Ll_transcript_246821

• Id Trinity: FTRINITY_DN53310_c5_g5_i2
• Name Transcript: Ll_transcript_246821
• Sequence: CCCACACACACCACAACTACTCACTCACTCTGCCGCCACCAAACTGTCGGCAACGCTCTAACTTCACAATCACAACGGTGGCGCGCCATCCCATTTTCCT TCTAAGAACAATGCAGCGCCACCGTAGCTCCGCCGTGTTGAACCTGAGCTTGCTCTGTTATTGTTTGGTGCTTAAGCAACTCGTGCTGTTATGTGGCGCT GAGGGACTACCTCAGCACCGTCTCCCAGACCTGCATTGGTATCCTGGAACCGCCACCTGGTACGGCGAACCCGAAGGCGACGGCAGCACCGGTGGGGCAT GTGGTTATGGTACCATGGTGGATGTGAAACCGTTCAGGGCGAGGGTAGGGGCGGTGGGGCCGGTGCTGTTCATGAAAGGGGAAGGGTGCGGTGCGTGTTA TAAGGTGAAGTGTTTGGACAAAAACATATGTACGAGACGAGCAGTGACGGTTATAATCACGGACGAGTGCCCAGGTTGTCCCTCAGACCGAACCCACTTT GATCTCAGTGGTGCTGCATTTGGGCGCATGGCTATTACTGGAGAGAATGGTCAACTCAGAAACCGTGGTCAAATTCCAGTCATTTATAGAAGAACCCCGT GTAAATACCCGGGTAAAAAAATTGCTTTCCATGTTAATGAAGGTTCCACTCCTTTTTGGCTATCACTTCTGGTTGAGTTTGAGGATGCTGAAGGAGATAT TGGCTCCATGCATATACGAGAAGCAGGGTCTAGTGAGTGGGTGCAGATGAATCATTTATGGGGTGCAAATTGGTTCATTATTGGAGGACCTTTAAGAGGG CCATTCTCTGTTAAACTAAGCACTTCCACTGGGAGAACCCTCTCTGCTAGAGATGTTGTTCCAGGCAATTGGGTTCCAAAGGCCACTTACAC
• Tissue: flowers
• Gene name: LI_gene_32612;
• Additional information: details;

Expression of Ll_transcript_246821

FPKM

• FPAB: 0.7
• FPNAB: 11.4
• LF1: 11.7
• LF2: 5
• LF3: 6.5
• LF4: 7.6
• UF1: 10.4
• UF2: 5.7
• UF3: 4.8
• UF4: 7.8

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_246821

• Blastp: Expansin-B3 from Arabidopsis with 72.18% of identity
• Blastx: Expansin-B3 from Arabidopsis with 78.18% of identity
• Eggnog: May cause loosening and extension of plant cell walls by disrupting non-covalent bonding between cellulose microfibrils and matrix glucans. No enzymatic activity has been found. May be required for rapid internodal elongation in deepwater rice during submergence (By similarity)(ENOG410YA5Q)
• Kegg: Link to kegg annotations (AT4G28250)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019454372.1)
• Pfam: Lytic transglycolase (PF03330.17)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;