Id Trinity | FTRINITY_DN53331_c0_g1_i3 |
---|---|
Name Transcript | Ll_transcript_244916 |
Sequence | GTAAAAGATAGTATTTTAACTATTATCATAGTTTATATTTGATATATGATATTCTTATGGCAGGTTTATCACTTCTGCTTTACACTTTTCCAGTCTTGTT CATAGCTGTTTTGGGATGTGTCTACCTCCATATAGCTAAAAATACTAATAGTTCCAACATGGGAAGGTGTAATGATGGCAAGAAATGTATATGGAAGCGT CCGGTGCTAGTGAGAGGCCTTCTTGGCATAGTATCTGGCACAGAGCTAGCCTTGTTGTTTATGTTCATTGCTCTCCTTGTTTGGTCCTTTTCAACTTATC TCCACAATGACTTTGCCACAATCACTCACAAATCAGCAGCAAAACTCGGTTTGAAAGTATGGGAGAGGAGATTAGTTAAGACAGGTATAAGATTTGGTCA AGTTGGGAATATATGCTTTGCATTCTTGTTTTTTCCTGTGGCTCGTGCATCCTCATTGCTGCCACTGCTTGGCCTCACATCAGAGAGATGCATCAAGTAC CATATTTGGCTTGGACACATTACCATGACACTTTTCACTCTTCATGGATTTTGTTTCATCATCTTTTGGGTTGTTACCGGCCAAACTTCAAAAATGTTGG AATGGAAAAAAATTGGTATATCAAAAGTGGCTGGAGAGATAAGTTTGCTTTGTGGTTTGTTCATGTGGGTTGCATCCATTCCCCGGGTTAGGCGAAAAAT GTTTGAGCTCTTCTTTTACACTCACCACCTCTACATCTTCTTCATTGTCTTCTTCATCTTTCATGTGGGCATCCACCATGCCTCAATTATGCTCGCGGGT TTATACCTCTTCTTAGTTGATCGTTTCCTAAGGTTTTTGCAATCAAGGCAACAAGTTGGTTTGGTTTCTGCTCGAGTTTTGCCTTGTGAAACTGTAGAAC TTAACTTCTCTAAGGACCATGGTCTGACTTACAATCCTACTAGTATAATGTTCATAAATGTACCAAGCATATCCAACCTGCAGTGGCATCCATTCACCAT TACTTCCCATAGTAACTTTGAGAAAGAAAAGCTTAGTCTAGTCATTAAAAGTGAAGGAACTTGGTCCAAGAAGCTCTACCAGATTCTTTCAACACCATCT TCAATAGATCATCTCAATATCTCTGTTGAAGGTCCTCATGGACCTACATCAACCAATTATACAAGGTATGACACTCTTGTGATGGTTAGTGGAGGCATTG GAATCACACCCTTTGTGTCTATTATCAAGGAGCTAATATATATGAGCACAACATTCAGATACAGAACCCCAAAAATTATGCTAATTTGTGCATTCAAGAA CACTTCATGTCTCTCTTTGCTAGACTTGATCCTCCCAAATTCTTGCACCCCTTATGACATTTCTAGTACTCAAATACAGATTGAAGCCTACATAACAAGA GACAAGAAGCCGAAGCCGGAACCGGATAATTTGATTCAAATTCAATCCATCTGGTTCAAGCCAAATGCAGATGATGCACCAATATCTGCTATGCTAGGTT CACATTGTTGGCTTTGGCTAGCTGCTATAATCACATCCTCCTTCATAATTTTCTTTATCATAATAGGTCTCATTACCCATTATTTCATTTTCCCTAAAGA TCCCAACACAACTAAAATATTTTCCTCCTCTTTGAGGACTTTCATCAACATGTTAGTAATATGTGTGTCCATAGTCATAGTTGCTAGTGCAGCTTTTCTT TGGAACGAGAAACAGAATGCAAAAAAAGCAAAGAAAATTCAGAACATGGAAGGTTCATCACCATCTTCATTGTCACCAGATTTAAAGAATAATGTTGCAG ATAGAGAATTGGAAAGCCTTCCACAACAATCCCTTGCTGAAGCTACTAATGTGCATTATGGTGCAAGACCTGATCTAAGAAGACTATTATCTGAAATCAA AGGGTCAAGTGTTGGAGTTCTTGTTGCTGGACCCATGAAAATGAAGCAGGAGGTGGCAGCTATTTGCTCATCTGATTTAGCTGAAAATCTGCATTTTGAG TCCTTTAGCTTTGGCTGGTGACTTTACTCTTACTCTTACTTAGGGTGTTAAAGGTTAAAGTTCCACAATTCCACCTCTGAATTGAGCTACTAGGATTAGT GGTCTCAGGTAGCATATTTTAACTTTAGTCAAAAAAATATATATTCAATTTGGTGTTAATTAGTTTTCCAACAATACTTGGGTCCTGATTGTTACTTGAT ATTAACACCCAAGTCATTGTGTATTTCTAGGGTGTTTTTCTGATTTCTAATATATCAAGGTAAATGAAATTTACATGATTTATGGTATATGGTGTAAGAT ACCGCTAGATCTTAGGATGACTAAAAGGTCCAAGTTATGACTAAAAGAAACAATCATGTATATCGAAAGAAATTACTTTCTTC BLAST |
Tissue | flowers |
Gene name | LI_gene_32808; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_244916
Blastp | Ferric reduction oxidase 2 from Arabidopsis with 54.64% of identity |
---|---|
Blastx | Ferric reduction oxidase 2 from Arabidopsis with 54.49% of identity |
Eggnog | NADPH Oxidase(ENOG410XNZY) |
Kegg | Link to kegg annotations (AT1G01580) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019463880.1) |
Pfam | Ferric reductase like transmembrane component (PF01794.18) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |