| Id Trinity | FTRINITY_DN53309_c0_g4_i6 |
|---|---|
| Name Transcript | Ll_transcript_245078 |
| Sequence | GTAATATCCACAAATTATGTTACACTTGGGATGCGGAATACTCTTTTTCAAACAAACACTCACATCCTCATTCTCATTCATTTGTGGACATTCTTACTCT CAGGAATAGATAAACACAATGATAGCCCTAAATAAGAAACACTATCACCATTTCATTCTCTGTTACAGGACTCACTCACGCTCCTCTAACCCTCCCTTTT TCTCCACCGTTTGTCAGAACAACAACAATCAAGTCTTTATCGTTTCAGAAGAATTTCGTTGAAATAATTAATTTATCAACTTTCAACACCATTAGCACAT AGACACATGCTTTTAGTTTTCTCTTCATGTGTCTTTAGTCCAATATCATCCACCAAACTGTATCATAGGACTGTCCAACATTTTCATGGATTCGAAGATT GAATATAATGAAGAATACAGGAAAAACTCAAGGGGGGTGCAACTTTTCACCTGCAAATGGTTACCAGTTTCTTCTCCAAAGGCCCTCGTTTTCCTTTGCC ATGGTTATGGCATGGAATGTGGTAACTTCATGAAAGAATGTGGAGAAAAGTTAGCTTGTGCCAGATATGCAGTGTTTGGGATGGATTATGAAGGACATGG ACGCTCTGGAGGTGTTCGTTGTTTCATCAATAAGTTTGAAGACATTGTTAATGATTGTTACCACTTTTTCAAATCAATTTGCGAGCTTCAAGAGTACAAA GGCAAGGCCAAATTCTTGTATGGAGAGTCAATGGGAGGCGCAGTGTCCTTACTATTGCATAAAAAAGACCCATCATTATGGGACGGTGCCGTTCTAGTTG CACCCATGTGTAAGATATCAGACAAGGTGAAGCCACATCCCGTTGTTATAAACATATTAACTACAATGGAAGATATTATACCAAAGTGGAAGATAGTTCC ATCTCAGGATGTCATCAATTCAGCCTTCAAAGACCATGCCAAACGAGACAAGATAAGGAAAAACAAGTTGATATACCAAGACAAGCCTAGGCTAAAAACA GGACTAGAAATGCTTAGAGCCAGCATGAATCTTGAAGCCAGATTACATGAGGTGACACTTCCTTTCTTTGTATTACATGGAGAAGCAGATACAGTGACAG ATCCAGAAGTGAGCAAGGCATTATATGAGAAAGCCAGTAGCATAGACAAGACCATGAAGTTGTACCCAGGAATGTGGCATGGATTAACAGCTGGTGAGAC TGATGAAAACATCGAAATTGTTTTTACAGACATCATAGATTGGCTAGACAAGCATGCTAACAAGGCAAATTTTGAGTCATTTCAACCAAATCAAACACAT AACCATGGTACTGATAAAATGACAACATCTGAGGTTAACAAATGGGATGCAGAACAAGCAGGCTTTCTTCGTGATCGCGAGGTTCCACAACGCCGCTTTC TACGCCTCTCATCGATGTGAAGTCATAAACCCACTCTACTGAGAGATACTGTCAACTTTGGGCATGTACCTACAAATTATTCAGAAACTTGTTTTATACC AGTCAACTTCATTTTCTCCATGGTGCACAACCAATAGATTGTTCAAATTGGTTCCTTTGTTCTCATAGATTATATTACTACGTGGAATGATGGGGAATAC AAAACATAATCACCATCATTCAAAGACCAAAATCGAAGTTTGATAAAATAAAGGTAAAATGTAGAAATAGCTATAATTGTAGAATCTTGCACACCCCAAT TACAATCCAAAATTATATAGAAAAAAGAATATAGATTGCAGGAATTGAGAATGGCTAGCTCCAATATTGAAAGAGGGTGATATCCCACATATAAAAGATT GATGAAGAGCAAACAACAGAAGTGACTATTATGCAGAGCTCATAACTAATACACCTATAAGGGATGGGAAACAGACAAGGAGTTTTCAGTATGTTTCTGA TTTGGTGGAGGGCCTAATTCGACTTATGGAAGGAGAACACGTGGGACCTTTCAATCTTGGAAATCCTGGCGAATTTACCATGCTTGAACTTGCCAAGGTG GTCCAAGAAACAATAGACCAAGATGCAAAGATAGAGTACAGGCCCAACACAGAGGATGACCCACACATGAGAAAACCTGATATTACTAAGGCCAAGGACC AACTTGGCTGGGAACCCAAGGTGGACCTTCGCAAGGGTCTCCCTCTAATGGTTTCTGACTTCAGGCAACGCATTTTTGGTGACCACAAAGAAGATGCTAC TACAACCTCTGCCTAATTCTTACATGGACTATGTTATGCATACCTTAATAGTAGAGATTACAGTGAAGGGTGTTTCCCATCCCTTATAGGTGTATTAGTT ATGAGCTCTGCATAATAGTCACTTCTGTTGTTTGCTCTTCATCAATCTTTTATATGTGGGATATCACCCTCTTTCAATATTGGAGCTAGCCATTCTCAAT TCCTGCAATCTATATTCTTTTTTCTATATAATTTTGGATTGTAATTGGGGTGTGCAAGATTCTACAATTATAGCTATTTCTACATTTTACCTTTATTTTA TCAAACTTCGATTTTGGTCTTTGAATGATGGTGATTATGTTTTGTATTCCCCATCATTCCACGTAGTAATATAATCTATGAGAACAAAGGAACCAATTTG AACAATCTATTGGTTGTGCACCATGGAGAAAATGAAGTTGACTGGTATAAAACAAGTTTCTGAATAATTTGTAGGTACATGCCCAAAGTTGACAGTATCT CTCAGTAGAGTGGGTTTATGACTTCACATCGATGAGAGGCGTAGAAAGCGGCGTTGTGGAACCTCGCGATCACGAAGAAAGCCTGCTTGTTCTGCATCCC ATTTGTTAACCTCAGATGTTGTCATTTTATCAGTACCATGGTTATGTGTTTGATTTGGTTGAAATGACTCAAAATTTGCCTTGTTAGCATGCTTGTCTAG CCAATCTATGATGTCTGTAAAAACAATTTCGATGTTTTCATCAGTCTCACCAGCTGTTAATCCATGCCACATTCCTGGGTACAACTTCATGGTCTTGTCT ATGCTACTGGCTTTCTCATATAATGCCTTGCTCACTTCTGGATCTGTCACTGTATCTGCTTCTCCATGTAATACAAAGAAAGGAAGTGTCACCTGCTTAA AACTTAAAGAATGAGGCCCTACATATATAAGCATGGTAATTCATTTCCAGAAGGGAAAAATATAACAAAAACAACTGATTAAGGATT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_32593; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_245078
| Blastp | Caffeoylshikimate esterase from Arabidopsis with 38.27% of identity |
|---|---|
| Blastx | UDP-glucuronic acid decarboxylase 4 from Arabidopsis with 78.12% of identity |
| Eggnog | alpha beta hydrolase fold(COG2267) |
| Kegg | Link to kegg annotations (AT1G52760) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019441744.1) |
| Pfam | Serine aminopeptidase, S33 (PF12146.7) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |