Id Trinity | FTRINITY_DN53320_c2_g6_i1 |
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Name Transcript | Ll_transcript_246318 |
Sequence | ATTTATTTTCTGTTGCTGGTCTTTCTCAGCCTTTGGTTATCTGACAAAGCCATTCATTCATTTTCCTTTTATCGAGTTTCTAAGCGCAGTGACCAACGCT AACATCAGATACTCATTCCAACCTCGCATGCTTTCTTCTCTTTCTTTTCAATGAAGCTCCAAACCCTACTCATCACTTCTCAAAACTTATGGAGAGTGTT GCAACCAACCAAAACATTCAATTGTTTTGTGGTTCTGTCATATGTCTTCTTTTGCCTCGTTGCATATGGGTTGTGCTCTGCAAATGGGATACAAAATCCA CCAGAAGGGCATGATGGCTGTGCATCTTTTGGAAAAAGTTACAATTTGGGTTTTCCAGACACCATCGTTGGTGATACTAGTGTAGGCTATGGATCTCCAA TAATCCATAGAAGTTCTGAAAGTGTTTGTCCAGACAATCATTTATTCTGCTTTCCTTCAGCATTATCTGGATTTAATCTCGAGGAGAGAAGTATAAAATC AGCTTCTGCAGGTGATTCCGGTAGTCAGTACAGTGGTCTATGTCGTGTAGGGTTAGATGAAGATATCAAGCAGGGTAGCAATATTAGCTGGTTATCTGAC TATGGTTTGTTCAAGTTGCTTAATGGCGGGGTCGCTTCTTGTTCTTTGAACTCGAGACAACGAGCTAGCGATGTACCATCTCTTCAAACTGAGGGTCATA ACAATGATATTTCTTGCTGTGGATGCTCTTTACATAAGCAAAAGACACCATCACATTCTTTGTCAGAGCATGTTGAAATGTCCAAATCAAGTTCCTTTGA TGCTTCCTCTTCTCCCAATGTAAGGATTGATCCTACTGTGCTGGACTGGGGACAAGAATATTTGTATTCTCCATCAGTAGCTTTCTTAACTGTGACGAAT AACTGCAACGATAACATATTACACCTCTATGAACCATTCAGCAATGACTTACAGTTCTACTCTTGTAACTTCAGTGAGGTTTCACTAGGACCTGGTGAAT CATCTTTGATTTGTTTTGTTTTCTTCCCTAGATGCCTGGGTTTGTCATCAGCTGACCTGATTTTGCAGACAAGTGCTGGTGGATTCATAATAGAAGCTAA AGGATACGCTACCGAATCTCCCTTTGGAATTCAGCCACTATTAGGTTTGGAAATTTCTCCTGGTGGAAGGTTGAACATGAATCTCATACTGTCAAATCCA TTTGATGAAACCCTTTTTGTGGAGGAAGTAACTGCTTCTGTATCAGTTTCTGTAGGACATAATTTTATTGAAACTGAAGCAACTTGTGGTGTAAATAATT TTCATGTTTTTGGTAATATTATCTCCCGTACTATTAAGAACCTCTTGGTTGTTAAGAGTAGTCAGATTGGTTCACCAGTGATAGCAATCAAGCCTCATAG GAACTGGGAGATTGGTCCACATACCTCTGAAACTCTAATGGACATAGATATTACAGTTGGAGTTGAAGGGAAAATTTTTGGTGCATATTGTTTGCATTTA AGGAGGTACTCACAAGACATGTCTGATATTATTGTGGTTCCTATTGAAGCTGAAGTGGATAGTCATTTTGGCAATCATATGGCTCTTGTGTTTGTTTCGG CAACACTTGAGGGTCTAGCAGCATGTGAAGGAGGAGAAAGTGTTATTACTATTTCTCTAAGGAATTATGGCCCATGTGTTTTGAGTTTTGTTATGGCTCA AGTTTCTGACACTGAGCTTTTTCATATTAAGTACATGGATGGTTTGTTGCTTTTCCCTGGCACTGTTACACAAGTTGGCACCATTTATTGTAATCTCGAC ATGCCACCTAAAGTGTCCAACTTGCAAGAGAACTGCAAATTGGTTATTCTTACAAATGACTCAACTAGCCCCCAAATTGAGATTATGTGTGAGGACATAC TACATGTTTATTTTGAACATCAAAGACATTTATCTGTTGAAGTGGAACAGGAGTCTAAAGTCATAGAATCTGGAAATACGGGGGCATGGTATGAGGACAG AAACAGACAATCATCTCAAAATGTCAAGGTTATAGAGACAGCTGATTTAGATGAATTAGTTCTTCGAAACTGGATGTCTCAAGGAACCAGTACTGGCATG TCCGTGCTTGAAGACCATGGGGATCTATTCCCAATGGTTCAAGTTGGAAGTTATGTCTCTAGGTGGATCACTGTAAAGAATCCTAGCCAACATCCAGTTA TGCTGCAGCTTATCCTGAACCCGGGAGAAATAATTGATGAATGCAGGGGTCCGAATGATTTATTCTGCCCCTCTTCATTTGGTTTAGTTCTAGATGAAGC TACCACTCCAGCAAAGTATGGTTTCTCAGTACCAGACAGTGCAGTGACTGAGGCTTATTTACACCCTTACGATAACTTAACTTTAGGGCCAATAATATTT TATCCATCCAAGCTATGTGGGTGGACTGGTTCAGCATTGATTAGAAACAACCTTTCAGGTGTTGAATGGATACCTTTAAAGGGCTTTGGAGGGCTGGTTT CGCTAGTTTTGCTCGAGGGGTCTGAGCATGTCCACGGTATAAATTTTGATCTTAAAATGCCCAAGACCCTCAATTTCTCTCTTCCATATGCCTTTTTTCA CATGAAAGAGATGACTTCTGCATGTTCACAACCTTTAATGAAAGAGCTATATGCCAAGAACACAGGGGACTTGCGATTGGAGGTGAAAACAGTCAGAGTT TCTGGGAGCGAATGTGGGTTGGATGGTTTTAAGATTCATGCTTGTAAAGGTTTTGTTCTTCAACCTGGGGAGTCAACCAAGCTTCTGATATCTTACCAAA CTGATTTTTCTGCTGCTGTGGTGCATCGAGATCTTGAAATTGTTTTGGCTACTGGTATTTTTCTGATACCTATGGAAGCAAGTTTCCCTTATGATGTGCA GAGTAACTGCAAGAAATCCATCTTTTGGATGCGAGTAAAAAAGTGGATCCTTGGATTCCTCCTGGTTGCATCCTTAATTTTACTTGTATTTTGTTTCATA TTTCCCCAAACTGTTCCCTTGGGCAACTTGGATTACTCGTGCAAGAGTGACGATAACTCCATCCACATAACCACAAAATGTGCAGGGAAATCCCCTCTAC TTCATTGTAACCAGAGAAAGAGTAAGTTATCTATGTCCGGCAAGATGAGTAATCTGTTTTGCTCAGTTGAAAAAGACACAACTTCAACAATGCAAGCCCC TTGGAGCAGATATTCTTATGGCCGAGGTCAACCCTCTGAACACGAAATATCTCAACATTTGATCCAGACTTCAGAAAATTGTAGACAGAATAATCATTTG TTGGATACTCCAGATGGAATGGTATCCCCACCAACTGCAGTTCAGAGCTCTGATACAACAAAAGCATCATCCCAACCGGGTAATCTGATCGTCAAAACTG GAAAAGAAAAAAGCAGGAGGAGAAAGAAGAAAAGTCTTGGTGCAAAATTAGCATCGTTATCTGAAGTTTCAAGTAGTCATAGTGGAAACTCTACACCCTC ACCCCCCTTATCCCCAGCTGTATCTGCATCGTTGAAAAGCAATTGGCCGTTGTCTCTCAATGTGGAGCAACCCTACCTTGAGGCGCATCAGTTAGTTACT CAGGTACATGCCAAAGATCCTTATAGCTACAAAGCTTCTGCCTCTACTGCTAAAACAAATGTATTGGAGCCTAAGGTTCCAGTGAAGTTGAGCAGTAACA AAAAAGTTTCTTCTCCCCAAGTGCCTCACTCAGTTTCGACAAAAGCTGCTACTATACCTGTTAAGATACCTCCTGCTCCTTGTCCCCTGCCTGACAAACC TTCAGCATTCTCCTCGGTGCGGACATCTACTGTTACCGTAGTTGCTCGAGCTCCCGGATTGATAGTTGAGAAGCAAAAGGGTGGCGTCGAAGCACCAAAG GTAGGAGTTGCAGATGAGTATGCATATGATATTTGGGGCAACCATCTTTCTTGGATTCATTTGTTAGTTCCAAAAAATGTCACTTGCATGAAGTCAATTC CTGCTGAAAAGAATTTTGACAGCTTCTTTGTAAAGGGGCCATTAACCCTTATGCCAAATTCTCAAGCAGGGTAATAATAAAATGATAAACACAGTTCCTT AATGTTTTCTTGCATCCACTTCTAACTCCATATCTAACTAAAAAAAATGATAAATCATGCAGTCAAACTCACTATAGCATGAGTTTATTTTTTAAGTGCA TATTTGAAATAGAAAATCTTATTAATTTGG BLAST |
Tissue | flowers |
Gene name | LI_gene_32688; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_246318
Blastp | Transmembrane protein 131-like from Homo with 24.13% of identity |
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Blastx | Transmembrane protein 131 from Homo with 29.06% of identity |
Eggnog | NA(ENOG410Z7NH) |
Kegg | Link to kegg annotations (23240) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019431577.1) |
Pfam | Transmembrane protein 131-like (PF12371.7) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |