Ll_transcript_164286

• Id Trinity: FTRINITY_DN53264_c3_g2_i1
• Name Transcript: Ll_transcript_164286
• Sequence: CAGCCAAGTCACACATGTGGAATGGTAATTAGATATGATGATCCTTCAATTAGATTCCTTCTAAATTTCTAATATCACAAAAGGGCACAATCGTAAATAT ATTAGTTTCATGCATCTTCTTCATCCCAATTGTGCTTAGTTGCTGCAAAACTCTTAAACCCTAACCAAGCCACTTCAACCACATCACTTGTGATTCTCAC CAGTTTCAATTTCTGAACATAAAACAAAACCGTTTCTGCCAACTCATCAATTCGAAGATTTGTTTCTTCACCTCGTTTTCTTCCAATTTCGATCATTTGT GTTAAATGGCCAATAATTCTCAGCCCCCTGGTATGCAGTTTCGGCCAGTCATTCAATCTCAGCAAGGACAACCATTTGTTCCAATGACTTCACAACAATT TGGACATGCAGGACATGCTATACCGTCCTCAAATGTTGTTCAGAGTCAGCAAGTGCAGTATTCTCAACCAGTGCAACAGTTGACTCCAAGACCAATTCAG CCTGGTCATCCTGCACCCCAGGCTCCTATGCCATATATTCAGACAAGTAGGCCACTGACATCTGCTCTACCACATTCACAGCAAATGGTTTCCCATTTAA GCAATCATATGCCTGGCTTGGCTGTGTCAGGAGCACCTCCACATCCTTCATATACTTTTGCACCATCTTATGGTCAACAGCAAGACAATGCTAATGCATT GGCTCAATACCAGCCTCCTCCTCAAATGCTTGCACCTCCTGCTGGACAACCTTGGTTGTCCTCTGTATCTCAGAGTGCTTCTGCTGTTACACCAGTGCAG CAGGGTGGAGTACAGTCATCTGATTCTACATCAACTGATGCAAGAACAAGTACCCCTAACCAGCAGTCCTTATCTGATTGGCAAGAGCATACTTCTGCTG ATGGAAGAAGATATTACTACAACAAGAGGACAAGGCAATCTAGTTGGGAGAAACCTTTGGAGTTGATGTCACCTATTGAGCGGGCAGATGCATCAACGGT GTGGAAAGAATTCACTTCTTCAGATGGGAAAAAGTATTATTACAACAAGATTACTCAGCAATCAACATGGTCAATACCAGAGGATCTTAAGTTGGCTCGT GAACAGGCACAGAAAGCTGTGAACCAGGGAGTCCAGTCAGAAACAACTGATGCATCCAATGCTGTTGTCTCCTCTAATGCAACATCAACAGATGCTAATG TAGCTATTTCCAACACTTCTTTGACATCAAATGGGATTGCTTCAAGCCCTGCTTCTCTCCCACCTATCGGAGCCGCTGATCCGCAACATTTGATTTCTGG ATCAGGGACCCCTGTTTCCCACTCTATCGTTACTCCTGGATCCACTGGAGTTGAACAAAGTACCATGACAATCACTGAATCTATAACAGTTGCAGGAAGC TCAGGAGCAGCTACCGATTCACTCGATTCCAAAGTGCCATCCATTGTTGAAAATCAAGCATCTCAAAATTTTGCTACTTCCATCACTGGAGCTTCTCTTC AAGATATTGAGGAATCCAAAAGAGGAGTGACAGGGGTTGGAAAAGTTAATGTGACTCCACCTGAGGAGAAGGCCAATGATGATGAAACTTTGGTCTATGC GAATAAGCTGGAAGCAAAAACTGCATTTAAAGGGCTTTTGGAATCTGCGAATGTTCATTCTGATTGGACATGGGAACAGGCAATGAGAGAAATCATCAAT GACAAAAGATATAATGCGCTAAAAACACCTGGTGAACGAAAACAAGCTTTTAATGAGTACTTGGGCCAAAGGAAGAAGATAGAGGCTGAAGAGAGGCGCA TGAAGCAGAAAAGAGCTCGAGAAGAATTCACTAAGATGTTGGAAGAATGCAAAGAACTTACATCATCCATAAGGTGGAGCAAAGCTATAAGTATGTTTGA AAATGATGAGCGATTCAACGCTGTTGACAAACAAAGAGACCGGGAAGATTTATTTGAAAGCTACATGGTGGAACTTGAGAGAAAGGAAAAGGAAATTGCT GCAGAGGAACACAGGCAGAATATAGCGGAATACAGGAAATTCTTAGAGTCCTGTGATTATGTGAAGGTGTATAGTCAGTGGCGGAAAGTCCAAGATCGGT TAGAGGATGATGATAGATACTTGAGACTTGAAAAAATTGATCGCTTGCTTGTTTTCCAGGACTATGTACGTGACTTGGAGAAGGAAGAAGAGGAGAAAAA AAGAATACAGAAGGACCGAGTCTATCGGGGCGAAAGGAAAAACCGTGATGCATTTTGCAAGTTGCTGGAAGAACATGTTGCTGCTGGAATTCTTACTGCT AAAACTCAATGGAGAGACTATTGTTTGAAGGTCAGGGATTTGCCTCAATACCAAGCTGTTGCGTCAAATACATCTGGTTCCACTCCAAAAGAAATATTTG AGGACGTTGCTGTAGAACTTGAAAACCAGTATCACGAAGACAAGACACTCGTAAAAGATATAATCAAGACGAGCAAGGTTACTGTAGTGTCTACATCAGT GTTTGAGGACTTTAAGTCTGCTGTCTCGGAAGAAGGTTGCAAAACAATATCTGACATCAATTTGAAGCTTGTATACGAAGAATTGCTAGAGAGAGCTAAG GAGAAGGAGGAGAAAGAAGCTAAGAAACGCCAACGCCTTGCTGATGATTTCACTAGCTTGTTATATACATTTAAGGATATTACTACTTCTTCACAATGGG AGGATTGCAAGCCACTCTTTGAAGAGACACAAGAGTACAGGTCCATTGGGGATGAAAGCTACAGTAGAGAAATTTTTGAACAGTACATTACGTACTTGGA GGAAAAAGCTAAAGAGAAGGAACGCAAGCGTGAAGATGAAAAGGCTAAAAAGGAGAAAGAAAAAGAAGAGAAAGAAAAACGGAAGGAGAAGGATAGAGAA CGTGAGAAAGAAAAGTCTAAGGAAAGACATAAGAAGGTTGACACAGATAGTGAAAATCAGGAAATAAATGACAGCCATGATTACAAGGAGGAGAAGAAAA AAGAAAAGGATAAGGAAAGGAAACATCGGAAGAGGCGCCAGAGCAGCATAGAGGATGTTGATTCTGAAAGGGATGAAAAGGAAGAGTCCAAGAAATCACG AAGACATGGCAGTGACCGCAAGAAGTCTAGGAAGCATGCGAACTCTGAATCAGATAACGAAAGTAGGCATAGAAGACACAAGAAGGAGCACCGGGATGGT TCCAGAAAAACTGGGGGCCATGTGGAGCTTGAAGACGGGGAGCTCGGTGATGATGGTGATATTTAATTGTTCGTTGTAGTGGTGAGATAAAGAACTTAAA CTGCATCTTTTGAAGAATATTATTGAGTTCAATTGTCATTGTCAAATACACTTTAGGTCTTGTTATTCCTCTTTTCAGGAAACATCTGACTTAGGATCTT GAAGTGCAAAACGAGTTTTAGAGTACTAATTTTAATTTTACACCAGCCACTTTTGTTTAGATGTTCATCTTTTGCTGATTATATAGCAGATAAATTTGGA ATCCTATGGATAGACTTACTTCTTTTAATAACGTTATTATTAGTAGAACATTGTATTTTATATGAATTCAGCATCTGAAGTCATTTCATTCTTCCTCGTC TTTCCTGATGCTGACATGGAAAAACCTGCTTACCTAGAAGCCTTTTAGTATGGCCCCACCTGGTTAGCCGTCCAAACTTGGTCCTTGACTTAAGCCGAAG CAGCCGGTTTAAGCAGCATGAACCCACCTGGGAAACCAGTCGAATTTGGTCCTTGACTAGTTGACTTAACCAGAAGTAGCCGGTTACATTGTGGTATTTG GTTTAAACATACCTGTTTTGTAGTACCCAATATATCAATTATAACATATCTTGGTTACACCCAAAGACTGCTGAGTTTAGACCAAAAAACAGCTATGAGT TGACCAGTTTTACAGTTTTTCTCCATTTCACTGATGCAAAAGTCACCGTTCACTAGTTCACAACTCATCGTATTGTAAATTTACTTTGCAAGGCCTGCAA ATAAATAATCGAAGATTTTCGATGGATTTCTAGAATTATG
• Tissue: flowers
• Gene name: LI_gene_32223;
• Additional information: details;

Expression of Ll_transcript_164286

FPKM

• FPAB: 8.9
• FPNAB: 9.5
• LF1: 9.1
• LF2: 7.7
• LF3: 6.9
• LF4: 7.6
• UF1: 5.5
• UF2: 7.8
• UF3: 8.5
• UF4: 6

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_164286

• Blastp: Pre-mRNA-processing protein 40A from Arabidopsis with 55.5% of identity
• Blastx: Pre-mRNA-processing protein 40A from Arabidopsis with 56.11% of identity
• Eggnog: PRP40 pre-mRNA processing factor 40 homolog(COG5104)
• Kegg: Link to kegg annotations (AT1G44910)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019436968.1)
• Pfam: WW domain (PF00397.25)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;