| Id Trinity | FTRINITY_DN53283_c5_g1_i6 |
|---|---|
| Name Transcript | Ll_transcript_163137 |
| Sequence | ATTTGGATTACCTTTTCTGAAAAGTCAATAATAATTAAAAATCAATGGTGATGATGTGATGGCAGTGTATAAAACTCATACAATGTCAGTGCATACATCT TTATCTCTATTCATAAATCATAACCATGTTAGTCATTTGTGGTTATACTATCTTTTGTGCAGAATTTCTGGCAATCCAATCGTGATACCAATTTCTCAAT CTAGGCCAAGTCACAAAGTTTAGGTTAGGAGAATCTTCCAAATTATGAATTATGTGATGGTTTTAAGTATGAATTAGTTTAAGTTTATTTGAGAGATGAC AATGGGAGTTCTCATGTAATCACCAATGATCAAATTTGTAGTAAGATTGAGAAAGACGTGGTGGACTTGGATAGAGGTGAAAACATAAATGCCGCGGAAA AGCTTATTATGAGAATTATGCCTATAGAAGTGAGTTTTCGATCTGGAAAGGCCGATATAGTTATAAAGATTGGAGAATGAATCTGCCAGATTTCTCGTCA GTCGTCACCATTTCCAGATAAAAAAAATTTATTGGCCCATCTAAGGAACAATGAAAAAAAAAAAAGAATCTTTGAGATGTATATGAGATTGAAATTAGGG AAACTCGTTGACATTTTCCCTGAAGAATGACAAGTTATTAGGTTTATATCCCATCAGAATCATGAGTTATTGCCTCTGGAAGATGTATATTTTATTGCAT TAACTGCAACTTTCCTAAGGAAGATTAAGAGGGAAGTCTGTTATTAAAAGAAACTGGTCTTTTATTGAAGCAGATAAAATTGGTTATGCTTAAGGAAAAT GTAAAGCTTGAGGGTCCTCCTTTTGTTCACAAAGACACTCATAGCCTCTTCAATAATATTTACCAAGATTATATGGATGATTATGCTAAATGCTAATTAT CTTCTTGAGTTTGTAAGGAGGACAAGGATGACTGCTAGTATCATCATCCATGTTCTCTTGGTGACTCTTATTGCAGAAGTTAATAATGTCTGTGAAAAAA TGAAAGATCCATATGCTTTATAAATTTTTCAAGCTGCATAAGACATTATTTGTTTTGCTGAAAGGTCACCTTCTTTTGATTACAAAATTTAATCCTCATC TTCGAAGTGTTTGCGGTTAGATGTGAGAAAAGCAGAAAACTCTTCGTAGGCATGATTTCTGTGAGATATAAAGTGAATAACTCACCATTCTTATGGGAAG ATGTCAAGGAATATCTTCAATTTCAATCTCATATTACATCCACATCTTAAATATTCCATATTTGCTTGCTCCTTCTGTCAACAACTTTTTATCAGGAAAT CTTTCATGGTAATGACACATCCTGCCTATTCATTCTTTAATTTTAATTAATAAATTGACCTTTTCATAATGAAACCCCACTCCTTTGGGGATAAAACTTG TAAGATCAATAAAACTGGTGATTCTCAACCTACATTGACACATAGGTATCATTACAGGACTTCCAGAATGAAGAAAAAATGCTATAACCACATGTATTTT ACATGATTTATAATTATTGAAGCTAACCCCACTCCAAAAAAAAATAAGTGATGACAAACGTTTAAAAGTGAAGGCTTGATGTTAGATGAGAAGCATCCAA AGAAAAATTAAAAGAGGAGAGCTGATATTGCATCCTACCTGCTACTTTTGCTTGATGATGATTGGCATTGCAGGTTTAGACTTTGTTCAAGCTACGAACC TTAGGAGAACCACAGAAAAGCTAGCTGTTGAGATTGGAAAGCCCAAGGCCAAGTAAACCCTACACCAAAATTATGTGCTTGTGCCTTGTAATGTGGGACT CAAATATCATGCCTTGCAATTGGATCCTAACATCCCATCATGCTCCGCAGCCTCCGCGCCTAAGCAGGCAGACAGTGCACTATCCCTTTGAATAATCCGG GGCAAACACTGCAATGAGATGTGTTCTCAGGAACTTGGTCAGAAGGAGTACACTATTCTGGGGTTCTGGAAGAATGGTTTGGTCAACATTGGTGGTCAAC ACGTCCTGTCTTACTGCTGTTCACAATGCTTCTAGTATTCCTGCCTCTTGCATCATTTAGGCGTGTTGATTCACTGAGATATACATCAGCATTGTCCGTG GGGTTGGCTGTTATTTTTGTGGTGATAACAGCAGGAGTAGCAACTTTTAAGTTTATTGATGGAAGCATTGGGATGCCACGCTTAATGCCAAAATTCACTG GCCAGGAATCCTTTTGGAAGCTCTTCACAACTATCCCCATATTAGTCACAGCTTACATCTGTCATCATAACGTTCATCCTATAGATAATGAACTTAAAGA TCCTACCCATATGAAGTCAATAGTCCGGACATCACTCTTGTTATGCGCATCTGTGTATGTAGCAACCAGCCTTTTTGGATTTTTCTTATTTGGGGACAAA ACACTGGATGATGTTCTTGCCAACTTCGATGGTGATCTTGGAATTCCTTATGGTTCATTTCTTAATGATGTAGTTAGAGTGAGCTACGGTGCCCACCTTA TCCTTGTGTTCCCAATTGTGTTTTACTCCCTTCGCCTTAACGTAGATGGTCTTCTGTTTCCGCACGCCATTCCTCTTGCCTTTGACAACCAGAGATTCTA TTTGGTGACCACAGTTCTCTTGATTTTCATTTTTCTTGGAGCCAATTTTGTTCCCAGCATCTGGGATGCCTTCCAGTTTACAGGGATACACGTGGGTTTG CAACAAAGAAAGACAAACGGTTATCTTGGTTGATGATACTTTTAGCCATCTCATCTAGCACTGTAGCCATCTCTAGTGACTTGTATAGCATCTTCAGTAG TGAAGCAGGAGCAGCAGCTAGAACCTGATATTATCAAGATTACTCTGATAGATGATACTGAAATCAAAATATCCTTGACTGGATTGTGTGACAATATATA AAGCAAGAAGGCAGAGATGCCAAAAATGAGAAAACAATGCTTCAATACCGAATTTGATTATTTGGTTGCTGTGGAATTTCACTGTAATCTTACTGACAGA TTAAGGATGATAAACAGTCGCTGCCAGTCACTCACAACTAGCTGGGTCATCATGGTATGCACTGGCCGAGGATCTAAGGAGCAGCTCCTTCCCTCAGATT TTTCAAACAATTCTTACTAATATATAGGTATATTAACAACATCCTTTGTTTAAATTGAAATCCTTTGACTTATGTGAAAATTGAAAACCCAAGAGTTCCT GCTTCTTCCTTGGTGAAAAAACTCAAGCCACTTCCTTATCAAGTCAAGAATCACTTTCCTAGGTTCCCTCTTACTTCTTCCTTTTACCCTTCTCCTTTTC CATTTTTTTAATTTGATACTCTTTTATTTTAATTTGGTACTCTTCTCTTGTTCTCATGATCTTTGCTATTCTTCTTTTTCATTGTACATAATGAATCTTA TTAGTTTTTTATATAAATATTTTCTGATCAATTATTTTTATTTTGAATTTACATGTTACTTTAAAATTTGATATAAAATTATGTATCTTTATATTGCATT GTCATTTTCGGTTTTCTATTAG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_32366; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_163137
| Blastp | Amino acid transporter AVT6A from Arabidopsis with 65.44% of identity |
|---|---|
| Blastx | Amino acid transporter AVT6A from Arabidopsis with 63.28% of identity |
| Eggnog | amino acid transport(COG0814) |
| Kegg | Link to kegg annotations (AT3G30390) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019458312.1) |
| Pfam | Transmembrane amino acid transporter protein (PF01490.17) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |