| Id Trinity | FTRINITY_DN53264_c3_g2_i11 |
|---|---|
| Name Transcript | Ll_transcript_164299 |
| Sequence | ATTTAAGACGTTTTTTCATGTTTAATATTAAATGTGATAGATTCAATTGCTATATTTTTTTTACGCTTTGTGGTTGTTGAAGGTATTAGTTATTTATCAC TAGGGTATAAATAGTTACTTGAATGTGCCTTATTTAAATTTGGTTTTAGCTTAGATTGTCTATATTTTTTTGTCCGAACACGCCGATTGCACCCGAAAAT CATTTACAGACGGGAGAAGCTTTCTTCAATTGATAGCGAACTGTTATATACACCATTAGTCTGGCGGATGAATATTTCATCTGCTATAAAGCGATCATTT GTGTTAAATGGCCAATAATTCTCAGCCCCCTGGTATGCAGTTTCGGCCAGTCATTCAATCTCAGCAAGGACAACCATTTGTTCCAATGACTTCACAACAA TTTGGACATGCAGGACATGCTATACCGTCCTCAAATGTTGTTCAGAGTCAGCAAGTGCAGTATTCTCAACCAGTGCAACAGTTGACTCCAAGACCAATTC AGCCTGGTCATCCTGCACCCCAGGCTCCTATGCCATATATTCAGACAAGTAGGCCACTGACATCTGCTCTACCACATTCACAGCAAATGGTTTCCCATTT AAGCAATCATATGCCTGGCTTGGCTGTGTCAGGAGCACCTCCACATCCTTCATATACTTTTGCACCATCTTATGGTCAACAGCAAGACAATGCTAATGCA TTGGCTCAATACCAGCCTCCTCCTCAAATGCTTGCACCTCCTGCTGGACAACCTTGGTTGTCCTCTGTATCTCAGAGTGCTTCTGCTGTTACACCAGTGC AGCAGGGTGGAGTACAGTCATCTGATTCTACATCAACTGATGCAAGAACAAGTACCCCTAACCAGCAGTCCTTATCTGATTGGCAAGAGCATACTTCTGC TGATGGAAGAAGATATTACTACAACAAGAGGACAAGGCAATCTAGTTGGGAGAAACCTTTGGAGTTGATGTCACCTATTGAGCGGGCAGATGCATCAACG GTGTGGAAAGAATTCACTTCTTCAGATGGGAAAAAGTATTATTACAACAAGATTACTCAGCAATCAACATGGTCAATACCAGAGGATCTTAAGTTGGCTC GTGAACAGGCACAGAAAGCTGTGAACCAGGGAGTCCAGTCAGAAACAACTGATGCATCCAATGCTGTTGTCTCCTCTAATGCAACATCAACAGATGCTAA TGTAGCTATTTCCAACACTTCTTTGACATCAAATGGGATTGCTTCAAGCCCTGCTTCTCTCCCACCTATCGGAGCCGCTGATCCGCAACATTTGATTTCT GGATCAGGGACCCCTGTTTCCCACTCTATCGTTACTCCTGGATCCACTGGAGTTGAACAAAGTACCATGACAATCACTGAATCTATAACAGTTGCAGGAA GCTCAGGAGCAGCTACCGATTCACTCGATTCCAAAGTGCCATCCATTGTTGAAAATCAAGCATCTCAAAATTTTGCTACTTCCATCACTGGAGCTTCTCT TCAAGATATTGAGGAATCCAAAAGAGGAGTGACAGGGGTTGGAAAAGTTAATGTGACTCCACCTGAGGAGAAGGCCAATGATGATGAAACTTTGGTCTAT GCGAATAAGCTGGAAGCAAAAACTGCATTTAAAGGGCTTTTGGAATCTGCGAATGTTCATTCTGATTGGACATGGGAACAGGCAATGAGAGAAATCATCA ATGACAAAAGATATAATGCGCTAAAAACACCTGGTGAACGAAAACAAGCTTTTAATGAGTACTTGGGCCAAAGGAAGAAGATAGAGGCTGAAGAGAGGCG CATGAAGCAGAAAAGAGCTCGAGAAGAATTCACTAAGATGTTGGAAGAATGCAAAGAACTTACATCATCCATAAGGTGGAGCAAAGCTATAAGTATGTTT GAAAATGATGAGCGATTCAACGCTGTTGACAAACAAAGAGACCGGGAAGATTTATTTGAAAGCTACATGGTGGAACTTGAGAGAAAGGAAAAGGAAATTG CTGCAGAGGAACACAGGCAGAATATAGCGGAATACAGGAAATTCTTAGAGTCCTGTGATTATGTGAAGGTGTATAGTCAGTGGCGGAAAGTCCAAGATCG GTTAGAGGATGATGATAGATACTTGAGACTTGAAAAAATTGATCGCTTGCTTGTTTTCCAGGACTATGTACGTGACTTGGAGAAGGAAGAAGAGGAGAAA AAAAGAATACAGAAGGACCGAGTCTATCGGGGCGAAAGGAAAAACCGTGATGCATTTTGCAAGTTGCTGGAAGAACATGTTGCTGCTGGAATTCTTACTG CTAAAACTCAATGGAGAGACTATTGTTTGAAGGTCAGGGATTTGCCTCAATACCAAGCTGTTGCGTCAAATACATCTGGTTCCACTCCAAAAGAAATATT TGAGGACGTTGCTGTAGAACTTGAAAACCAGTATCACGAAGACAAGACACTCGTAAAAGATATAATCAAGACGAGCAAGGTTACTGTAGTGTCTACATCA GTGTTTGAGGACTTTAAGTCTGCTGTCTCGGAAGAAGGTTGCAAAACAATATCTGACATCAATTTGAAGCTTGTATACGAAGAATTGCTAGAGAGAGCTA AGGAGAAGGAGGAGAAAGAAGCTAAGAAACGCCAACGCCTTGCTGATGATTTCACTAGCTTGTTATATACATTTAAGGATATTACTACTTCTTCACAATG GGAGGATTGCAAGCCACTCTTTGAAGAGACACAAGAGTACAGGTCCATTGGGGATGAAAGCTACAGTAGAGAAATTTTTGAACAGTACATTACGTACTTG GAGGAAAAAGCTAAAGAGAAGGAACGCAAGCGTGAAGATGAAAAGGCTAAAAAGGAGAAAGAAAAAGAAGAGAAAGAAAAACGGAAGGAGAAGGATAGAG AACGTGAGAAAGAAAAGTCTAAGGAAAGACATAAGAAGGTTGACACAGATAGTGAAAATCAGGAAATAAATGACAGCCATGATTACAAGGAGGAGAAGAA AAAAGAAAAGGATAAGGAAAGGAAACATCGGAAGAGGCGCCAGAGCAGCATAGAGGATGTTGATTCTGAAAGGGATGAAAAGGAAGAGTCCAAGAAATCA CGAAGACATGGCAGTGACCGCAAGAAGTCTAGGAAGCATGCGAACTCTGAATCAGATAACGAAAGTAGGCATAGAAGACACAAGAAGGAGCACCGGGATG GTTCCAGAAAAACTGGGGGCCATGTGGAGCTTGAAGACGGGGAGCTCGGTGATGATGGTGATATTTAATTGTTCGTTGTAGTGGTGAGATAAAGAACTTA AACTGCATCTTTTGAAGAATATTATTGAGTTCAATTGTCATTGTCAAATACACTTTAGGTCTTGTTATTCCTCTTTTCAGGAAACATCTGACTTAGGATC TTGAAGTGCAAAACGAGTTTTAGAGTACTAATTTTAATTTTACACCAGCCACTTTTGTTTAGATGTTCATCTTTTGCTGATTATATAGCAGATAAATTTG GAATCCTATGGATAGACTTACTTCTTTTAATAACGTTATTATTAGTAGAACATTGTATTTTATATGAATTCAGCATCTGAAGTCATTTCATTCTTCCTCG TCTTTCCTGATGCTGACATGGAAAAACCTGCTTACCTAGAAGCCTTTTAGTATGGCCCCACCTGGTTAGCCGTCCAAACTTGGTCCTTGACTTAAGCCGA AGCAGCCGGTTTAAGCAGCATGAACCCACCTGGGAAACCAGTCGAATTTGGTCCTTGACTAGTTGACTTAACCAGAAGTAGCCGGTTACATTGTGGTATT TGGTTTAAACATACCTGTTTTGTAGTACCCAATATATCAATTATAACATATCTTGGTTACACCCAAAGACTGCTGAGTTTAGACCAAAAAACAGCTATGA GTTGACCAGTTTTACAGTTTTTCTCCATTTCACTGATGCAAAAGTCACCGTTCACTAGTTCACAACTCATCGTATTGTAAATTTACTTTGCAAGGCCTGC AAATAAATAATCGAAGATTTTCGATGGATTTCTAGAATTATGâBLAST |
| Tissue | flowers |
| Gene name | LI_gene_32223; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_164299
| Blastp | Pre-mRNA-processing protein 40A from Arabidopsis with 55.5% of identity |
|---|---|
| Blastx | Pre-mRNA-processing protein 40A from Arabidopsis with 56.11% of identity |
| Eggnog | PRP40 pre-mRNA processing factor 40 homolog(COG5104) |
| Kegg | Link to kegg annotations (AT1G44910) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019436968.1) |
| Pfam | WW domain (PF00397.25) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |