Ll_transcript_164286

Id TrinityFTRINITY_DN53264_c3_g2_i1
Name TranscriptLl_transcript_164286
SequenceCAGCCAAGTCACACATGTGGAATGGTAATTAGATATGATGATCCTTCAATTAGATTCCTTCTAAATTTCTAATATCACAAAAGGGCACAATCGTAAATAT ATTAGTTTCATGCATCTTCTTCATCCCAATTGTGCTTAGTTGCTGCAAAACTCTTAAACCCTAACCAAGCCACTTCAACCACATCACTTGTGATTCTCAC CAGTTTCAATTTCTGAACATAAAACAAAACCGTTTCTGCCAACTCATCAATTCGAAGATTTGTTTCTTCACCTCGTTTTCTTCCAATTTCGATCATTTGT GTTAAATGGCCAATAATTCTCAGCCCCCTGGTATGCAGTTTCGGCCAGTCATTCAATCTCAGCAAGGACAACCATTTGTTCCAATGACTTCACAACAATT TGGACATGCAGGACATGCTATACCGTCCTCAAATGTTGTTCAGAGTCAGCAAGTGCAGTATTCTCAACCAGTGCAACAGTTGACTCCAAGACCAATTCAG CCTGGTCATCCTGCACCCCAGGCTCCTATGCCATATATTCAGACAAGTAGGCCACTGACATCTGCTCTACCACATTCACAGCAAATGGTTTCCCATTTAA GCAATCATATGCCTGGCTTGGCTGTGTCAGGAGCACCTCCACATCCTTCATATACTTTTGCACCATCTTATGGTCAACAGCAAGACAATGCTAATGCATT GGCTCAATACCAGCCTCCTCCTCAAATGCTTGCACCTCCTGCTGGACAACCTTGGTTGTCCTCTGTATCTCAGAGTGCTTCTGCTGTTACACCAGTGCAG CAGGGTGGAGTACAGTCATCTGATTCTACATCAACTGATGCAAGAACAAGTACCCCTAACCAGCAGTCCTTATCTGATTGGCAAGAGCATACTTCTGCTG ATGGAAGAAGATATTACTACAACAAGAGGACAAGGCAATCTAGTTGGGAGAAACCTTTGGAGTTGATGTCACCTATTGAGCGGGCAGATGCATCAACGGT GTGGAAAGAATTCACTTCTTCAGATGGGAAAAAGTATTATTACAACAAGATTACTCAGCAATCAACATGGTCAATACCAGAGGATCTTAAGTTGGCTCGT GAACAGGCACAGAAAGCTGTGAACCAGGGAGTCCAGTCAGAAACAACTGATGCATCCAATGCTGTTGTCTCCTCTAATGCAACATCAACAGATGCTAATG TAGCTATTTCCAACACTTCTTTGACATCAAATGGGATTGCTTCAAGCCCTGCTTCTCTCCCACCTATCGGAGCCGCTGATCCGCAACATTTGATTTCTGG ATCAGGGACCCCTGTTTCCCACTCTATCGTTACTCCTGGATCCACTGGAGTTGAACAAAGTACCATGACAATCACTGAATCTATAACAGTTGCAGGAAGC TCAGGAGCAGCTACCGATTCACTCGATTCCAAAGTGCCATCCATTGTTGAAAATCAAGCATCTCAAAATTTTGCTACTTCCATCACTGGAGCTTCTCTTC AAGATATTGAGGAATCCAAAAGAGGAGTGACAGGGGTTGGAAAAGTTAATGTGACTCCACCTGAGGAGAAGGCCAATGATGATGAAACTTTGGTCTATGC GAATAAGCTGGAAGCAAAAACTGCATTTAAAGGGCTTTTGGAATCTGCGAATGTTCATTCTGATTGGACATGGGAACAGGCAATGAGAGAAATCATCAAT GACAAAAGATATAATGCGCTAAAAACACCTGGTGAACGAAAACAAGCTTTTAATGAGTACTTGGGCCAAAGGAAGAAGATAGAGGCTGAAGAGAGGCGCA TGAAGCAGAAAAGAGCTCGAGAAGAATTCACTAAGATGTTGGAAGAATGCAAAGAACTTACATCATCCATAAGGTGGAGCAAAGCTATAAGTATGTTTGA AAATGATGAGCGATTCAACGCTGTTGACAAACAAAGAGACCGGGAAGATTTATTTGAAAGCTACATGGTGGAACTTGAGAGAAAGGAAAAGGAAATTGCT GCAGAGGAACACAGGCAGAATATAGCGGAATACAGGAAATTCTTAGAGTCCTGTGATTATGTGAAGGTGTATAGTCAGTGGCGGAAAGTCCAAGATCGGT TAGAGGATGATGATAGATACTTGAGACTTGAAAAAATTGATCGCTTGCTTGTTTTCCAGGACTATGTACGTGACTTGGAGAAGGAAGAAGAGGAGAAAAA AAGAATACAGAAGGACCGAGTCTATCGGGGCGAAAGGAAAAACCGTGATGCATTTTGCAAGTTGCTGGAAGAACATGTTGCTGCTGGAATTCTTACTGCT AAAACTCAATGGAGAGACTATTGTTTGAAGGTCAGGGATTTGCCTCAATACCAAGCTGTTGCGTCAAATACATCTGGTTCCACTCCAAAAGAAATATTTG AGGACGTTGCTGTAGAACTTGAAAACCAGTATCACGAAGACAAGACACTCGTAAAAGATATAATCAAGACGAGCAAGGTTACTGTAGTGTCTACATCAGT GTTTGAGGACTTTAAGTCTGCTGTCTCGGAAGAAGGTTGCAAAACAATATCTGACATCAATTTGAAGCTTGTATACGAAGAATTGCTAGAGAGAGCTAAG GAGAAGGAGGAGAAAGAAGCTAAGAAACGCCAACGCCTTGCTGATGATTTCACTAGCTTGTTATATACATTTAAGGATATTACTACTTCTTCACAATGGG AGGATTGCAAGCCACTCTTTGAAGAGACACAAGAGTACAGGTCCATTGGGGATGAAAGCTACAGTAGAGAAATTTTTGAACAGTACATTACGTACTTGGA GGAAAAAGCTAAAGAGAAGGAACGCAAGCGTGAAGATGAAAAGGCTAAAAAGGAGAAAGAAAAAGAAGAGAAAGAAAAACGGAAGGAGAAGGATAGAGAA CGTGAGAAAGAAAAGTCTAAGGAAAGACATAAGAAGGTTGACACAGATAGTGAAAATCAGGAAATAAATGACAGCCATGATTACAAGGAGGAGAAGAAAA AAGAAAAGGATAAGGAAAGGAAACATCGGAAGAGGCGCCAGAGCAGCATAGAGGATGTTGATTCTGAAAGGGATGAAAAGGAAGAGTCCAAGAAATCACG AAGACATGGCAGTGACCGCAAGAAGTCTAGGAAGCATGCGAACTCTGAATCAGATAACGAAAGTAGGCATAGAAGACACAAGAAGGAGCACCGGGATGGT TCCAGAAAAACTGGGGGCCATGTGGAGCTTGAAGACGGGGAGCTCGGTGATGATGGTGATATTTAATTGTTCGTTGTAGTGGTGAGATAAAGAACTTAAA CTGCATCTTTTGAAGAATATTATTGAGTTCAATTGTCATTGTCAAATACACTTTAGGTCTTGTTATTCCTCTTTTCAGGAAACATCTGACTTAGGATCTT GAAGTGCAAAACGAGTTTTAGAGTACTAATTTTAATTTTACACCAGCCACTTTTGTTTAGATGTTCATCTTTTGCTGATTATATAGCAGATAAATTTGGA ATCCTATGGATAGACTTACTTCTTTTAATAACGTTATTATTAGTAGAACATTGTATTTTATATGAATTCAGCATCTGAAGTCATTTCATTCTTCCTCGTC TTTCCTGATGCTGACATGGAAAAACCTGCTTACCTAGAAGCCTTTTAGTATGGCCCCACCTGGTTAGCCGTCCAAACTTGGTCCTTGACTTAAGCCGAAG CAGCCGGTTTAAGCAGCATGAACCCACCTGGGAAACCAGTCGAATTTGGTCCTTGACTAGTTGACTTAACCAGAAGTAGCCGGTTACATTGTGGTATTTG GTTTAAACATACCTGTTTTGTAGTACCCAATATATCAATTATAACATATCTTGGTTACACCCAAAGACTGCTGAGTTTAGACCAAAAAACAGCTATGAGT TGACCAGTTTTACAGTTTTTCTCCATTTCACTGATGCAAAAGTCACCGTTCACTAGTTCACAACTCATCGTATTGTAAATTTACTTTGCAAGGCCTGCAA ATAAATAATCGAAGATTTTCGATGGATTTCTAGAATTATG BLAST
Tissueflowers
Gene nameLI_gene_32223; 
Additional informationdetails; 

Expression of Ll_transcript_164286

Labels

FPAB abscising flower pedicels
FPNAB    non-abscising flower pedicels
LF1 lower flowers stage 1
LF2 lower flowers stage 2
LF3 lower flowers stage 3
LF4 lower flowers stage 4
UF1 upper flowers stage 1
UF2 upper flowers stage 2
UF3 upper flowers stage 3
UF4 upper flowers stage 4

Annotations of Ll_transcript_164286

BlastpPre-mRNA-processing protein 40A from Arabidopsis with 55.5% of identity
BlastxPre-mRNA-processing protein 40A from Arabidopsis with 56.11% of identity
EggnogPRP40 pre-mRNA processing factor 40 homolog(COG5104)
KeggLink to kegg annotations (AT1G44910)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019436968.1)
PfamWW domain (PF00397.25)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;
Links to GO: General; Genes and gene products; Annotations; Ontology;