| Id Trinity | FTRINITY_DN53328_c7_g1_i6 |
|---|---|
| Name Transcript | Ll_transcript_244549 |
| Sequence | AATTAATTTCCCACGCAAGAATGAGCGCCACTTAGTTTGAAACACAAATTTAATGAATAAGATCCCCTTCATATAATTCCTTTAGATCCAAAACCTGAAA ATCAAAACCCCTCTCTTCTCAATCTCAATTTCGTTTTCCACTACTCCGTATTCAGATCATGGCAGGAAAAGGAGGGAAGGGGCTTCTTGCAGCGAAAACA ACAGCAGCAGCGAACAAAGATAAAGATAAGGATAAGAAGAGACCCATTTCTCGTTCTTCCCGTGCTGGAATTCAGTTTCCAGTGGGTCGTATCCACAGAC AGCTGAAACAAAGGGTCTCAGCTCATGGACGTGTTGGAGCCACTGCTGCTGTGTACTTGGCTTCCATTCTAGAGTATCTGACTGCTGAGGTTCTTGAACT TGCTGGGAATGCAAGCAAAGATCTCAAAGTGAAGAGAATTACTCCAAGGCATTTGCAACTTGCTATCAGAGGAGATGAGGAACTTGATACTCTCATCAAA GGAACCATTGCTGGTGGTGGTGTTATCCCTCACATTCACAAATCCTTGATCAACAAAACCTCCAAAGAATAATATCTCTGTTTTTTATGTCTGTTTATTT AAACTAGGTTGTGTTTGTTATTTTGACTTCGTCACAGTAGGCTAGGATGCTTTCTTTTTATAATTAGATGTTGGCATATAAGTTGGTAGTAATTTTATGT TGTTTTTTAACTGTTTGAATTTGTTTAGACTGGATTTGTAAGGCTGTTGGATTGATTGCTATACAATGCTTTCTTTAGGGTCTGTGATTTGTTGTCTTGA TTCTTCATATTTGTTTGCTTAGTCTTTGACATGGGTCAACCTTTGAGCACTGTCTATTAAAGTTGGTCATGGTTGAAGGTGAAGGTAGTGTAAAGTAAAA CCAACCATATCAAAATTGATGTGTTCATATGAAAAGGTTGTGGAACTGAAAAGTAGTTGCTGTTAGCTGATCTGTTTTATATTTCATCTTGCTTTGTGGT ATGCTCATTCTTGTTTGCAGAAGATTGAGATCTTTGTTTCTTCAAAACCTTTTTATTCAAAATTTAAAACTATCTATAATTAGGCCTGAAGCCAACAGAA GTTTTGACAATATAAAAGAGGTCTATCCATGTAAGCAATACAGAAGTAAGGCATAATGTTGTCTATGTTTCTGTTTAGGCGACATTACAGTTGAAGAGAT TTGTGTTTTTCTAGGTGTTGACTCGGTCATGTTTAGTTAGGTGTCGTTGTTTCCCCTAGTTCGGCTGTCTGCCAAAGTGTGATCGACAGTTACATAAGTT GGATCTTATTCGTCTAGTAATGACTCGGAACCATGAGTTGTGAGTGTCTGGATGGAACAGTTGTCCGCAATTCAAGTGGTAACACTCTTCATCCAACACT GGATAATATCAAATTTCCATTTTGTAATATTGGCGTTTAATACTGCCAAACGTTTCACTTTATGTAGCAACACTACTTGTGTTAAAGCTTTCATATTGTA GTGCTAAATTTTGATTTGCCAATAGTACCTAATAAAGTTATTCTAAA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_32786; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_244549
| Blastp | Histone H2A variant 1 from Arabidopsis with 94.16% of identity |
|---|---|
| Blastx | Histone H2A variant 1 from Arabidopsis with 96.33% of identity |
| Eggnog | histone h2a(COG5262) |
| Kegg | Link to kegg annotations (AT3G54560) |
| CantataDB | Link to cantataDB annotations (CNT0001879) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019441900.1) |
| Pfam | Core histone H2A/H2B/H3/H4 (PF00125.23) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |