Id Trinity | FTRINITY_DN53336_c0_g3_i3 |
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Name Transcript | Ll_transcript_247200 |
Sequence | CTTGCATCTCTTCTTTCTCGCTCTTTAATTTCTGTCACTTTCATATTTCTTACAACATCAGAAGTAAGAAAGAAAAATAAAAAAGAAACTTACTATTCAT GTTCTTGGATTTGAAGTTCAAACTTCAAACTAAGATCTATTCTCTATTTTCAGACACATAATTTTTTTCTCTAATCTCAAATCCAAATGTCTTAGTTCTT TCTTTCTTACAAAAACAACACCCTTTTCTCATGCTTCTGTTCTAATCTTTTTATATAATTAAATATTAATTTTATATTATAATGGATTCACTCTTCTCTT CTCAAAACCCTACTAACCCCACTTTCCTTCCTCCACCGCCCGGAATCCCTTTCCCCGCCGCAATAACCACCGCCACCGTACCCAATGGTGTAACCACCCC CCCCAGAACCCCAACACCGATTCTGATACCAAAGCTTGAACCTTTTGAGGGATGGGTTGAGACCCAAAAGACCCAAGAGACTCAACAACAAACCACTTTT TCAAATGGGCCCCACACTCTTCTCAACCTATTTGGTGATGAAACCCTAGCTTCTGCTTCTTCGGACAAAAACGGCACCGTTTCGGACTTCAACCAAATTG CTGAGGTTTTTAGGACTGCATTCTCTAAGGGTTTGCAGCAATTTCAAGTGCCTAAAGAAGAAAACGACACCGTTTTGGACCCTGAGTCTGGTGCAATTGT TCCCGTGCCACCGCCGGAGTATAATAGTAACAGCAGCAACAAGGACTCTCCGGGGGCGGTGGCACTATCCACGCCACGAAGCAGAGTGAAGGAACTTGTG AGGGTCACTGATTTTGGGGGGATCAAGGAGCAGCGGCATTTTCGCGAGGTGGTGAGGAAGACTAGGATGATTTATGATTCGTTGCGGGTGTTATCGACAG TGGATGAGGAGAGGAGGGTGGAATTGGATCATAGGAGGGTGAGAGCAGACTTGAGAGCTTCTAATTTGATGAGGAATTGTGGGTTGTGGCTTAATCGCGA TAAGAGGATCGTTGGCGCGATTCCGGGTGTTTGCATTGGTGATGTGTTCCTTTATAGGATGGAATTGTGTGTGGTTGGGTTACATGGTCAACCACAAGCT GGGATTGATTATCTTCCTGCTAGTTTTAGTGCCAATGGTGAACCAATAGCTACTAGTGTTATAGCTTCTGGTGGATATGAGGATGATCTTGATGAAGGTG ATGTTATCATCTATTCGGGTCATGGAGGCCAAGACAAGCATTCTAAGCAAGTTTTTCATCAGAAGTTGGAAGGAGGGAACCTTGCAATGGAGAGAAGTAT GCATTATGGGATTGAAGTGAGGGTTATTCGGGGGGTTCGGTGTGAAGGAACTGCATCGGCTTCGGGTAAGTTGTATGTTTATGACGGGCTGTATAAAATT GTTCATTGCTGGTTTGATGTTGGGAAGTCTGGTTTTGGTGTTTTTAAGTATAAGTTGTGTAGGATTGATGGGCAAGCTAAGATGGGTAGTTCAGTGCTGA AAGAAGCTAATAAGCTTAGGAAAGATCCATTGAGTTTTAAACCTATGTGTTGCCTTTCTCTTGATATTTCGATCAATAAGGAGTATGTCCCGGTTCGTCT TTTTAATGACATAGATCAGAACAATGACCCTCTCTATTACGAGTATCTGTCGAGAACAACTTTTCCCGACTTTGTGTTTCATCAAAGTGGAAGAGCTACA GGTTGTGAGTGTGTGGGCGGTTGTGTTGATGGTTGTTTTTGTGCTATGAAAAATGGAGGTGAATTTTCATATAATCAAAATGGGGTTCTCTTGAGAGGGA AGCCTGTAATTTTTGAATGTGGTCCTTTTTGCTGCTGTCCCCCTCATTGTCGGAACCGTGTTACACAGAAGGGGCTGAAACATAGGTTGGAAGTATTTAG GTCTAGGGAAACTGGTTGGGGAGTTAGGTCTTTGGACCTTATTCAAGCTGGTGCTTTTATCTGTGAGTACACAGGGGTTGTCCTGACTAAGGAGCAAGCC GAAATTTTGTCGATGAATGGCGATTCATTGATATATCCGAATCGGTTTTCTAATAGGTGGACGGAGTGGGGGGACTTATCTCTGATAGACTCCAATTACA TGCGTCCATCATATCCATCAATTCCTCCTTTAGATTTTGCTTTGGATGTGTCAAGAATGAGGAATGTCGCTTGCTATATGAGTCATAGTTCGACTCCAAA TGTGTTCGTTCAGTTCGTTCTCTATGATCACAATAATTTGATGTTCCCGCACCTAATGCTATTTGCAATGGAGAGCATCCCGCCAATGAGAGAGCTCAGC CTTGATTACGGGGTGGCTGATGAGGTGGCAGGGAAGCTCTCTATCTGTAACTGAATTATTTTGGAAGGTTCCTACATTGTTTAATATTTTGAAGCTGAGT TTTGGGCAATGTTCACCGAGAATTCAAATCGACGAACCCTAACTTTCAGAAAGTTCCGACCTCACCTGATTTATAATGAAACGTCGAAATTGCTTGCTAT ATAACTGTCAGGTTATCAAATATGATGACTCAATATCGTTTTATATTTTGGCTAATACATGGCGACCATGTGTCAGGAAGATAAGGAAATGGAGTTTCTC CTATCTGATTAATCTTGAACAAAGCATATTTTGATATATGATGACCAGATTTTGTAAGCAATTAGTGCAGCTGTATTAACTTTTATTTGGGTACTTGTAT ATAATAATGTAAGCTCAGCTTGTAATAACAGATGATATGTTATAGTAGTGGTTAGAAATGATAGATGCCCATTTGAAATGAGCATTTTATTGTTTTACAA GTATACAAGTCCATATTATTGTTATTCAGATTCCAAGGTATAGCAAATGCTGTTAATCATATTGTTTGATGAAATGCAATCTATGATGCATTTGCTAAGG TAATTGTTATGAGGAATGGACAAGTTGGTTGATATATATGACCCAATGGTAGTTGC BLAST |
Tissue | flowers |
Gene name | LI_gene_32845; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_247200
Blastp | Histone-lysine N-methyltransferase family member SUVH9 from Arabidopsis with 59.28% of identity |
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Blastx | Histone-lysine N-methyltransferase family member SUVH9 from Arabidopsis with 58.93% of identity |
Eggnog | ubiquitin-like with PHD and ring finger domains 2, E3 ubiquitin protein ligase(COG3440) |
Kegg | Link to kegg annotations (AT4G13460) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019461893.1) |
Pfam | SAD/SRA domain (PF02182.16) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |