| Id Trinity | FTRINITY_DN53325_c2_g4_i3 |
|---|---|
| Name Transcript | Ll_transcript_244954 |
| Sequence | CCCGTTCATTCTGTGAGAGGAGTATATATTGCAGTATAATTTTCCCATTTTTATTGGCATTGAATGTGTTATATTGAGTAAGATAATAATGTATAAAAGG TGGAAGCGGCATTAGATATTTGATTGTTGATGATGGAAAGAAGAAAGAGGGAGAAGGAGAAGGAGAATGATCTAGTGTGGAATTCGATTCGAGGTCGTAA CTGTCCAATATGTTTGACGCATCTACAACCTCGTTACAATGAAGTTGCGGTTCTAACGCGTTGTTACCACGCTTACTGCACTCAATGCATTGCGCGTTGG AGTCAGCTCCGTAGAATTTGCCCTCTTTGCAATTCACTCTTCAATTCTTGGTTCTCAATCCTCAACCTTTCCTTCCGCAAACACTTCTTACCGCCACTTC ATGCTTCCCAACCACGCCTTCCCATTACCACAAGAAGAATTGTTGGTAGAAGAATAAGAAGGGTTGATAGGAGGGCATTGCAATGGCGAAGATCATTCGG TAATCCGGCTTCTGTCACTGCACTTGTTATTGCTCAGAGGAAACTGGAATGGCGAGCCAGCATATACAACAATATTGGATTGCAACCTGATCCCACAACC CTAAGGTGTCTTGAGGCAAGATGCAACGGCTGCAGTCCGTGCAAATTGTTCCTTTCCATGCTACAACAACACCCCTCTCCGAATAAATCCAGAAAAGATG CTCTAAAAAATGAAATTCTACAACGGATTAAGCCATGGATAAAGAGGGAGCTAGAAGCTGTCCTTGGAGACCCAGATCCTACTGTCATTGTTCATGTCGT GACCTCACAGTTCATTGCTTGGCTAGAAGAGAAAGCTAGAATGCCATCTGGGCAGTGTGATGTTGGAAATGACTTCATTCATCCTCTTCGGCCATTCCTG CATGATAAAGCCAGTACCTTCTGGCATGAACTAAGGTGCTGAATTCTAATATTTATTTATAGTTGAGTACTTTTCATGTGTTGTAGTCACTGAATTTTTG TGCTGTGATCCTGTCCAATATGATTTAATGATTTAACATTTGTACTCGAAGGCGTAATTATTTTGGTAAGATACTCCAAGGAGCCTTTCTGTTTTGTGTT ATGTCAACATTGAATACTTTATGTAGATCAATTTTTCTTTGATGATTTCAGAAATAGCATGGCAGGAGCTTTTTATTTATTTATTTAACTTAATGAAGAT CACTCTTTAAAGGAAGTGAAAATTTGGTTTATTGCATGCTGTACCATTTTGCATCTTTTTTTTGTCAATTTGCTTCTTCCATCTTTATGTTTTGTGGAGA AATGAATAGATGATCCATCCTTTGTTTAATTGTATTTCTTTTTCTTGTACCAATTCTCCTGATCAAATCATTTTCTGTTGCATCTTCTGATCATTTTCCA ATTGTTTTGCCACCAGCTGTTTTGGGGAGAGTTGCTACAACATGGAAACCTATGATGCAGTGGTTCAATATAGGCATCTGGAGTGAATGGAACAGAAATT ACTTCGACCAATTGCAGTCTCGATGGTTTTTAGTATATTGTAGATGCAGTGGGTATAAGATATTAGAGTATCTAAGACTTCCATCATTCCATGTATGATA TAAAAATTGTTACCCAAGGAAAGACAATGTAATTTATGCAAGTTGCAAAAGCTTGTTTCTTAAACTCTCATCCCAAAATGTAATTTATGCAAGTTACGAA AGCTTGTTTAATGTGAGTTTTTTTGTAAACATTATGTCATATTTGAGCTATTGGGAATGAGCAAGTAATGAACATCATCACTAGCAGAGATAAACCAATC ATGGCACGCATTTTTGCTGAAATAAAGAAAAACCCATGTTGGAAACAAGGGCTAGAATATACTAAACGTTTATGTGTGATTTAACATTCAGATAAACATA ATTATTTCAC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_32738; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_244954
| Blastp | E3 ubiquitin-protein ligase Topors from Mus with 25.83% of identity |
|---|---|
| Blastx | E3 ubiquitin-protein ligase Topors from Mus with 36.23% of identity |
| Eggnog | topoisomerase I binding, arginine serine-rich, E3 ubiquitin protein ligase(ENOG410XQZR) |
| Kegg | Link to kegg annotations (106021) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019437650.1) |
| Pfam | Ring finger domain (PF13639.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |