| Id Trinity | FTRINITY_DN53393_c2_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_246377 |
| Sequence | AACATAAATTACTTATTTTTGGGCCGAGCGAGGGTAACTATTGAGCACCAAACCGTATCGCATGGCATACAAACCCCGCGCTCGTCGCTGTCATTGAAAC ACTTTTTCTCTCTTCACTCTTTCATTTCTCACTCCAAAACCCCTTCCTTCAAATACCCCTCTCTCTTCTCTAGGGCACAGAAACAGTACAATACAATGAA ACGCGACTTCTACGAAATCTCCGAAGACGAATGGGAGAACCACAACACCTCTTTCAAACCCTCTCGTGTTCTCAAAGCACCGAGGCTTTCTTCTTCCTCT TCCTCCTCTTCGCGGCTTCCGCCACCACCAATCGAGTCCTTCGCTTTTGGTTCCAATAACAAGCCTGAGGTTTCCGATCACGGCGACGACGATTGCGTGG AAATCGCGCCGAATTCGACACTTTTTCGGGAGAGCAACGACAGCCTGGACGACCTGGAGGACGAAGACGTTGATAATTCGACTGCAGCCCCCGCGCCGAA CCGAGGCCGCCGGTTTATAATCGATGACGAAGATGATGACGTCAGCGACAGGGATGTTGCGGAAGTGTATGAGATAGAGTCCACTGAGGAGGAAGTGGAA GAGGTTGAGGATTTGAATGAAGGTGATGTGGTTGGTAAAGCTTTGCATAAGTGCTCGAAAATTTCGACGGAGCTGAGAAAGGAACTGTTTGGTTCTTCTG GTACCGCTTGTGAAAGGTACTCCGAGGTGGAATCTTCTTCAGTGAAAATTGTCACTCAGGAGGATGTTGATGAAGCGTGCGGGTCTGAGGATTCGGATTT TCAGCCTCTGCTGAAGCCGTATCAGCTAGTTGGTGTCAATTTTTTGCTTCTGTTGCATCGGAAGGGTATCGGAGGAGCCATATTGGCAGATGAAATGGGT CTTGGCAAAACAGTTCAGGCTATCACATATTTAACTTTGTTGAAACATTTGCACGATGATCCTGGTCCTCATCTTATAGTATGTCCCGCTTCTGTTTTGG AAAACTGGGAAAGGGAACTAAAAAAGTGGTGTCCAACTTTCTCTGTTCTTCAATATCATGGGGCTGGACGAGCAGCATATTGCAAGGAGTTGAACTCCCT GTCCAAAGCAGGATTGCCTCCTCCATTTAACGTCCTTCTTGTGTGTTATTCACTTTTTGAACGACACAGTCCGCAGCAGAAAGATGATCGTAAAGTTCTG AAGCGTTGGAGGTGGAGCTGTGTGCTGATGGATGAGGCACATGCTTTGAAGGACAAAAATAGCTATAGGTGGAAAAATCTGATGTCTGTTGCACGAAACG CTAACCAGCGCTTGATGCTGACTGGGACACCTCTTCAGAATGACCTACATGAGTTATGGTCATTGTTGGAGTTTATGCTGCCTAATATTTTTGATAGTGA AGATGTTGACTTAAAAAAGTTACTAAATGCAGAAGATAGAGATTTAATTGGTCGTATGAAGTCCATCTTGGGGCCATTTATTTTGCGGCGTCTAAAATCT GATGTGATGCAGCAACTTGTTAAAAAAATACAGCAGGTTGAATATGTTGTTATGGAAAAGCAACAAGAACATGCTTATAAGGAAGCCATTGAGGATTATC GTGCTGTTTCACAAGCTCGGATTGCAAAGTGTTCCGACCTTAACTCCAAAAATGTTCTTGAAGTCCTTCCTAAACGGCAGATAAATAATTATTTTGTTCA GTTCCGCAAGATTGCGAACCACCCCTTGTTGATAAGGCGGATCTATAATGATGAGGATGTCATTCGCTTTGCAAGGAAGCTACATCCTGTAGGTGCTTTT GGCTATGAATGTACATTAGACAGAGTTATAGAGGAACTTAAAAGTTACAATGATTTCTCTATTCACCGGCTTCTACTTCACTATGGTGTCAAGGATAAAA AGGGGATTCTTTCAGATAAGCATGTTATGCTTTCTGCAAAATGTCGGTCCCTATCAAAACTTCTTCCTTCACTGAAGAAGGGTGGCCATCGTGTTTTGAT CTTTAGTCAGTGGACATCAATGCTTGACATATTGGAGTGGACTTTGGATGTCATTGGGTTTACCTACAAACGGCTTGATGGAAGTACACAGGTAGCAGAG AGGCAAACAATAGTGGATACATTCAATAATGATACTTCCATATTTGCATGCTTGCTTTCCACAAGAGCTGGAGGTCAAGGCTTGAACTTAACCGGAGCTG ATACTGTCGTAATTCATGACATGGATTTTAATCCACAGATTGATAGACAAGCAGAAGACCGTTGTCATCGAATTGGTCAAACAAAGCCTGTAACCATATA TCGGTATTCGTCCATCCTTTCTTTTTCACTCACATGTTTATTAGCAGAAATATTAAACCTTTTAAATTGGATCTATTTTAATCTTTTGCTGGAGTATTTT ATCATGATGTATTCCACTGTAGGCTGGTGACCAAGGGAACAGTTGATGAAAACGTATACGAGATTGCAAAGAGAAAGCTGGTATTGGATGCTGCTGTCCT TGAGTCCATGGATGTGGTTAATGAAGGTGACATGCCTGAGAAGACCATGGGAGAGATATTGTCTGCAATTTTGTTGAGTTAAAAATTGAGCCTAAGAAAA CAATTTACTGAAGAGTTAAATGGGGTATACCGAAAGTGTAAAGTTTTATACAATGAGCCTATCATTCATCATTAATGTGTATGACTTTTATTTAACATTC AGTGATTGTCCGCATGTCAATGGTGGATGATGTGCTGATAGTGCAAAAATCTTTACACCATCAATGCATAACCTATTTTCTCTTTGCTCCACCCCTTTTT TCTTCTTTGTAGGTTTGCACGAATTATATTTCTGATTCTGATCTTGTATTAGCCATATGATGATTTCAGAGTAAAGGGAATTGGCCGCAGGTGTACATTT AGCCTTAATTAATCCATGTATTGATGACAGTGAATAATCATTGTCGGTATCAATAGGAGAGTTAGTATAAATAAGTCACTGTAGAAGTTAGCAATTTTTT TGAACTCTTGTTGGAGCCCCAATGATGAAAGCTCCCCCTTGCATTTTAAATTTTCCACATTCCTATCTTTTCCTGTTATACTTTCTGCTATTTTCATTGT TCCATTTGCTGGAAAGAATGTTCTAGTTCTGTGGTGGCTTGATAGAATATGTG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_33351; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_246377
| Blastp | Protein CHROMATIN REMODELING 19 from Arabidopsis with 71.21% of identity |
|---|---|
| Blastx | Protein CHROMATIN REMODELING 19 from Arabidopsis with 72.65% of identity |
| Eggnog | helicase activity(ENOG410XNUT) |
| Kegg | Link to kegg annotations (AT2G02090) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019461602.1) |
| Pfam | SNF2 family N-terminal domain (PF00176.22) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |