Ll_transcript_244754

• Id Trinity: FTRINITY_DN53326_c1_g2_i3
• Name Transcript: Ll_transcript_244754
• Sequence: TTTTCCCATAATATTAACGTTTTTGCTCTGCTAAATTTCTTCGGTATGCAAATTGGTTAGGCTAAAACCCTCAAACCCTAGGTTCACAACACAAGTACCA CATCTTCACTTCACGCTGTGTTTTGTGTTGTCATCTTTTTTATGCACACAAGGTGTTTGAAGAAACGGGTAGTTGAAAGAACAGCATAATATTATTACTA GTCTCAGTGATTTTGTTTTTTCTGAGTTTGTAGTTATCTAATAAGTGGTATAGCATGGGCAAAGCATCAAGGGATAAAAGGGATATTTATTACCGGAAAG CAAAAGAAGAAGGTTGGCGTGCTCGTAGTGCCTTTAAATTGCTTCAGATAGATGAAGAATTCAACATTTTTGAAGGAGTGAAACGTGTTGTAGATTTATG TGCTGCCCCAGGTAGCTGGAGTCAGGTTTTGAGCCGTAAGTTGTATCTCCCAGCCAAGCTTGCACCTGATGAAAAGGATGGAATTATTCCTCTTATTGTA GCTATTGATTTGCAGCCAATGGCTCCGATTGAAGGTGTTATTCAAGTTCAGGGTGATATAACTAATGCGCGAACTGCTGAAGTGGTCATTAGACATTTTG ATGGTTGCAAGGCTGACCTAGTTGTGTGTGATGGCGCTCCCGATGTTACTGGACTTCATGACATGGATGAATTTGTTCAGTCTCAACTCATACTTGCAGG GCTAACAATTGTTACCAATGTACTTAAGGAAGGAGGGAAGTTTATTGCAAAGATATTTAGAGGAAAAGACACAAGCCTTCTATACTGTCAGCTAAAATTA TTTTTCCCTGTAGTGACTTTCGCAAAACCGAAAAGTAGCCGCAATTCCAGCATAGAGGCATTTGCAGTTTGTGAAAACTATTCCCCTCCTGAAGGGTTCA ATCCAAAAGATCTTCATCGACTTCTTGAGAAGGTTGGAAGTCCCTCTGGGGTAGAAGACACAGATTGCTGCAGTGGGTGGTTGGAAGGCCCTAATAAGGT ATATATCCCATTTCTAGCTTGTGGGGACCTTAGTGGGTATGATTCTGATCGCTCATATCCACTGCCTAAAGTTGCTGGAGGAACTTATCAGAGCTTAGAT CCTGTTCAACCTCCTATTGCTCCTCCTTACAAAAGAGCTCTGGAATTGAAAAAAGCATCTAGTCAAGGAATCTGACAAGTTGAAAATCTCTCATTGGATT CTTGATCATGTTTTGCATTGATAATCCCATTTAGAATCTTTGCTTTTTCTAACATGGATAAGATTAGTGGATTCACAATTATTACTAGACGTGTGAACTT TAATGCTTTATGTTCTGCTTGTACCATCATTGAGTCCTTTTTTGTCACCATGTTTTAAGTTAATACTCTTTCCATAAAGATAATACAAATTTATACTATC TTGAGGCAAATTTCAGCTTTGATGCAACGGTAACGTTACGTAGTTACCTATCTTGTGAGTTCAAATCCTGTAAATAGTTTCTTCATTTGTGGAGATAAGA CTGAGTATATATCCTCATCAGATTTCACTAAGTGGAAGTCTCGTATATTAGGTTGCGTCTTTTTTTACCCTCGAAAACTATTCTACTGGATGATGAAAGA TTGCTGCTTTAGTGAAGCTCTTTCAACCAAAACAAGACAAAAGGACATGATAAAAAAGGTATCAGTTTATTTCTACTAGGAAGAAGAAAACAGTTGGTGG GTCCAGTATCTTCTTTTCTTTTTTGTAATGCTTCAGAATCATTGCATATTTGCATTGCATTTGATGGTGCATATATCATCAAAAAGCAAACTTTATGTCT AAGGAACATTAAACTTTATAGTGC
• Tissue: flowers
• Gene name: LI_gene_32746;
• Additional information: details;

Expression of Ll_transcript_244754

FPKM

• FPAB: 3.1
• FPNAB: 6.4
• LF1: 5
• LF2: 4.8
• LF3: 5.4
• LF4: 5.5
• UF1: 4.9
• UF2: 4.9
• UF3: 5.3
• UF4: 5.5

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_244754

• Blastp: Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase from Homo with 59.33% of identity
• Blastx: Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase from Homo with 59.33% of identity
• Eggnog: Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit (By similarity)(COG0293)
• Kegg: Link to kegg annotations (24140)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019465097.1)
• Pfam: FtsJ-like methyltransferase (PF01728.18)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;