Id Trinity | FTRINITY_DN53281_c1_g2_i1 |
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Name Transcript | Ll_transcript_162541 |
Sequence | AGAGTTTTCATTTTGTAGGGTTGAATTTTGAGATAGACCCAATCTCCTTCCCTAAATTCCACCATTCTTCTATGCTTGTCAGCTTGTTTCTTCATTTGAT CCTAGGCTTTCAGTAGGTTATGCTTCAATTCCTTCAATATTTCATCCATTCTTTGCATCAACTGATTAATATCTTTCACTTTGGATGGAAATTCTCCGGC ATTCATGAGCATGAGTGGATCCATGCCATACAAAGCTCTAAAAGGTGTCATCCCAACTGAGCTATGGTTGGTTGAATTATACCAAAACTCAGCCCAAGCT AACCATTGACCCCACTGTCTAGGTCCAGGCCCTGCAAAACATTTCAAATAACCCTCCAAACACCTGTTTACCTCCTCTGTTTGCTCATCAGTTTGTGGGT GATAGGCTGTGCTTAGCTTCAATTTGGTTCCAGCAAGCCTAAATAATTCTTTCCAAAAGCTACTAACAAAAACAGGATCCCTATCAGACACAATAGAAGA GGGAAACCCATGCAGTTTGACCACCTCATTCAGAAACAAAGAAGCTACCTCTTTAGCAGAAAATGGGTGACCAAGTGCATAGAAACGAGCATACTTAGTC AACCTTTCAACTACTACTAAGATAGTATCCTTTCCTTGGGATTTTGGCAAGCTTCCAATGAAATCCATTGATATATCCATCCAAACCTGAGTAGGGATTG ATAATGGTTGTAACAGCCCCCCTGGGAGCAATGTAGCATTC BLAST |
Tissue | flowers |
Gene name | LI_gene_32336; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_162541
Blastp | Transposon Ty3-G Gag-Pol polyprotein from Saccharomyces with 39.64% of identity |
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Blastx | Transposon Ty3-G Gag-Pol polyprotein from Saccharomyces with 39.64% of identity |
Eggnog | - |
Kegg | Link to kegg annotations (YGR109W-B) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019459958.1) |
Pfam | Integrase core domain (PF00665.25) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |