| Id Trinity | FTRINITY_DN53284_c0_g1_i3 |
|---|---|
| Name Transcript | Ll_transcript_162188 |
| Sequence | CTTGTTCAAAATTCCTTCCTCCATTATCGGGCACACACACACTCTCTCCCTATAACTCACATCATAATGCTCATACAAACACATCACCAAATCAACAATG GCGACGTTATCAGAGACCTACGCTTGTGTCCCCACCACCGAACGTGGCCGCGGCATCCTCATCTCCGGCGACTCCAAATCCAACAACATTCTCTACTGCA CCGCTCGATCAGTCATCATCCGCAATCTCGACAACCCTCTCCAGGTCTCCGTCTACGGCGAGCATGCCTATCCTGTGACGGTGGCTCGTTACTCGCCCAA CGGCGAGTGGATCGCCTCCGCTGACGTGTCTGGTACCGTACGTATTTGGGGGACCCACAATGATTTCGTTTTGAAGAATGAGTTTCGGGTCCTATCGGGT CGGATCGATGATCTTCAATGGTCCCAAGATGGGTTGAGGATCGTTGCATGCGGTGATGGCAAGGGCAAATCATTTGTTCGCGCTTTTATGTGGGATTCAG GTTCCACAGTTGGTGATTTTGATGGCCATTCTCGACGGGTTTTAAGTTGTGCATTCAAACCAACAAGGCCTTTCCGCATTGTCACATGTGGAGAAGACTT TTTAGCCAATTTTTATGAAGGTCCACCATTCAAGTTCAATATGTCCATCAGGGACCATTCGAATTTCGTCAATTGTGTTAGATTTTCTCCTGATGGGAGC AAATTTATTACTGTTAGCTCAGATAGAAAGGGTATTATATATGATGGAAAGACAGGGAACAAACTTGGAGAGTTGTCTGCAGAGGATGGTCACAAGGGCA GCATATATGCTGTTAGTTGGAGTCCTGACAGTAAACAGGTGAGCTCTTGTTTGTGTTTGAATGTTACTGTTTCAAGTTGACTTCATTTAAAAAAATCTCT CAGCCAGAATGTTGTAGGGCGGCCCAGTTCATGAGATTCCCACCTAGTGGGGCATGAGGAGGATAGATATACACACTCTTACCCTCGCAAGTGAAGAGGT TGTTTCCAATATTTGAATCCATGACCTCTAGGTCAGAAGGCAAGCAACCTTACCCATGAGCTCTTGGTTTCTGTTGTTGTAGCCAGAATGTTGTAGACTT GTAGTTTACTATTGTTGCAAGAAGGCAACTTTTATGCCTGTGAAGCATTGTTTAGACCATAATCAATATATTTGTCGAATGGATTACGATGATGACAGAT GGATGATATTTATTTTTTTGCATGCATCTTATGACTTACAAGCAATTACCAATCTCACAGTAAGGAGGAAAATATTTTGATCTTACTTTTGCAGTTTTGC TCCTTTCAATGTTCGGGGCTGCTATTTACATTCTAGTTAAAGTACACATCAATTAATTACAGGTACTTACTGTGTCTGCTGACAAGTCTGCAAAGGTATG GGACATTCTTGAGGATGGTAGTGGCACAGTAAATAAGACCTTGGCTTGTACTGAAACAAGTGGGGTGGAAGACATGCTTGTTGGTTGTCTCTGGCTGAAT GATCATCTTCTTACTATCTCTCTTGGTGGCACTATTTATTTGTATTCTGCTAAGGATTTAGATAAAAGCCCGTTGTCATTATCTGGTCATATGAAAAATA TCACTGTCTTGACTCTGCTCAACCGAAGTGAAAAGATGCTTTTGTCCAGCAGCTATGATGGAGTGATCATTAGATGGATTCCAGGCATTGGATACGGTGG TAAGTACGAGGAGACAAAACAATTTGGATTAATAAAACTGTTAGCAGCTGGCGAAGAAGAAATTATCACTGCTGGATTTGACAACAAGGTATACAGAGTT CCGCTTCTGGGGGATAATTTTGGTCCTGCTGAGCATGTTGATGTTGGAAGTCAGCCTAAGGATTTGAGCCTTGCACTTAATTCCCCTCAAATTGTTCTGA TTGCAATTGAATCTGGGATTGTTTTACTTAATGGTTCAAAAATTGTCTCGACTAAACAACTGGGCTTTGTTGTGACTGCATCTGCTATTTCACCTGATGG CAGTGAAGCAATTGTAGGTGGGCAAGATGGTAAGTTGCATATATATTCTGTCTCAGGAGATACTGTAACAGAAGAAAGTGTCCTTGAGAAGCACCGTGGT GCAATCAGTGTAATCAGATATTCTCCAGACGTTTCCATGTTTGCATCAGCTGATTTGAACCGTGAAGCTGTTGTGTGGGACCGTGCTTCCAAAGAGGTGA AGCTTAATAACATGTTGTTTCACACTGCACGTGTTAATTGCCTAGCGTGGTCACCTGATAGCAGCCTGGTAGCTACGGGTTCGCTTGATACATGTGTTAT CATATATGAAATTGGGAAGCCAGCAGCAAGCCGCAGAACCGTTAAAGGAGCTCATTTAGGTGGAGTATACGGGTTAACTTTTATTGATCAGGAAAGAGTG GTTAGTTCAGGTGAAGATGGATGTGTTCGTGTATGGAGTTTAGTTTCAGAGTAAACTTAGCATCAGAACCTCCCAATGCATCATGCAGTTATGGTAAGAA ATTGATAGTTTTGCTGTCTTATATGATGACCATCAATTTTCTGCACTGGCTATGTAGTGGAACTTTAGTGTCATCTCTTGATAGATTTCTCCTAGGACTG ACAATTTGACACGTCTTATCCAAGCTGGAGTTACATCTGCACTCCCATTTATTGGCAAATAAATTGTCAATAACTTTGTCTTTGTCTAAGCAAAGCCTCA ATGCAAGTAATGAAATAGCACTTTTGTTCCCTTTATTTTGCCTATGAAGGCAATTTTAGTCCTTTAAGGCCTTTAAGTGCCCCCAGATATTTGATTAGAA AGACTGAGTACACTTCCTAAACACCTCATTGCTAATTAAAAAAAATAGAGGGACAAAAGTAATTGTAGATATACTGAATAGAAAATGTTCATGTTGGTAT TAGAATGAAGGTAATCATTTGTTTAATTTTTGAATGATTCTTGACATGTTTGTTAACCCATCCTGCCATCTAGCATAAATGGGAGCATATCCTTTGCAGA ATCTTGACTCGTACTATGAAAGATATGCTATCATTTAAATAGTGGTCTATCAGTACAGAATCTTGGCTTTCTCCTGTGGCAATGCTTCAAATCCAGAATA CAGGAAAAACAGTAGAGAACAGTGGATAATCTCAATCCCACAATATGCTGTCGCCTTACCTTTATTCTTTGACTATATTTTCTTCTTGAGCCAATCTAAT GGCTTCAAAAGTGCCATCATTCTTGTAATTTACTAAGACAGTTCCAGAGAATATATTATTGACAATTAAACTAAGAAGCCATTTCATGAACTATAAGTAG TTCTGTAAGGTTAGGCTAGCATTTTGTTATGTAGAGGTAAATTTCATTTAATTTAATATCTCTAGCTATGTTTTACTCCCATATGGATATTTCTTTAGTG CTGCAAGTGGCATTCACAAGCTTCTGACATATACCCATACTTTTTTCTATTTTCAACACAAATACTTTAACCATGC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_32374; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_162188
| Blastp | Actin-interacting protein 1-2 from Arabidopsis with 63.5% of identity |
|---|---|
| Blastx | Actin-interacting protein 1-2 from Arabidopsis with 63.84% of identity |
| Eggnog | actin filament depolymerization(ENOG410XQN1) |
| Kegg | Link to kegg annotations (AT3G18060) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019441466.1) |
| Pfam | WD domain, G-beta repeat (PF00400.31) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |