| Id Trinity | FTRINITY_DN53328_c5_g2_i1 |
|---|---|
| Name Transcript | Ll_transcript_244532 |
| Sequence | CTCCAAGTACAAGCATCTGGTATCCTTATTGTGTTAGTCATATACTTGTTTAGTGAAGAACTGATCACACATTTGAGGTCTTGTAAGGCTATGGAAAACT TACACTCAGAGGCTAAGGAGATCATGAAGGGAACAAACACTGAAGATGATAATATCATAATAAACCCTGAGTTTGAGGATGGCCTGAATAATTGGTCAGG AAGAGGGTGCAAAATTGTATTGCATGAATCCATGGGTAATGGCAAAATCCTTCCAAAGTCTGGCAAGTTCTTTGCATCTGCAACAGAACGGACACAAAAC TGGAATGGAATTCAGCAAGAGATCACGACACGAGTCCAGCGCAAACTGGCCTATGAGGTCACCGCTTTGGTTCGGATATTCGGCAACAATGTCACCACTT CTGATGTACGAGCTACTTTGTATGTTCAAACACCAGATTTTCGAGAGCAGTACATAGGCATTGCCAATGTGCAGGCAACAGATAAAGATTGGACTCAAAT GCAGGGGAAGTTCCTTCTAAATGGTTCCCCATCAAAAGTGTTTGTTTATTTGGAAGGTCCCCCTTCAGGCACAGACATTCTTCTCAATACTTTGGTTATA AAGCATGCTCCTAAAACACCTCCTTCTACACCCCCTGATTTTGAGGATGCTGCATTTGGGATTAATATAATAGAAAACAGTGATATGGGTAAGGGAACCA ATGGATGGTTTCCACTTGGTAATTGTACATTGAGTGTAGGAACTGGTTCTCCACGCATAATTCCAGCAATGGCAAGAGACTCTCTTGGGCCTCATGAACC CTTAAGTGGGCATTACATACTTGTAACCAACCGTACACAAACATGGATGGGTCCAGCTCAGATGATCACAGAGAAATTGAAACTGTTTCTAACTTACCAA GTATCTGCTTGGGTCAGAATTGGTTCAGGATCCAGTGGGCCTCAGAATGTGAATATTGCTCTCAGTGTTGATGACCAATGGGTCAATGGAGGACAAGTTG AGGTGGCTGATGGAAAATGGCATGAAATTGGAGGGTCCTTTAGAATTGAAAAGGTGCCATCAAAGGTTATGGTTTATATCCAAGGTCCTGCTTCTGGTAT TGACTTAATGATTGCTGGACTTCAAATTTTCCCTGTTCATAGACAAGCCAGGTTTAGATATTTAAGGATGCAGACAGACAAGATCCGCAAGCGTGACATA ATCCTGAAATTCTCTGGGCTGGATTCAAGCGAGTGTCTTAGAGCTATGGTGAAAGTTACACAAATCCAAAACGATTTTCCTATTGGATCATGCATCAATA GAACAAATATTGACAATGAAGATTTTGTTGACTTCTTTTTGAATCATTTTAACTGGGCTGTGTTTGGGAATGAGTTGAAGTGGTATTGGACTGAACCACA AAAGGGTAATTTCAATTACAAAGATGCTGATGATATGTTAGACTTATGTCAGAAGAACAACATAAACACACGTGGTCATTGTATCTTCTGGGAAGTAGAT GGCACTGTTCAACAATGGATTAAATCACTTAATAAAACTGATTTAATGACAGCTGTCCAAAATAGATTATCTGGTTTGCTTACTCGATACAAGGGCAAGT TCAAGCACTACGATGTTAATAATGAAATGTTGCATGGTTCATTTTATCAAGATAAACTAGGTAAGGATATAAGGGGTAATATGTTCAAGACAGCACATCA ATTAGATTCATCTGCTACCCTTTTTGTGAATGATTATCATGTTGAAGATGGGTGTGACACTAGATCATCTCCTGAAAAATATATTCAACAAATTACTGAT TTGCAAGGTCAAGGTGCTCCTGTGGGTGGAATTGGAATTCAAGGTCATATAGATAGCCCTGTGGGGCCTATAGTATGTTCTGCTCTTGATAAATTGGGCA CTCTTGGTTTACCAATCTGGTTTACTGAACTTGATGTGTCTTCTACTAATGAATATGTTAGAGCAGATGATCTTGAAGTTATGCTGAGGGAAGCTATGGC ACACCCTTCAATAGAGGGTATAATGCTATGGGGGTTTTGGGAATTGTTTATGAGCAGAGACAATTCACACTTGGTGAATGCAGAAGGTAGTATCAATGAA GCTGGGAAAAGATTCCTTGCTCTTAAAAAAGAGTGGCTATCTCACTCACATGGTCTTGTTGATGAGCAAGGGTACTTCACCTTCAGAGGTTTTAATGGAA AGTACAACGTGGAAGTTGTGACCTTAACTAAGGAAATTTCCAAGACATTTGTTGTTGTTGACAATGGTGACTCTCCATTGGTGGTATCAATAGATTTATA ATTGGCGTGGATACAAAGGAATTATATTTCTTGTTTATGAAGTGATGCATTTGTGGTTTCATACATTTTTTTAAAATATGGCTTGTTGAATTAAGTAGTT GGTATTTGATGTTATGATTGTTATGCTATATAATTCTTACAATGAAATAAAATAAGATCTATTAAACTAGCTTGTGAATTCAGTTATTTACACTCGTGTA CCTCTTATTCCATCTTTTAAATAAACCAGGGAGAAAGGGAAAAGTAAAACACAAGATCAAAACATGCACATTTACATAAAAGAGTTGGG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_32780; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_244532
| Blastp | Anti-sigma-I factor RsgI6 from Ruminiclostridium with 40.46% of identity |
|---|---|
| Blastx | Anti-sigma-I factor RsgI6 from Ruminiclostridium with 40.34% of identity |
| Eggnog | NA(ENOG41123G8) |
| Kegg | Link to kegg annotations (Cthe_2119) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019416622.1) |
| Pfam | Carbohydrate binding domain (PF02018.16) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |