Id Trinity | FTRINITY_DN53345_c1_g2_i3 |
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Name Transcript | Ll_transcript_246562 |
Sequence | CTTATTAAGAAACAAAAACCCTGGCCATAGCTTCTTCCACCTTTCTCTTCTATTCTCTGTCTCGCCTCCTTCACTTGAAACGACACCGTTTACTCACTCA ACCATTCACCTTCGAACGAAGATGGCACATAAACCGGGTTCGGTTCATGATTTCGAAGCACTTCGAGAATTGTTGAAACCTCACATAGAATCCTTCAATT ACATGGTCGATCAAGGTTTTGCAAACCATGTTTCAACACATTGCTCCGGTTCAACTCATCGACCCTTTCACCAACACCAACCTTAGAATTTGGTTGGATC ATCCGGTGCTGTATGGGCCACAGAAGGAACGGAATTCAAAGCTGCGGAAGGATACCTTATTTCCATTTGAATGTAGACAGGCAAAGATTTCATATACAGG AAAGTTCACTGCAGATGTTTGCTTTCAGTATGGTGGCGGGGCTATTATAAGAGAAAATATTGATTTTGGGCAGTTTCCCATAATGCTACAGGTTCGATCT ACTGGAACAATTGATCAGGTAACCAGACAGCCAATAAAAGGACGAAAGCGTGGTGGTGGAATTCGATTTGGAGAAATGGAAGTGATTCTCTACTTGCTCA TGGAGCAGCATATCCTTTGCATGATAGGTTGCATACCTGTTCTGATCATCACATTGCTGATGTATGTTCCCTATGCGGAAGCATGCTCAACACAACTTTT ATCCAGCCACTAAAGTGGCCAGTGCGAGAGATTGGCAGGCTACCCCCAGGAAGAGCTCCGAAAAAGGTCACTTGCCATGCTTGCAGAACAAGTAAGGGTA TGGAGACGGTCGCCATGCCCTATGTATTTAGATATTTGGCAGCAGAGTTAGCAGCAATGAACATAAAAATGACTCTTAAGCTGAGTAATGGAAGTGGAGC CTGATATGATTGAAAGTCTAGTCTCATTGGCTGTGACAACAAATGCTTAAGTTGATTGGATGTGCTAAGGTTATCATTTGCATACAAGAATTTGTTATGG AACTCAGATCCTTGCTCTCATCATGGGGACTTCAAATTTTCCCAGCCTTAATCTGAATTGTTGGCTGCTTTTAACTGAGCCTGATAGTTGGGCTAGAATT GAGGTTCTTCCATGTTGTCAATGTAGAAATTCATGGTTTTAAAAAGTAGGATGAGATTCCAGATTTTGATGTATCCTTGTAACTTTTGAAGGGGTAGATA GGTTTTAGCATATTGTGGTATGTATCATAAACCTTGAATTTTGGTGAACTCATCTTTATTGTTTGAGAAGTATGCATACTTCCCCTATTATTTTTTTCAT ATGAAATTGAATATGATAAGTCTCCATCTAAGGTGTGCAAGACATTGAGTATGGTTGAAATTTTATATTTTTAGAATGATCAAG BLAST |
Tissue | flowers |
Gene name | LI_gene_32971; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_246562
Blastp | DNA-directed RNA polymerase I subunit 2 from Arabidopsis with 57.14% of identity |
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Blastx | DNA-directed RNA polymerase I subunit 2 from Arabidopsis with 73.83% of identity |
Eggnog | DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (By similarity)(COG0085) |
Kegg | Link to kegg annotations (AT1G29940) |
CantataDB | Link to cantataDB annotations (CNT0002751) |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019449317.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |