| Id Trinity | FTRINITY_DN53297_c4_g2_i3 |
|---|---|
| Name Transcript | Ll_transcript_163369 |
| Sequence | CTCCACCGTATTGATAGCAGTTTAGTTTAGAAAAACCCAAAACCTAAAACTACAAATTCAGAACGAGAGAGAGAGAGCGAAAGAGAAAGAGAAGAAAGAG AGAGAAGCAGTGATGGATTTGGACGATTATGAGGTGCCAACAACAGCACCTTCTCGTGTCTCCAAATTCGCTCCTAAATCCTCCAAGTTCAAACCTAAAC CCAAATCCGAACCTAAACCCGAACTTCAACCCGAACCTCAACCTCAACCCTCCAAGCCTGAGCCACTCGATTTACTTCCCAAAAAGGATGAACTTGACGC TGATTCTTACGTCAAAATCGACGTCGAGGAACCCAAGCATGAGTCTCAACAACGTGCTGAGCCAATGGATGTAGATAGTGCTGACAAAGAAGTAGATGAA GAAGTAGTTGAAGAAGAAGAAGAAGAAGAAGAAGAAGATACTGTCATACGCGAAATCGATGTTCTACTCAGTCCTTCTTTTGATGCTGATGCTCAGTTAT ATGTTTTTCAATATCCCTTGAGAGCTTCGTGGCGACCTTATGATCTAGATGAACAATGCGAAGAGGTTAGGGTGAAACCGGGCACTAAAGAAGTGGAGGT TGATCTACCCATTGATATGAATTCAAGTAATATTGACAAAGACTTTGCAACCAAGCTCAATTTTAAGAAACGGATTTTATCAACTTCGTGGAAGCCACCT TCTGCAAATGGATATGCTGTTGGGCTTCTTATGGGTGATATGTTACACTTGCATCCTGTTGATGCAGTTGTACAGCTTCGACCATCATTCCAACATCTTA ATTCCGGTGGCTCAAAAAAGAAGAGTGTTATCCCCACTGGTGCAAATGCCACTGTCAAAATTGAGGGGTCCATTGAAGAAAAGTCTGTTGTTAAATCAAA GAAGCAGGTGGAATCTTCAATTGAGCAAAAGAGTGATGGTGATGAGTGTTGGGTTCCTCTCAAGTACCATAGCTGCAAGAGTGATCTCTCCTCTAAATAT TTGCAGCAAATGGTGGTGCAAGAAAGGTCTCCTATAAACTTTACAATGAGCCCGGTTGACTATGTTACTACTCTTTGTCCTGGAGTGAGCAACAACGTTT CATCAAAGGGTCCTTCTAAAAGGTCTCTTCTGTTGTTGCCCCCTGAAGTACGTCTTAAGGAATTGCTTGTCAAGGGCCGTCCACTTCACCGTTTCAGTGC TATTAAGCACTTCGCTCCTGAGTACTCTGAGGAGGAACTGCTGGAATTCTTGCAGAAGCATGCAACATTGTTATGGGGACTATGGACTCCGAAAAGTGCA TTACTGTATCCTCAGGGTGGCGTGGAAACTTTGGCTAGAGATTTTGTCCTAGTACTCTTTAGCAAAAAGTTAACAGTTTACTCTTCTGATGTGAATGTTG GAGGTGGTCTTGGTAAGCATATAAAAAACTTCCTGAAGATATTTGGTTTGGAAAGAATAGATCCCCTTAAGTCTGGTGCACAACCAACAATTTACTGGAA ATTCAGTGAGGTCCCCGATGAGCCATTCAAAAAACTTCATCCTGATATTGTTGAAAAGCAAGAAGAAGTTTTGAAATGTTTGGAGCATCAGGTATTTGAG GTTGCTTCTAATGTTGGAAAACGTAAAATTGGTAGAAATGTTGTAGCTGACCACAGAGAAAACACTAAGCTTGGTAAGTCAGCCAATTCTGATCAACCAG TAACAAGTGTTGGTGGAGTGCCTCCTGGGAAGATGACCATGTCAAATGAAATCCAGCACGCTCTGCCAATTGCCATCAAGAAGATTTTTCAGAATCACAA AGTTTGCAGGTATGGTTATACAGACTTCTATCCTTTGCTGATCTCCCATCTTGAAATGATCCCTAATAGAGTCATTTTTTGGAAGTGCGAATAGTATGAA TTAACTGAATACTGATATGAAAGGCCTTAGTTCAACACTTGTGCTACATAATTTGCAATACTCGTATTTAAGGAGTGATTGAAAAGCAAACAATGTTTTC TTTTAATCCTTTTCACCACAAAGTTTTGCTATTACAACATTCTTCTGCTCTAGTTTGAAAGTCAATTAAATGTAGAAGTTGATGATCCCGTTCTAGAGTA ATATAAGATAGAAAAGGGGAAGTAGAAAAGGGAAGGTTATATTATACAGGTCATGAATTGAAGCATGATTATGGTTTCCTTGACAAAGAAAGGAGG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_32464; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_163369
| Blastp | DNA-directed RNA polymerase III subunit RPC5 from Mus with 27.84% of identity |
|---|---|
| Blastx | DNA-directed RNA polymerase III subunit RPC5 from Mus with 26.16% of identity |
| Eggnog | Polymerase (RNA) III (DNA directed) polypeptide E(ENOG410Y1X8) |
| Kegg | Link to kegg annotations (26939) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019426218.1) |
| Pfam | Sin-like protein conserved region (PF04801.12) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |