| Id Trinity | FTRINITY_DN53310_c7_g1_i2 |
|---|---|
| Name Transcript | Ll_transcript_246838 |
| Sequence | AGATAACAGATTTATACATGCCGAAGGATCAAGGATCAAAAGCACATCGTGGAATTGGTTTTATCACTTTCGCAAATGCAGGTTTGGCCATCTATGTTTG CTTGTCTGCTAGAATCGTCCACATGTATTAAGTGTACGATTGTATCATATCTTAATTATGCTTTAATTGATAATTTTTAATTGGGATAGTTAACTTGGAT CTTGACTGACACTGGCAAATGAAGAACTTTGAGAGTACTTGCTGAAGCAGGGATGATATGCCCTTTTTCCCGATAAATAAATTTATAAAACGGAGTTGAT ATTGGCAGTTCACTTAAATTATGTCTTGATGTTAACATAATGGTTGGTTATAGCATCACTTCACTCCAACGACTATTTTCATTGTGCATGAAATCCTACC TCATTATTAAATTGATTCCAACACAAATAGACACATGTATCTTCGTTTATGGTGGAGATGAACTTCATATTTATTTGACCTATTGTTGGCTGAGAATTTT GTAGGAATTAGGTTAAGTTAAATTGTTCGGTGTTTAGTAATAAGTTTTTGTCACATCTGTTTGCATTTGGCATATTTCACATATAACTTCGTCTTCTGTT CAATGTCCATTTCATGCTTAGGTTTGTTTTTTATTATGGATTATGCTATATTGCGGATCTTTCTCAGCAAATCTAAATGATGTAATTGCACTACTCTTGC ATGATAAAGGACATGAAAGTCTGTCATCAATTGCTGTAAGGAAGATATTCTTTTTTGCAGATTCTGTAGAGAATTTGATGGTAGAAACCCATGAACTAGG CGGTTCCACTGTGGTGGTTGATCGAGCAACACCTAAGGCAAGATTAATTTTTTTTGAAAGATAACAAGATTATTTGGAGCATGTTCATTTACCAATTAAA AAAAGATTGTGCAAATTCCTTGTAAATTTATTCTCATGACCATTTTTATTGGTCATTCTGTTGAAGTAATCATCTATCGCAACAGGATTGCAATAACCAT AAAAGCAGTGCTTTGTGCACGTAAGTCGCCATTAAGTTAAAAATAACAAAAGTTTTTTTCCCACTAGGTGGGTTGGCTACATGGATCAAATGATGCCATT GTGTTTTGTCATAAAGATTATTTTGGAAAAACTGTTTAAATTTAACTCTTTTTAATGGTTTTTCTAGGATTTTTCTTTGACTTTCTTTGACTTCCTTTTG GATAGCTCAACATGTTAAAAAGTCACCATTTTGAAAAACAATACCATCGTATTTCTAATTAAGTAAAGAATTTCTTAGTTATAAAATTTAATGCGAGAAC ACTTTATCTAAGACTTATAAAATTTGGTTGCCATAGATCTGTAAGTCACAGCCTTTTTAATCTTTCAGTGAGTTTAGAGAACAGCTTCCATTTTGATTTT TAGGATCTGGTATGCACTTAAGCAGTTGAATATTAGATGGATAATAAATAGATAGATGTATTAGGGTCTGGGATGTACTAATATCAATGCATCTTGGGAC ATGTCACAGAGCCACTCAACCTAAGAATTTTTCTACTAGACATGAATCACATGATAGTCACTACGTTTGTCATTTCCACTCATGTTTATTGTATGTTATT GGTTTTAACCCACTGCTTAAACATTTGTACTTGTATGTTGTCTTTTCTCACACTTCCTAAAATTTCTGGGTTTGTCATTGATCAAGCGTGCAGCAGATTT CAGTTTCACATGTTAGTTTGATGATGGAAAGATAGTTGATAAACATACTTTTTCGTATGATTTTTGTTAATAAGGTTTTTGCAATTTTGACAGGAAGATG ACTTTAAGCCAATTGGTAGAATGCCACACTCACACATACGTTCACATTCACACTCACACTCACACTCACACTCACAGGGAGGATATGGTGCTTACGATGC ATATATTTCTGCAACAACTAGATATGCAGCACTTGGTGCTCCTACTTTGTATGATCGTCCAGGCCCCATTTATGGAAGGAGTGAACCTGTTCGTGGAATG GGCAACAAGATTTTTGTTGGCCGCCTTCCCCAAGAGGCAACCAGTGATGATCTTCGTCATTATTTTGGAAGATTTGGCCGTATATTAGATGCATATATTC CCAGGGATCCTAAGAGATCAGGTCATAGAGGTTTTGGTTTTGTTACTTTTGCTGAAGACGGTGTGGCGGATCGTGTGTCTCGAAGGTCTCACGAAATCTG TGGACATCAGGTGGCAATTGATTCAGCTACACCTCTTGATGATGCTGGACCTGGGGCTGGACCTAGACCTCCTGGTGGGAATTTTATGTTGAACAGCATG GATGCTTATGGGGGATTCGGTGGTCCTATGCGAACTTATGGGAGAATGTATGGCAGCCTGGACTTCGATGATTGGGGTTATGGAGTTTCCAGTTCCAGAC CATCAAGATCAGATTGGAGGTATAGACCATACTAGGGGAGCACTGTTTTAATAGCAGCACTGCCTTTCAAATTCTCTCAACTATGGGTACCAGGAACTGT TTTGCATGTCTTGTATTAAGAATGGTTTCAAGTTATTACCTGTGATGACACTAAAGACATTTGTTGCTTGTGATTTATCCTAGCATCACTGTTGCAATTT CGGTCCTTCTGTGAACTTTCATTGTGACACATTCATGATGTAGAATAAGTTACAACATATCTGGCTTGACTTTTCAGCAGCCTGGGATGTTTTGTTTTAG CCTGTTTAGTATGTTCCATTTTGGAACACTATTGCTGTTTGTGATTAGTTGAATACATCTAATAACACTAAATAGCACAGAATTGAAAATGACTTTTTTA ATTCAAATATTTACAAGGGAA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_32620; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_246838
| Blastp | Heterogeneous nuclear ribonucleoprotein 27C from Sophophora with 37% of identity |
|---|---|
| Blastx | Heterogeneous nuclear ribonucleoprotein A/B from Mus with 41.18% of identity |
| Eggnog | Rna-binding protein(ENOG410YA8Z) |
| Kegg | Link to kegg annotations (Dmel_CG10377) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019446782.1) |
| Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (PF00076.21) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |