAGGAGAAATAAAATTTTGGGAGGCAGAATGT GTCAAGATTGATGCTGCAAACAAAAAGGTGTTTTGCCGGTCTAATATTAAACACTTAGTGGGAAGTGGTGACTTTTCTTTGGAGTATGACTTCTTGGTTG TAGCGGCAGGAGCACAAGTAAATACTTTTAACACCCCTGGTGTCAAGGAGAACTGTTATTTTCTGAAGGATGTCGAGGATGCTCAGAAAATTAGATTGTC TGTGATAGATTGCTTTGAGAAAGCTGTTCTTCCTAGTCTATCTGAAGAAGAGCGAAGGTCAAATCTTCATTTTATAGTTGTTGGAGGAGGTCCAACTGGT GTGGAATTTGCTGCAGAACTGCATGATTATGTCCTGGAAGATTTAATCAAATTATATCCTACTGTCAAAGATATAGTGAAGATAACATTGATTCAATCAG GAGATCATATCTTGAACACGTTTGATGAAAGAATAAGTTCATTTGCGGAGCAGAAGTTTGGAAGAGACGGTATAGAAGTTCAAACAGGAAGCCGTGTTGT CAATGTTAGTGACAAGGAAATTACAGTGAAGGCGAAATCAACAGGAGAGTTTTGCTCTGTGCCCCATGGATTGGTTGTTTGGTCCACTGGCATTGCAACT CTTCCATTTGTGCGAGACTTTATGGAAGAAATTGGTCAGGCCAAAAATCGTGTACTAGCAGCTGATGAATGGTTGCGAGTGAAGGGATGTGAAGCTGTGT ATGCCCTTGGTGATTGTTGTACAATAAATCAACGTAAAATCATGGATGACATCTCAGACATATTTAAGGCTGCGGACAAAAATAATTCCGGCATCTTAAC TATTGAAGAATTCAAGGATGTGATGGGTGATGTCGTCTTAAGATATCCGCAAGTTGAACTTTATCTAAAGAAAGAACATCTGCTTGATTTGACCACTCTG TTGAAAGATTCACAAGGAAACCAAAGAAAAGAAATAGACATAGAAGGGTTTAAGCAGGCCCTTTCTAATGTGGATTCACAGGTGAAGGTTCTGCCAGCGA CTGCACAGGTTGCTGCCCAACAAGGTGAATATCTTGCAAGATGCTTTAACCGCATGGATAAATGTGAAGATCACCCTGAAGGTCCTCGACGATTTAGAGG ACCTGGACATCATCAGTTTCGACCATTCCAGTAAACCATATACTTTTTTATGCTCATATTTTATGTTTTCTATAGTTCCTGTCTGCTGAGTGAATATTGG AAAAGTGTGGTCTATCTAAATCAGACACCCAAGGGAACCTGGTTAATTGTTATGATTGCTTCAAATTTGAAAGCAGTTGATAAGGAAAACTTGGATACAC TGCAGAAGTGCACACATAGGTAACAAATTTGATGTACATTTAAGCGAACTGTGCACAAAATAAATAAGCTACTATTCTTCAGAAAGTGCATCTTTTAGTG GATTGTAAGGTAAATTCTGATAATTATTTAGGTTGGAGTTCCATGCTTCAACTTCCCCCCAGAGGATTTTTTTCAACTGCTGGAGATGATTTTTTTTTGG TAGAAACCAAGTTCCTATGATGAGTTTCTGAATTTAAGTTCTGTCACATATCAGACCTATTGCTCAATCAAGATAATTAATGTCATTCTATGTTAAAATA GCTTTGAAAAGATAGAATATTTGACCCATTTAGAGATTAGAGGTATGTTTGGGAGTTTCATTATGGAGGGAAGGAAATGGAAGGTTTAGTTTATCAATTT AAGAATGATTTGGATAAATTATACAAGGGGGTTTATTTTGTGATGAGTTATGAAGAGGGCATCACAGTAATGGGTATGATTCAAACTTAAAATACTAGTT TTTATGAGCACCAAAAACCTTATCATGAGTGAAATGATGTTTTGAGAACCATTTGGATTAGTTTTTGCTTTAATCAAGTACTTAATTGCTTATCTTGATT TCCTACCTTTAGCTAGGTTAATCCATAACTAATCATTAAGTTGGTGATTACTTATTATCAAAGGTATAAGCATTTTGGACAATTTGCTCCTTTGGGTGGG GAGCAGGCAGCAGCAGAACTTCCTGGAGACTGGGTTTCCATGGGTCATAGCACTCAATGGCTTTGGTATTCTGTATATGCAAGCAAGCAAGTGAGCTGGC GCACAAGGGTGTTGGTTATATCTGATTGGACAAGAAGATTCATCTTTGGGAGGGATTCAAGTGGTGTTTAATGTGAATAGCAAACAACGTCTTAATTATT TTGTGGAACTTTGTCCCTGTTCATTCTTATACCTATTAAGGTACAACATGTTTGTCCACTTTCAATTGCAAAAAACACTTGGAGAATTGTCATGTATTTT TGGTTGAGAATGCTTCTGTTTGCAGCTTCCATTTTGTGTCAGAATATATATACTTTGGGTGGGTTAATGTAATCCTGTCTTGGATACAGTTTCCTAAATG CCCAACCACATTCAGCTCAAAATAAAATGTCATGCTGATATAAACACATTGAAACACAATTATGATTCTCTCGTCATGGTTCTTTTGTGAACCGTGGTTT CCTTTATGACCCAACTCAACTCTTATCTACAAGTAAAAGATAA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_31753; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_164427
| Blastp | External alternative NAD(P)H-ubiquinone oxidoreductase B1, mitochondrial from Solanum with 70.33% of identity |
|---|---|
| Blastx | External alternative NAD(P)H-ubiquinone oxidoreductase B1, mitochondrial from Solanum with 70.33% of identity |
| Eggnog | Nadh dehydrogenase(COG1252) |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019448973.1) |
| Pfam | Pyridine nucleotide-disulphide oxidoreductase (PF07992.13) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |