Id Trinity | FTRINITY_DN53315_c0_g2_i3 |
---|---|
Name Transcript | Ll_transcript_246591 |
Sequence | CTACACAGCCCTCAATCTCAATTCTCATGCTATGTGCTGATCACTGCGCCGTCGAACATATTTGCCTGAGATTCCATCATGGCTATCAAACGTAAGAAAA AGACAGCAACAAGCGATAAATCGAAGAAGACGAAGATGATTCAGAAAACAACACCGCCTCCTTCCCCGGAACCAGAGAGTCCTATTAGGGCCATAGTTTG TCTTAAACAAATCTGCGATATGAAACGTTTCGAGGACACCGAGGATTGTTTCATCTTAGGATTCGATCCTACTGAGGATGTTGTCACGTCTAAGCTCTCG TTGGACAATAATCAACCTCTCTCTGATGATGTATCCATCATTTATGAAAAGGGCCAGGTGGCCTGCAGAGATTTTCCACATTCAAGGCATCTATGTTCCA AATTTCCTTTTAAGACCACACCTCATGAGATCCATTGTAAAATGTGCTACTGTTATGTCTGTGATACGGCTGCCCCCTGCTCGTACTGGATGCTTGCCCA GCATTGCAATGCAGAGAATGTTGATGGCTGGATTAATCAGAGGAGGAATGTGAAGAAACAAATTCCAGAAGCGGCAGCTACTCGTTGCCCGTAAATATTA TAAAAACTTGTTTGAATTTGTAGTGTGCACTGTACAGTCAGAGGGTATTTTTAGACTCAAATAGTATTATGTTGTCAAATTCAAACTTGGATTTGGCACT TAGATAATCTTTTTTCTAGACATGGTGTTGCCAGATATTCTTATATAAAACATGTGAAACTCGAATAGTTTATTTTTGGTCTGTTCACATGGTCAGTGTA GACTGGGATTAGGTGAATGTCAGACTCAGCTGTTACTGGATCTATGGGATTCTTCATGGTGAATGCACAAGAAAACATCTACTGGGAAGAGTTATATTTA AGCTTCTGCACAAATTCTTTTTACAATTACTAGTTTAAGGCCGTGAGAGTGCAAGAGGCCCACTTTGTTTCTTCATACATTTAGGCACTTGGAACTAGAA GAAAGATGTTTGTGTTTTGTGTCCTCACTAGGTGTGTGATGTTAAACTCCAAGCAACAGTGCATGCAGCATGACAAGGGTCCCGATTTTCGGTCGAACAT CAATAACGCAACTGATTTGGAGTCGTCACCATGTTTTTACGGCCCCGTCGTTGACACACCCACCGAGGTCGAAACCGAACAACAACTTCCCTCCGTCGAT GAAGTCACAATCCAGAAGAAGAACCCTCAGCCCCAGGAAGAAGATGCTCCTGTTGTGGAGGACGTGAAAGACGATGACGGTGATGAGGATGATGATGAAG ATGATGATGATGACAAGGACGATGGTGCTCAAGGTTCAGGTGAGGGTTCAAAGCAGAGCAGAAGTGAGAAGAAGAGTCGAAAAGCAATGTTGAAGCTTGG ACTGAAACCCGTTACTGGTGTTAGCAGAGTCACAATCAAGAGAACAAAAAATGTCCTCTTTTTCATTTCTAAACCTGATGTCTTCAAGAGTCCACATTCT GAGACCTATGTCATATTTGGGGAGGCAAAAATCGAAGACTTGAGCTCTCAGTTGCAGTCACAAGCAGCTCAGCAGTTCAGGGTGCCCGATGTGGGATCCA TAACTGCAAAACCAGATGAAGGTGCTGCTGCTGAAGCAGCACAACCTGATGATGAAGAAGAGGAGGTTGATGAAACTGGTGTAGCTCCCCACGACATTGA TCTGGTCATGACACAGGCGGGAGTGGCAAGAAACAAGGCTGTCAGGGCTCTGAAGAATCATGATGGTGACATTGTTAGCGCCATCATGGAACTCACCACT TAATCAACCTTTGTTCTTTGTTTTTAGATTTGGGGTTGGTTTTGGAAGCAGCGCCATCCTCACCATATAAAAATGTCAGCTGCTATGTGTTTGGTGTCAC CTTATAAGTTTGTTGCATTCATAAAATTTCTGGGACTAGATGATGATCACATTATTGTTGCCCTGTATCTTTTATTTTTGTTTTAGAAAAAAAACTGGTA ATCAACCTTCAATATCCCTGTTTCTATGCACCAGATAAGATGACTTTATTGTCATATAATGCCTGCTACATTTGTCATGCACCAGATAAGATGACTTTAT TGTCATATAATGCCTGCTACATTTGGCATGGCCCTGCCCTCGGCCTTCATAAAACTAGCAGCAGTCAAGCTAGGAATTTGATTGGGTCAATAAATAATAT AGTAAAAGAGATAGTGGTAGAGATTGCTAAAAATGTCCATCAAGATTATAGTGATTGCTTTTCTTCTCATTCTTTCTCTATTGGAGTGGCTTTGGCTAGT ACCTACCGGTGTCGTCCTGAGATTGGTTGGGTGAAACATAATGTAGATGGTAGTTGTTTAATTTGAGATCAAATTATTGGAGGAGGGTAGCAATCACTAA TCATCTCGACTTGTGGCTTTCTTGATTACGACTAGTGGCTTTCTTGTTTTTCTACC BLAST |
Tissue | flowers |
Gene name | LI_gene_32650; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_246591
Blastp | Nascent polypeptide-associated complex subunit alpha-like protein 2 from Arabidopsis with 74.47% of identity |
---|---|
Blastx | Nascent polypeptide-associated complex subunit alpha-like protein 2 from Arabidopsis with 78.42% of identity |
Eggnog | nascent polypeptide-associated complex(COG1308) |
Kegg | Link to kegg annotations (AT3G49470) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019416553.1) |
Pfam | NAC domain (PF01849.17) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |