Ll_transcript_163132

• Id Trinity: FTRINITY_DN53283_c5_g1_i3
• Name Transcript: Ll_transcript_163132
• Sequence: ATTTGGATTACCTTTTCTGAAAAGTCAATAATAATTAAAAATCAATGGTGATGATGTGATGGCAGTGTATAAAACTCATACAATGTCAGTGCATACATCT TTATCTCTATTCATAAATCATAACCATGTTAGTCATTTGTGGTTATACTATCTTTTGTGCAGAATTTCTGGCAATCCAATCGTGATACCAATTTCTCAAT CTAGGCCAAGTCACAAAGTTTAGGTTAGGAGAATCTTCCAAATTATGAATTATGTGATGGTTTTAAGTATGAATTAGTTTAAGTTTATTTGAGAGATGAC AATGGGAGTTCTCATGTAATCACCAATGATCAAATTTGTAGTAAGATTGAGAAAGACGTGGTGGACTTGGATAGAGGTGAAAACATAAATGCCGCGGAAA AGCTTATTATGAGAATTATGCCTATAGAAGTGAGTTTTCGATCTGGAAAGGCCGATATAGTTATAAAGATTGGAGAATGAATCTGCCAGATTTCTCGTCA GTCGTCACCATTTCCAGATAAAAAAAATTTATTGGCCCATCTAAGGAACAATGAAAAAAAAAAAAGAATCTTTGAGATGTATATGAGATTGAAATTAGGG AAACTCGTTGACATTTTCCCTGAAGAATGACAAGTTATTAGGTTTATATCCCATCAGAATCATGAGTTATTGCCTCTGGAAGATGTATATTTTATTGCAT TAACTGCAACTTTCCTAAGGAAGATTAAGAGGGAAGTCTGTTATTAAAAGAAACTGGTCTTTTATTGAAGCAGATAAAATTGGTTATGCTTAAGGAAAAT GTAAAGCTTGAGGGTCCTCCTTTTGTTCACAAAGACACTCATAGCCTCTTCAATAATATTTACCAAGATTATATGGATGATTATGCTAAATGCTAATTAT CTTCTTGAGTTTGTAAGGAGGACAAGGATGACTGCTAGTATCATCATCCATGTTCTCTTGGTGACTCTTATTGCAGAAGTTAATAATGTCTGTGAAAAAA TGAAAGATCCATATGCTTTATAAATTTTTCAAGCTGCATAAGACATTATTTGTTTTGCTGAAAGGTCACCTTCTTTTGATTACAAAATTTAATCCTCATC TTCGAAGTGTTTGCGGTTAGATGTGAGAAAAGCAGAAAACTCTTCGTAGGCATGATTTCTGTGAGATATAAAGTGAATAACTCACCATTCTTATGGGAAG ATGTCAAGGAATATCTTCAATTTCAATCTCATATTACATCCACATCTTAAATATTCCATATTTGCTTGCTCCTTCTGTCAACAACTTTTTATCAGGAAAT CTTTCATGGTAATGACACATCCTGCCTATTCATTCTTTAATTTTAATTAATAAATTGACCTTTTCATAATGAAACCCCACTCCTTTGGGGATAAAACTTG TAAGATCAATAAAACTGGTGATTCTCAACCTACATTGACACATAGGTATCATTACAGGACTTCCAGAATGAAGAAAAAATGCTATAACCACATGTATTTT ACATGATTTATAATTATTGAAGCTAACCCCACTCCAAAAAAAAATAAGTGATGACAAACGTTTAAAAGTGAAGGCTTGATGTTAGATGAGAAGCATCCAA AGAAAAATTAAAAGAGGAGAGCTGATATTGCATCCTACCTGCTACTTTTGCTTGATGATGATTGGCATTGCAGGTTTAGACTTTGTTCAAGCTACGAACC TTAGGAGAACCACAGAAAAGCTAGCTGTTGAGATTGGAAAGCCCAAGGCCAAGTAAACCCTACACCAAAATTATGTGCTTGTGCCTTGTAATGTGGGACT CAAATATCATGCCTTGCAATTGGATCCTAACATCCCATCATGCTCCGCAGCCTCCGCGCCTAAGCAGGCAGACAGTGCACTATCCCTTTGAATAATCCGG GGCAAACACTGCAATGAGATGTGTTCTCAGGAACTTGGTCAGAAGGAGTACACTATTCTGGGGTTCTGGAAGAATGGTTTGGTCAACATTGGTGGTCAAC ACGTCCTGTCTTACTGCTGTTCACAATGCTTCTAGTATTCCTGCCTCTTGCATCATTTAGGCGTGTTGATTCACTGAGATATACATCAGCATTGTCCGTG GGGTTGGCTGTTATTTTTGTGGTGATAACAGCAGGAGTAGCAACTTTTAAGTTTATTGATGGAAGCATTGGGATGCCACGCTTAATGCCAAAATTCACTG GCCAGGAATCCTTTTGGAAGCTCTTCACAACTATCCCCATATTAGTCACAGCTTACATCTGTCATCATAACGTTCATCCTATAGATAATGAACTTAAAGA TCCTACCCATATGAAGTCAATAGTCCGGACATCACTCTTGTTATGCGCATCTGTGTATGTAGCAACCAGCCTTTTTGGATTTTTCTTATTTGGGGACAAA ACACTGGATGATGTTCTTGCCAACTTCGATGGTGATCTTGGAATTCCTTATGGTTCATTTCTTAATGATGTAGTTAGAGTGAGCTACGGTGCCCACCTTA TCCTTGTGTTCCCAATTGTGTTTTACTCCCTTCGCCTTAACGTAGATGGTCTTCTGTTTCCGCACGCCATTCCTCTTGCCTTTGACAACCAGAGATTCTA TTTGGTGACCACAGTTCTCTTGATTTTCATTTTTCTTGGAGCCAATTTTGTTCCCAGCATCTGGGATGCCTTCCAGTTTACAGGTGCCACAGCTTCTGTC TCTGCTGCATTCATTTTTCCTGCTGCCATTGCTATTAGGGATACACGTGGGTTTGCAACAAAGAAAGACAAACGGTTATCTTGGTTGATGATACTTTTAG CCATCTCATCTAGCACTGTAGCCATCTCTAGTGACTTGTATAGCATCTTCAGTAGTGAAGCAGGAGCAGCAGCTAGAACCTGATATTATCAAGATTACTC TGATAGATGATACTGAAATCAAAATATCCTTGACTGGATTGTGTGACAATATATAAAGCAAGAAGGCAGAGATGCCAAAAATGAGAAAACAATGCTTCAA TACCGAATTTGATTATTTGGTTGCTGTGGAATTTCACTGTAATCTTACTGACAGATTAAGGATGATAAACAGTCGCTGCCAGTCACTCACAACTAGCTGG GTCATCATGGTATGCACTGGCCGAGGATCTAAGGAGCAGCTCCTTCCCTCAGATTTTTCAAACAATTCTTACTAATATATAGGTATATTAACAACATCCT TTGTTTAAATTGAAATCCTTTGACTTATGTGAAAATTGAAAACCCAAGAGTTCCTGCTTCTTCCTTGGTGAAAAAACTCAAGCCACTTCCTTATCAAGTC AAGAATCACTTTCCTAGGTTCCCTCTTACTTCTTCCTTTTACCCTTCTCCTTTTCCATTTTTTTAATTTGATACTCTTTTATTTTAATTTGGTACTCTTC TCTTGTTCTCATGATCTTTGCTATTCTTCTTTTTCATTGTACATAATGAATCTTATTAGTTTTTTATATAAATATTTTCTGATCAATTATTTTTATTTTG AATTTACATGTTACTTTAAAATTTGATATAAAATTATGTATCTTTATATTGCATTGTCATTTTCGGTTTTCTATTAG
• Tissue: flowers
• Gene name: LI_gene_32366;
• Additional information: details;

Expression of Ll_transcript_163132

FPKM

• FPAB: 1.1
• FPNAB: 1.7
• LF1: 0.9
• LF2: 0.8
• LF3: 0.8
• LF4: 0.4
• UF1: 0.7
• UF2: 1.1
• UF3: 0.6
• UF4: 0.3

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_163132

• Blastp: Amino acid transporter AVT6A from Arabidopsis with 61.15% of identity
• Blastx: Amino acid transporter AVT6A from Arabidopsis with 60% of identity
• Eggnog: amino acid transport(COG0814)
• Kegg: Link to kegg annotations (AT3G30390)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019458311.1)
• Pfam: Transmembrane amino acid transporter protein (PF01490.17)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;