| Id Trinity | FTRINITY_DN53328_c5_g2_i3 |
|---|---|
| Name Transcript | Ll_transcript_244534 |
| Sequence | CTCCAAGTACAAGCATCTGGTATCCTTATTGTGTTAGTCATATACTTGTTTAGTGAAGAACTGATCACACATTTGGTCTTCTGGTTAATTATTGTATTGG CTTAGAGGTCTTGTAAGGCTATGGAAAACTTACACTCAGAGGCTAAGGAGATCATGAAGGGAACAAACACTGAAGATGATAATATCATAATAAACCCTGA GTTTGAGGATGGCCTGAATAATTGGTCAGGAAGAGGGTGCAAAATTGTATTGCATGAATCCATGGGTAATGGCAAAATCCTTCCAAAGTCTGGCAAGTTC TTTGCATCTGCAACAGAACGGACACAAAACTGGAATGGAATTCAGCAAGAGATCACGACACGAGTCCAGCGCAAACTGGCCTATGAGGTCACCGCTTTGG TTCGGATATTCGGCAACAATGTCACCACTTCTGATGTACGAGCTACTTTGTATGTTCAAACACCAGATTTTCGAGAGCAGTACATAGGCATTGCCAATGT GCAGGCAACAGATAAAGATTGGACTCAAATGCAGGGGAAGTTCCTTCTAAATGGTTCCCCATCAAAAGTGTTTGTTTATTTGGAAGGTCCCCCTTCAGGC ACAGACATTCTTCTCAATACTTTGGTTATAAAGCATGCTCCTAAAACACCTCCTTCTACACCCCCTGATTTTGAGGATGCTGCATTTGGGATTAATATAA TAGAAAACAGTGATATGGGTAAGGGAACCAATGGATGGTTTCCACTTGGTAATTGTACATTGAGTGTAGGAACTGGTTCTCCACGCATAATTCCAGCAAT GGCAAGAGACTCTCTTGGGCCTCATGAACCCTTAAGTGGGCATTACATACTTGTAACCAACCGTACACAAACATGGATGGGTCCAGCTCAGATGATCACA GAGAAATTGAAACTGTTTCTAACTTACCAAGTATCTGCTTGGGTCAGAATTGGTTCAGGATCCAGTGGGCCTCAGAATGTGAATATTGCTCTCAGTGTTG ATGACCAATGGGTCAATGGAGGACAAGTTGAGGTGGCTGATGGAAAATGGCATGAAATTGGAGGGTCCTTTAGAATTGAAAAGGTGCCATCAAAGGTTAT GGTTTATATCCAAGGTCCTGCTTCTGGTATTGACTTAATGATTGCTGGACTTCAAATTTTCCCTGTTCATAGACAAGCCAGGTTTAGATATTTAAGGATG CAGACAGACAAGGTAACTTCATTCTTTATTCCGAGAGTAAGACTCATCTTAGCCATCATACTTATTACTCACTGAAGACTGAATTAGTGATCCGCAAGCG TGACATAATCCTGAAATTCTCTGGGCTGGATTCAAGCGAGTGTCTTAGAGCTATGGTGAAAGTTACACAAATCCAAAACGATTTTCCTATTGGATCATGC ATCAATAGAACAAATATTGACAATGAAGATTTTGTTGACTTCTTTTTGAATCATTTTAACTGGGCTGTGTTTGGGAATGAGTTGAAGTGGTATTGGACTG AACCACAAAAGGGTAATTTCAATTACAAAGATGCTGATGATATGTTAGACTTATGTCAGAAGAACAACATAAACACACGTGGTCATTGTATCTTCTGGGA AGTAGATGGCACTGTTCAACAATGGATTAAATCACTTAATAAAACTGATTTAATGACAGCTGTCCAAAATAGATTATCTGGTTTGCTTACTCGATACAAG GGCAAGTTCAAGCACTACGATGTTAATAATGAAATGTTGCATGGTTCATTTTATCAAGATAAACTAGGTAAGGATATAAGGGGTAATATGTTCAAGACAG CACATCAATTAGATTCATCTGCTACCCTTTTTGTGAATGATTATCATGTTGAAGATGGGTGTGACACTAGATCATCTCCTGAAAAATATATTCAACAAAT TACTGATTTGCAAGGTCAAGGTGCTCCTGTGGGTGGAATTGGAATTCAAGGTCATATAGATAGCCCTGTGGGGCCTATAGTATGTTCTGCTCTTGATAAA TTGGGCACTCTTGGTTTACCAATCTGGTTTACTGAACTTGATGTGTCTTCTACTAATGAATATGTTAGAGCAGATGATCTTGAAGTTATGCTGAGGGAAG CTATGGCACACCCTTCAATAGAGGGTATAATGCTATGGGGGTTTTGGGAATTGTTTATGAGCAGAGACAATTCACACTTGGTGAATGCAGAAGGTAGTAT CAATGAAGCTGGGAAAAGATTCCTTGCTCTTAAAAAAGAGTGGCTATCTCACTCACATGGTCTTGTTGATGAGCAAGGGTACTTCACCTTCAGAGGTTTT AATGGAAAGTACAACGTGGAAGTTGTGACCTTAACTAAGGAAATTTCCAAGACATTTGTTGTTGTTGACAATGGTGACTCTCCATTGGTGGTATCAATAG ATTTATAATTGGCGTGGATACAAAGGAATTATATTTCTTGTTTATGAAGTGATGCATTTGTGGTTTCATACATTTTTTTAAAATATGGCTTGTTGAATTA AGTAGTTGGTATTTGATGTTATGATTGTTATGCTATATAATTCTTACAATGAAATAAAATAAGATCTATTAAACTAGCTTGTGAATTCAGTTATTTACAC TCGTGTACCTCTTATTCCATCTTTTAAATAAACCAGGGAGAAAGGGAAAAGTAAAACACAAGATCAAAACATGCACATTTACATAAAAGAGTTGGG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_32780; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_244534
| Blastp | Endo-1,4-beta-xylanase A from Thermoanaerobacterium with 22.29% of identity |
|---|---|
| Blastx | Anti-sigma-I factor RsgI6 from Ruminiclostridium with 41.08% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019416622.1) |
| Pfam | Carbohydrate binding domain (PF02018.16) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |