Id Trinity | FTRINITY_DN53297_c4_g2_i5 |
---|---|
Name Transcript | Ll_transcript_163376 |
Sequence | ATCTTGATATTCTTAAATGATTTCCTGTATAGACTTTTGCTTGCTGATTATGCATAGCATTTACAAATATTATAAACTTTATGGTTTATATATGTTTTGG GTTTTTTCTTTTACAAATATTGTAAATTTGCCTGCCTCTTTCTGGGTTGCAGTTACACTTGCATCCTGTTGATGCAGTTGTACAGCTTCGACCATCATTC CAACATCTTAATTCCGGTGGCTCAAAAAAGAAGAGTGTTATCCCCACTGGTGCAAATGCCACTGTCAAAATTGAGGGGTCCATTGAAGAAAAGTCTGTTG TTAAATCAAAGAAGCAGGTGGAATCTTCAATTGAGCAAAAGAGTGATGGTGATGAGTGTTGGGTTCCTCTCAAGTACCATAGCTGCAAGAGTGATCTCTC CTCTAAATATTTGCAGCAAATGGTGGTGCAAGAAAGGTCTCCTATAAACTTTACAATGAGCCCGGTTGACTATGTTACTACTCTTTGTCCTGGAGTGAGC AACAACGTTTCATCAAAGGGTCCTTCTAAAAGGTCTCTTCTGTTGTTGCCCCCTGAAGTACGTCTTAAGGAATTGCTTGTCAAGGGCCGTCCACTTCACC GTTTCAGTGCTATTAAGCACTTCGCTCCTGAGTACTCTGAGGAGGAACTGCTGGAATTCTTGCAGAAGCATGCAACATTGTTATGGGGACTATGGACTCC GAAAAGTGCATTACTGTATCCTCAGGGTGGCGTGGAAACTTTGGCTAGAGATTTTGTCCTAGTACTCTTTAGCAAAAAGTTAACAGTTTACTCTTCTGAT GTGAATGTTGGAGGTGGTCTTGGTAAGCATATAAAAAACTTCCTGAAGATATTTGGTTTGGAAAGAATAGATCCCCTTAAGTCTGGTGCACAACCAACAA TTTACTGGAAATTCAGTGAGGTCCCCGATGAGCCATTCAAAAAACTTCATCCTGATATTGTTGAAAAGCAAGAAGAAGTTTTGAAATGTTTGGAGCATCA GGTATTTGAGGTTGCTTCTAATGTTGGAAAACGTAAAATTGGTAGAAATGTTGTAGCTGACCACAGAGAAAACACTAAGCTTGGTAAGTCAGCCAATTCT GATCAACCAGTAACAAGTGTTGGTGGAGTGCCTCCTGGGAAGATGACCATGTCAAATGAAATCCAGCACGCTCTGCCAATTGCCATCAAGAAGATTTTTC AGAATCACAAAGTTTGCAGCTTCCAAATGATATGCCAAGGATTGCGTGAAATGGCTGTTTCTAATAGTATTCTTCCGAAGGCAGATTCAAAAGTAGTTTT AGATGCCATTAGTAGTCTTGATGCTTCACCAGATGAGTTGAAGAGTGTCATAGGTGAAGTTGCATGCAGTGTCTGTGGTTCCTATGTGTTAAAATCATCA CCGGATGAACCATTCAGAGATGTTGTAATCAATTGGTTTCGTGGAGGTGGACCCAGGGTCAAGAAGTCTGAGATAATTGAAGCTGCCAGGAGAAAACTCA ATAGGGAGGTCACTAACCTTGAGTATAGCAAGGTCATGAATGAGCTATGTGTCTCAAAAGGTTCTCATTGGGTCATGAAAAGTGGTGATGGAAGTAAGCC ATGATCTCTATTGTGACTTTTTATCTCAAAATTTTGTAATTAGTTTTAAACAATTTAGATGGCTAATGACTTTTACTTTGAATTTTTGACGTATTTTAAA GGGGCACAGAAGATATCATAAATACTTAACCCGTGATTTGTTTATATTTTGCTTTAGTTTTGTTCATACAACACTATCCATTTTAAATTTAAGAGTAGTA CAAGATTACCTTAAATTGTTTAGCTCGAAGTTGTTGTTGCCTTCTAAGCTACGAGCATAAATAAAATTGAAAAAGTAAGATGAGTAGTAGTACTAAACAA GTTCTATAAACTCAAGG BLAST |
Tissue | flowers |
Gene name | LI_gene_32464; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_163376
Blastp | - |
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Blastx | DNA-directed RNA polymerase III subunit RPC5 from Mus with 25.97% of identity |
Eggnog | - |
Kegg | - |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019426218.1) |
Pfam | Sin-like protein conserved region (PF04801.12) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |