| Id Trinity | FTRINITY_DN53245_c0_g2_i8 |
|---|---|
| Name Transcript | Ll_transcript_163396 |
| Sequence | AAGAAAGTTCCAGATTTGGCAGAAAATTTTATCAATCCTGCTACTGCCTTACTCAGGGAGAAGCATCATGGAGTTTTGATCACTGGCGTTCAGCTTTGTA CAGAACTGTGTAAAATTAGCACAGAAGCTCTTGAGCATATTAGAAAGAAGTGCACAGATGGTTTGGTCAGAACTCTTAGGGATCTAACCAACAGTCCGTA TTCACCAGAATATGATATTGCTGGTATTACAGACCCTTTTCTCCATATCAAACTGCTTAAACTCTTGCGAGTGTTGGGTGAAGGTGATGTTGATGCTAGT GACTCTATGAATGACATACTTGCCCAGGTGGCTACGAAGACTGAGTCGAATAAAGTTGCAGGGAATGCCATTTTGTACGAGTGTGTTCAAACAATAATGA GCATTGAAGATAATGGTGGCTTACGTGTGCTTGCTATCAATATCCTGGGAAGGTTCTTGTCAAACCGTGACAACAATATCAGATATGTGGCGTTAAACAT GCTGATGCGGGCTGTTACTATTGACACTCAGGCAGTGCAGAGGCATCGTGCAACAATTCTGGAATGTGTAAAGGTATTAATTCTGTGGCCTTTGTCCTTC TCTCTTATTCAATAACATTGAAGAATATAGGGTAAGGAAGAATTTGAAGATAGATTTTGACTGCTACTTTTTAAGATGAGAAATTCGATTGGTAAGATAA CCTCATACAAAACACAATCAAAATACCCCTATTTATACTAATAGTTAGGTACTTAGGTCAAGTGCTAACCCCACTAGTACCACACAAAACCCACGAAGAA TAAGATAACCTAATAATTAATGTCCATTCTATTATCTAACACTCCCCAAGCTTAAGCTTCCTATACTTAAGCTTGTTAGAAGTAGCAAACCCATCAACTG AAAACACAGAACACCACCGATATTTAAAATCCAGCCGAGTATGAGACCAATACCACCCAGCAAAGTCTTCAAAACAGAGTCGAGTACAATGCGGCAATAC CACCCAGCAAAGACCTCCAATTAGGTCTCCAAAACATTCAGTTGAGTATGAGACCAACCAGCAATACATTTATTTTCTATATAAAATAGGCTCGAACTGG GTCTCTAAAACATTGATTCAGCCACTCAGTGTTCATAACACCTAACAATGAATTTAAGGGAGACTCGTGGCTATGGCTACTCCAAAATTTTAGAATCAAC TTTACAGTAAACGTTTTTATGGAAAATATAAATTCTTTAACCGAGAGCCCCTTAATTAAAGTGCGGATTAATTGTAATGCACTGTCGATAAAAATATATT TTCAACTATCAACCAATCATGCATTGTTGTATTATTAAGAATGTTTGACTCTTGAAATAACTACAGGACAATAAGAAGGTATTTCAAACTCTTGAAGGAT ATAAAATAATTTTTTGGGAACCAAAATCAAAATCGCTATACTTTATAAGGATTAAAAATATATTTAAGCCATGTTAGACTAATAAAGTATTGTTTTTATT TGGCTACCTCATTTAAAACCCTCTAGCTTCGCCTCTAAATGACCTCCAACCGGGTCTCTGATATCATTTCTGACATTATTACAAATGGGGTCCTTCAGTA ATGTCCAATGTTTTTCAATCCACAAACCCTTGACAACAAAGCAAAGAAAGGACAAAAAATAATCTCTAAATGACATAAATTGCACAAAATTATTCCAAAG CCTGATTCAGAATTAATCATAGGCAGACTAGCAACCAAATTAGACAGAACTACAATCAACAATTACACTGTTTCCACCAGCCAAATGCTGTCACACCATC TACATGAACTTATCAACTATATCACTCCAGTTGCAGCCAAATTTGCGACCATCAGCCTCCCAAATGCAGTCAGCAATGATGATCTTCATCGTTCTGACCA CTCAGAAGAGAATTTTAAACCACGGGATGATGCTGAACTATCCAAGCGATGCTGAAATTGGGAATTTCCTGCTTCCAAAGTTGCTACTCCATCACCAGTG AGAATCTAAGGTGGCTCCACATTGACAGCGGCTTGCATCCAATTGGGGAGCCCTTGCTTCGAACTCAAAGTGCACCAAGAAAGTCACAAGAAGAAAAGAG GACCAAGGTAGGACAACGGCTTAAGCCTCAAAACGTATTCATAACCTTCTTTAAAAATATGAGTGACATGGCCAGTCATCATGCCAACATAGAGGTGCAA TACAATATATAGGATCTGCATCTTCTGAATCTATGGGCATAAAATAAATCCTGCAACTAACATCATATAATTCTGCCATCTTGAACAACTCTTAGAATGT TATCCTTCAAAATTTCCGAAATCAGAAACCAAGACCCACTTATCAGTCAGCACATCAGCAACCAAAGAGTCGAGAAAACACCAAATAACACTTTCAGGTC TCAATAAAACTAAAGGAGTGCAAACATTGGCACTGGACTCAAAGGAAATGACCCCAAAAATGCTGAAAACTCACCTATACCGGCTTAAACTGCAATGATG GAGAAAGCTGAGTGGTATTAACACCACTAGTACCAGTCCAAGTCCAAGTCCATTAACTGAAGACAAATAACATAATAAGTAATAATCGTACTATTCTTAA GCAAAGGAGTAAGGACAATGAGTTTATTTTACAACTTAAGAAGTTAGTGACTTGACTTTTTGGTTCAGGACCCTGATGCTTCAATTCGGAAAAGAGCCCT TGAACTTGTTTATGTTCTGTTGAATGAAACTAATGTGAAGCCCTTAGCGAAAGAGCTAATAGATTACCTGAAAGTCAGCGATCATGATTTCAGAGGGGAT CTTACTGCCAAAATTTGCTCCATAGTTGCAAAGTTTTCCCCAGAGAAGATCTGGTACATTGATCAGATGCTCAAGGTTCTTTCTGAGGCTGGAAATTTTG TAAAAGATGAAGTATGGCATGCTTTAATTGTTGTGATAAGCAATGCTTCCGAGCTTCATGGGTATACAGTGAGAGCGTTATACAGGGCATTTCAAACATC AGCTGAACAGGAAATCCTAGTTCGAGTTACAGTCTGGTGCATCGGAGAGTATGGTGACATGTTAGTCAACAATGTTGGAATGCTTGACATAGAAGATCCT GTAACAGTAACTGAGTCAGATGCCGTGGATGTTGTAGAGAATGCTATAAAACGACATGCATCAGATCTTACCACAAAAGCAATGGCTTTGGTTGCCCTTT TGAAGCTCTCCTCGCATTTCCCTTCTTTATCAGAGAGGATCAGAGAAACAATAACTCAGTACAAAGGGAACCTTGTACTAGAATTGCAGCAAAGATCTAT AGAATTCAGTTCTATTATTGCAAAGCATCAAAGTATTAGGTCGACACTTGTAGACAGGATGCCAGTTTTGAATGAGGCAACTTTCATTGGCAAGAGGGCT GGTTCTCTTCCAGACGCAGCTTCAATTCAATCGGGGCCTTCAGTTAATCTTCCAAATGGAGTAGCCAAACCTTCGGCTCCTCTTCTAGATCTTCTGGATC TAAGTTCAGATGAAGCACCTGCACCAAGCTCTTCTGGTGGTGATCTTATTCAGGATCTTCTCGGTGTTGATCTGTCTATGCCTTCACAACAGTCTGGTGC TAGTCAAAGCTCAAAAAGTGGCACAGATGTTCTTTTGGATCTTTTGTCCATTGGATCACCTCCAGCACCTACTCAATCGCCTTCTGTACAAAATAACTCG TCTATTATAGACGTATTATCCCCCGATACAACTAAAAAACCTTCAGATTCACCATTAGATGATCTCTCATCGCTTTCACTCTCTTCAAGGGGAACTTCAA ATGGTGGAGCTGCTCCTATGATGGATTCATTGGATGCTCTTCCCACCAGTCCACCAGCAGAAAACAATGGACCTGTTTATCCATCCATAACTGCATTCGA GAGCAACTTCTTGAGGTTGATATTCGATTTCTCAAAACAGACAGGAAACCTACAAACTACAAATATCCAGGCCACCTTTACGAATTTGTCGTCTAATGTA TATACAGATTTTGTTTTTCAGGCAGCAGTTCCAAAGTTTCTTCAGTTGCAGTTAGATCCAGCTAGCAGCAACACTCTCCCTGCTAGTGGAAATGGATCCA TCACACAAAGTATGAGAGTTACTAATAGCCAATATGGGAAGAAATCTGTTGTCATGCGCATAAGGATAGCCTACAAGATAAATGGCAAGGATACACTAGA GGAAGGACAAATCAGTAATTTTCCTCGTGATTTATGAGGCCAATTGGCCAGTGCTCATAATGGTAATTACTAATTACAGTGAATATCGTTTTTTTTTTAT ACTTAATAAACATTGGCGCAGTTCATGTTTCATTCCTTCAACTAAGGTTGGAACGTTGAAATGGTTCAAGCAACTAGGAGCACTTTCTGGTCCAAATTTG AGTTCTTTTTGGTGTCTTCAAATCTTTGCTTTACAAATTATTTTTTCTTCATTAAGTTGCGAAGTATTCTTGTATGAAAATGTCCAAAATCAAAATTTGC CTTTTGCGGCACATAGTATTCTTTCACATAAAGAAATCTTGCTGTTTTAAGGGTTTGGTGTTGAATGCAATTTGATATCTCATGTATATTGTAGACAATG GCTATAGTCTATTTTGTTTTCTGTAATTGTGCAACGTAACCCTAAACTATTTCCAAAATTTCCTATCTTCATGTCTCAAGTTAATCATAAAATTTTATTG TGTTTTTATTTTTGTTTCCGAG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_32033; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_163396
| Blastp | AP-1 complex subunit gamma-2 from Arabidopsis with 64.33% of identity |
|---|---|
| Blastx | AP-1 complex subunit gamma-1 from Arabidopsis with 65.53% of identity |
| Eggnog | Adaptor-related protein complex(ENOG410XPKK) |
| Kegg | Link to kegg annotations (AT1G60070) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019439200.1) |
| Pfam | Adaptin N terminal region (PF01602.19) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |